FFCP PHASE1:Hg19::chr12:132863063..132863075,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=50614|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4131|TSSclassifier=S|UniProt=|association_with_transcript=-6bp_to_ENST00000540493_5end|description=CAGE_peak_4_at_GALNT9_5end|id=chr12:132863063..132863075,-|ontology_enrichment_celltype=CL:0000077!1.03e-19!19;CL:0002150!1.61e-08!3;CL:0000861!1.61e-08!3;CL:0000076!7.52e-08!62;CL:0000066!3.60e-07!254;CL:0002097!8.13e-07!2|ontology_enrichment_celltype_v019=CL:0000077;1.94e-31;19!CL:0000322;1.94e-17;3!CL:0000082;8.46e-11;19!CL:0002097;1.09e-07;2|ontology_enrichment_celltype_v019_2=CL:0000077,2.08e-31,19;CL:0000322,2.11e-17,3;CL:0000076,7.08e-12,63;CL:0000082,8.46e-11,19;CL:0000213,6.15e-10,58;CL:0000215,6.15e-10,58;CL:0000066,2.60e-09,253;CL:0002097,1.05e-07,2|ontology_enrichment_development_v019=UBERON:0001041;2.12e-10;30!UBERON:0008947;3.82e-07;29|ontology_enrichment_disease=DOID:305!1.41e-09!106;DOID:3908!4.47e-09!5;DOID:0050687!1.38e-08!143;DOID:1324!2.52e-08!15;DOID:0050615!9.85e-08!16;DOID:3910!4.73e-07!2|ontology_enrichment_disease_v019=DOID:3910;1.27e-25;2!DOID:3111;3.08e-14;1!DOID:3603;3.08e-14;1!DOID:1324;1.31e-13;15!DOID:6193;1.42e-13;1!DOID:0050615;8.91e-13;16!DOID:3908;7.51e-11;5!DOID:1325;5.28e-08;7!DOID:3904;5.28e-08;7!DOID:3350;1.99e-07;2!DOID:4929;1.99e-07;2|ontology_enrichment_disease_v019_2=DOID:3910,1.44e-25,2;DOID:3111,3.08e-14,1;DOID:3603,3.08e-14,1;DOID:6193,1.25e-13,1;DOID:1324,1.31e-13,15;DOID:0050615,8.91e-13,16;DOID:0050687,4.86e-11,143;DOID:3908,7.89e-11,5;DOID:162,4.08e-10,235;DOID:14566,7.24e-10,239;DOID:305,1.49e-08,106;DOID:1325,5.47e-08,7;DOID:3904,5.47e-08,7;DOID:3350,1.87e-07,2;DOID:4929,2.12e-07,2|ontology_enrichment_uberon=UBERON:0002394!4.31e-07!4;UBERON:0003928!4.31e-07!4;UBERON:0004903!4.73e-07!2;UBERON:0002173!4.73e-07!2;UBERON:0002186!4.73e-07!2|ontology_enrichment_uberon_v019=UBERON:0004903;1.27e-25;2!UBERON:0002173;1.27e-25;2!UBERON:0002186;1.27e-25;2!UBERON:0000058;4.51e-20;10!UBERON:0004821;1.94e-17;3!UBERON:0007499;1.94e-17;3!UBERON:0003215;1.94e-17;3!UBERON:0010368;1.94e-17;3!UBERON:0009911;1.94e-17;3!UBERON:0002299;1.94e-17;3!UBERON:0006524;1.94e-17;3!UBERON:0008874;1.94e-17;3!UBERON:0002169;1.94e-17;3!UBERON:0004894;1.94e-17;3!UBERON:0004913;1.42e-13;1!UBERON:0003703;1.42e-13;1!UBERON:0001174;1.42e-13;1!UBERON:0004914;1.42e-13;1!UBERON:0002394;2.14e-13;4!UBERON:0003928;2.14e-13;4!UBERON:0009856;2.50e-13;4!UBERON:0004802;8.46e-11;19!UBERON:0000115;8.46e-11;19!UBERON:0002048;2.34e-09;22!UBERON:0004807;2.34e-09;22!UBERON:0000117;2.34e-09;22!UBERON:0000171;2.34e-09;22!UBERON:0000170;2.34e-09;22!UBERON:0002294;4.83e-08;7!UBERON:0001173;4.83e-08;7|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.44e-25,2;UBERON:0002173,1.44e-25,2;UBERON:0002186,1.44e-25,2;UBERON:0004821,2.11e-17,3;UBERON:0003215,2.11e-17,3;UBERON:0010368,2.11e-17,3;UBERON:0009911,2.11e-17,3;UBERON:0002299,2.11e-17,3;UBERON:0006524,2.11e-17,3;UBERON:0008874,2.11e-17,3;UBERON:0002169,2.11e-17,3;UBERON:0004894,2.11e-17,3;UBERON:0004913,1.61e-13,1;UBERON:0003703,1.61e-13,1;UBERON:0001174,1.61e-13,1;UBERON:0004914,1.61e-13,1;UBERON:0004802,8.46e-11,19;UBERON:0000115,8.46e-11,19;UBERON:0000058,1.09e-10,19;UBERON:0002048,2.34e-09,22;UBERON:0000117,2.34e-09,22;UBERON:0000171,2.34e-09,22;UBERON:0000170,2.34e-09,22;UBERON:0005597,2.34e-09,22;UBERON:0000118,2.34e-09,22;UBERON:0002394,3.14e-09,6;UBERON:0003928,3.14e-09,6;UBERON:0007499,3.56e-08,25;UBERON:0009856,7.21e-08,26;UBERON:0004807,2.15e-07,28|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.656029291399411,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27308917445131,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.269605053441981,3.22238114416096,0,0,0,0,0,0,0,0,0,0,0,1.27126825146383,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=50614 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4131 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-6bp_to_ENST00000540493_5end | |||
|description=CAGE_peak_4_at_GALNT9_5end | |||
|id=chr12:132863063..132863075,- | |||
|ontology_enrichment_celltype=CL:0000077!1.03e-19!19;CL:0002150!1.61e-08!3;CL:0000861!1.61e-08!3;CL:0000076!7.52e-08!62;CL:0000066!3.60e-07!254;CL:0002097!8.13e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.94e-31;19!CL:0000322;1.94e-17;3!CL:0000082;8.46e-11;19!CL:0002097;1.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.08e-31,19;CL:0000322,2.11e-17,3;CL:0000076,7.08e-12,63;CL:0000082,8.46e-11,19;CL:0000213,6.15e-10,58;CL:0000215,6.15e-10,58;CL:0000066,2.60e-09,253;CL:0002097,1.05e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.12e-10;30!UBERON:0008947;3.82e-07;29 | |||
|ontology_enrichment_disease=DOID:305!1.41e-09!106;DOID:3908!4.47e-09!5;DOID:0050687!1.38e-08!143;DOID:1324!2.52e-08!15;DOID:0050615!9.85e-08!16;DOID:3910!4.73e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3910;1.27e-25;2!DOID:3111;3.08e-14;1!DOID:3603;3.08e-14;1!DOID:1324;1.31e-13;15!DOID:6193;1.42e-13;1!DOID:0050615;8.91e-13;16!DOID:3908;7.51e-11;5!DOID:1325;5.28e-08;7!DOID:3904;5.28e-08;7!DOID:3350;1.99e-07;2!DOID:4929;1.99e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.44e-25,2;DOID:3111,3.08e-14,1;DOID:3603,3.08e-14,1;DOID:6193,1.25e-13,1;DOID:1324,1.31e-13,15;DOID:0050615,8.91e-13,16;DOID:0050687,4.86e-11,143;DOID:3908,7.89e-11,5;DOID:162,4.08e-10,235;DOID:14566,7.24e-10,239;DOID:305,1.49e-08,106;DOID:1325,5.47e-08,7;DOID:3904,5.47e-08,7;DOID:3350,1.87e-07,2;DOID:4929,2.12e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002394!4.31e-07!4;UBERON:0003928!4.31e-07!4;UBERON:0004903!4.73e-07!2;UBERON:0002173!4.73e-07!2;UBERON:0002186!4.73e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.27e-25;2!UBERON:0002173;1.27e-25;2!UBERON:0002186;1.27e-25;2!UBERON:0000058;4.51e-20;10!UBERON:0004821;1.94e-17;3!UBERON:0007499;1.94e-17;3!UBERON:0003215;1.94e-17;3!UBERON:0010368;1.94e-17;3!UBERON:0009911;1.94e-17;3!UBERON:0002299;1.94e-17;3!UBERON:0006524;1.94e-17;3!UBERON:0008874;1.94e-17;3!UBERON:0002169;1.94e-17;3!UBERON:0004894;1.94e-17;3!UBERON:0004913;1.42e-13;1!UBERON:0003703;1.42e-13;1!UBERON:0001174;1.42e-13;1!UBERON:0004914;1.42e-13;1!UBERON:0002394;2.14e-13;4!UBERON:0003928;2.14e-13;4!UBERON:0009856;2.50e-13;4!UBERON:0004802;8.46e-11;19!UBERON:0000115;8.46e-11;19!UBERON:0002048;2.34e-09;22!UBERON:0004807;2.34e-09;22!UBERON:0000117;2.34e-09;22!UBERON:0000171;2.34e-09;22!UBERON:0000170;2.34e-09;22!UBERON:0002294;4.83e-08;7!UBERON:0001173;4.83e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.44e-25,2;UBERON:0002173,1.44e-25,2;UBERON:0002186,1.44e-25,2;UBERON:0004821,2.11e-17,3;UBERON:0003215,2.11e-17,3;UBERON:0010368,2.11e-17,3;UBERON:0009911,2.11e-17,3;UBERON:0002299,2.11e-17,3;UBERON:0006524,2.11e-17,3;UBERON:0008874,2.11e-17,3;UBERON:0002169,2.11e-17,3;UBERON:0004894,2.11e-17,3;UBERON:0004913,1.61e-13,1;UBERON:0003703,1.61e-13,1;UBERON:0001174,1.61e-13,1;UBERON:0004914,1.61e-13,1;UBERON:0004802,8.46e-11,19;UBERON:0000115,8.46e-11,19;UBERON:0000058,1.09e-10,19;UBERON:0002048,2.34e-09,22;UBERON:0000117,2.34e-09,22;UBERON:0000171,2.34e-09,22;UBERON:0000170,2.34e-09,22;UBERON:0005597,2.34e-09,22;UBERON:0000118,2.34e-09,22;UBERON:0002394,3.14e-09,6;UBERON:0003928,3.14e-09,6;UBERON:0007499,3.56e-08,25;UBERON:0009856,7.21e-08,26;UBERON:0004807,2.15e-07,28 | |||
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|short_description=p4@GALNT9 | |||
}} |
Revision as of 21:48, 10 September 2013
Short description: | p4@GALNT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GALNT9_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000540493_5end |
EntrezGene: | GALNT9 |
HGNC: | 4131 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.08e-31 | 19 |
pneumocyte | 2.11e-17 | 3 |
squamous epithelial cell | 7.08e-12 | 63 |
epithelial cell of lung | 8.46e-11 | 19 |
lining cell | 6.15e-10 | 58 |
barrier cell | 6.15e-10 | 58 |
epithelial cell | 2.60e-09 | 253 |
cortical cell of adrenal gland | 1.05e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.44e-25 | 2 |
alveolar duct | 1.44e-25 | 2 |
bronchiole | 1.44e-25 | 2 |
pulmonary alveolus epithelium | 2.11e-17 | 3 |
alveolus | 2.11e-17 | 3 |
pulmonary lobule | 2.11e-17 | 3 |
lobule | 2.11e-17 | 3 |
alveolus of lung | 2.11e-17 | 3 |
alveolar system | 2.11e-17 | 3 |
pulmonary acinus | 2.11e-17 | 3 |
alveolar sac | 2.11e-17 | 3 |
alveolar wall | 2.11e-17 | 3 |
hepatopancreatic ampulla | 1.61e-13 | 1 |
extrahepatic bile duct | 1.61e-13 | 1 |
common bile duct | 1.61e-13 | 1 |
duodenal papilla | 1.61e-13 | 1 |
respiratory tract epithelium | 8.46e-11 | 19 |
lung epithelium | 8.46e-11 | 19 |
duct | 1.09e-10 | 19 |
lung | 2.34e-09 | 22 |
respiratory tube | 2.34e-09 | 22 |
respiration organ | 2.34e-09 | 22 |
pair of lungs | 2.34e-09 | 22 |
lung primordium | 2.34e-09 | 22 |
lung bud | 2.34e-09 | 22 |
bile duct | 3.14e-09 | 6 |
digestive system duct | 3.14e-09 | 6 |
epithelial sac | 3.56e-08 | 25 |
sac | 7.21e-08 | 26 |
respiratory system epithelium | 2.15e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.44e-25 | 2 |
cystadenocarcinoma | 3.08e-14 | 1 |
mucinous cystadenocarcinoma | 3.08e-14 | 1 |
epithelioid sarcoma | 1.25e-13 | 1 |
lung cancer | 1.31e-13 | 15 |
respiratory system cancer | 8.91e-13 | 16 |
cell type cancer | 4.86e-11 | 143 |
non-small cell lung carcinoma | 7.89e-11 | 5 |
cancer | 4.08e-10 | 235 |
disease of cellular proliferation | 7.24e-10 | 239 |
carcinoma | 1.49e-08 | 106 |
bronchus cancer | 5.47e-08 | 7 |
bronchogenic carcinoma | 5.47e-08 | 7 |
mesenchymal cell neoplasm | 1.87e-07 | 2 |
tubular adenocarcinoma | 2.12e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.