FFCP PHASE1:Hg19::chr11:76476813..76476816,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C583|description=CAGE_peak_at_chr11:76476813..76476816,+|id=chr11:76476813..76476816,+|ontology_enrichment_celltype=CL:0002057!4.71e-116!42;CL:0000860!8.81e-108!45;CL:0002194!1.99e-87!63;CL:0000576!1.99e-87!63;CL:0000040!1.99e-87!63;CL:0000559!1.99e-87!63;CL:0002009!1.60e-84!65;CL:0000766!2.07e-79!76;CL:0000839!5.63e-78!70;CL:0000557!8.94e-77!71;CL:0000763!2.43e-51!112;CL:0000049!2.43e-51!112;CL:0002087!2.74e-50!119;CL:0000738!1.14e-48!140;CL:0002031!6.33e-48!124;CL:0000037!5.47e-38!172;CL:0000566!5.47e-38!172;CL:0002032!6.39e-38!165;CL:0000837!6.39e-38!165;CL:0000988!2.05e-35!182;CL:0000134!1.60e-13!358;CL:0002320!4.38e-13!365;CL:0000219!1.53e-11!390;CL:0000048!1.07e-09!430;CL:0000723!1.95e-09!436;CL:0000034!4.26e-09!444|ontology_enrichment_celltype_v019=CL:0000860;2.88e-129;33!CL:0002057;2.88e-129;33!CL:0000473;2.32e-105;39!CL:0000234;2.32e-105;39!CL:0000576;3.36e-58;48!CL:0000766;1.02e-36;69!CL:0000763;1.16e-20;100!CL:0002087;2.36e-15;104!CL:0000738;3.14e-11;136!CL:0000988;1.47e-07;177|ontology_enrichment_celltype_v019_2=CL:0000473,9.82e-113,48;CL:0000234,9.82e-113,48;CL:0000860,2.67e-112,42;CL:0002057,2.67e-112,42;CL:0002194,3.37e-89,59;CL:0000576,3.37e-89,59;CL:0000040,3.37e-89,59;CL:0000559,3.37e-89,59;CL:0002009,3.68e-86,61;CL:0000839,2.34e-79,66;CL:0000557,4.06e-78,67;CL:0000766,1.62e-77,72;CL:0000763,3.09e-50,108;CL:0000049,3.09e-50,108;CL:0002087,1.08e-43,115;CL:0002031,1.13e-41,120;CL:0000738,6.52e-39,136;CL:0002032,4.23e-32,161;CL:0000837,4.23e-32,161;CL:0000037,1.49e-30,168;CL:0000988,9.66e-29,177;CL:0000134,1.06e-11,354;CL:0002320,2.29e-11,361;CL:0000219,3.45e-10,386;CL:0000048,9.62e-09,427;CL:0000723,1.52e-08,433;CL:0000034,2.76e-08,441|ontology_enrichment_development_v019=CL:0002057;5.54e-82;42!CL:0000049;2.43e-15;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.65e-67!80;UBERON:0001474!4.47e-62!86;UBERON:0004765!1.07e-51!101;UBERON:0001434!1.07e-51!101;UBERON:0002390!4.11e-51!102;UBERON:0003061!4.11e-51!102;UBERON:0002193!7.79e-46!112;UBERON:0002405!1.99e-44!115;UBERON:0002204!4.97e-28!167;UBERON:0003081!9.11e-20!216;UBERON:0002384!1.73e-12!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.12e-68,76;UBERON:0001474,4.32e-63,82;UBERON:0004765,4.24e-57,90;UBERON:0002405,4.09e-55,93;UBERON:0002390,4.50e-52,98;UBERON:0003061,4.50e-52,98;UBERON:0001434,6.10e-51,100;UBERON:0002193,7.93e-47,108;UBERON:0002204,1.48e-28,167;UBERON:0003081,1.39e-22,203;UBERON:0000926,1.16e-12,315;UBERON:0004120,1.16e-12,315;UBERON:0006603,1.16e-12,315;UBERON:0002384,6.54e-11,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,2.03557534291391,3.02300754951048,0.970336244751265,1.62700325833979,0.822335776043652,2.16794459626573,5.17846306179871,1.7931249457037,4.49316236788312,1.72372840368309,0,6.77132432971709,2.44715041405386,0.818718450173537,2.69668181334102,1.83650335422542,0.641858054152187,1.91801137739712,1.31940520074686,2.99195486432448,2.55734850319616,1.45104619314292,1.13477044938228,3.11411124497787,2.76373531782418,3.12889751052121,2.17188844705117,1.21079900526674,1.84138817993782,1.26584954976354,0,0.637812899895131,0.838634582033504,1.12328631146495,3.45406853535464,1.6072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,4.52031382288914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:76476813..76476816,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C583 | |||
|description=CAGE_peak_at_chr11:76476813..76476816,+ | |||
|id=chr11:76476813..76476816,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.71e-116!42;CL:0000860!8.81e-108!45;CL:0002194!1.99e-87!63;CL:0000576!1.99e-87!63;CL:0000040!1.99e-87!63;CL:0000559!1.99e-87!63;CL:0002009!1.60e-84!65;CL:0000766!2.07e-79!76;CL:0000839!5.63e-78!70;CL:0000557!8.94e-77!71;CL:0000763!2.43e-51!112;CL:0000049!2.43e-51!112;CL:0002087!2.74e-50!119;CL:0000738!1.14e-48!140;CL:0002031!6.33e-48!124;CL:0000037!5.47e-38!172;CL:0000566!5.47e-38!172;CL:0002032!6.39e-38!165;CL:0000837!6.39e-38!165;CL:0000988!2.05e-35!182;CL:0000134!1.60e-13!358;CL:0002320!4.38e-13!365;CL:0000219!1.53e-11!390;CL:0000048!1.07e-09!430;CL:0000723!1.95e-09!436;CL:0000034!4.26e-09!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.88e-129;33!CL:0002057;2.88e-129;33!CL:0000473;2.32e-105;39!CL:0000234;2.32e-105;39!CL:0000576;3.36e-58;48!CL:0000766;1.02e-36;69!CL:0000763;1.16e-20;100!CL:0002087;2.36e-15;104!CL:0000738;3.14e-11;136!CL:0000988;1.47e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.82e-113,48;CL:0000234,9.82e-113,48;CL:0000860,2.67e-112,42;CL:0002057,2.67e-112,42;CL:0002194,3.37e-89,59;CL:0000576,3.37e-89,59;CL:0000040,3.37e-89,59;CL:0000559,3.37e-89,59;CL:0002009,3.68e-86,61;CL:0000839,2.34e-79,66;CL:0000557,4.06e-78,67;CL:0000766,1.62e-77,72;CL:0000763,3.09e-50,108;CL:0000049,3.09e-50,108;CL:0002087,1.08e-43,115;CL:0002031,1.13e-41,120;CL:0000738,6.52e-39,136;CL:0002032,4.23e-32,161;CL:0000837,4.23e-32,161;CL:0000037,1.49e-30,168;CL:0000988,9.66e-29,177;CL:0000134,1.06e-11,354;CL:0002320,2.29e-11,361;CL:0000219,3.45e-10,386;CL:0000048,9.62e-09,427;CL:0000723,1.52e-08,433;CL:0000034,2.76e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.54e-82;42!CL:0000049;2.43e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.65e-67!80;UBERON:0001474!4.47e-62!86;UBERON:0004765!1.07e-51!101;UBERON:0001434!1.07e-51!101;UBERON:0002390!4.11e-51!102;UBERON:0003061!4.11e-51!102;UBERON:0002193!7.79e-46!112;UBERON:0002405!1.99e-44!115;UBERON:0002204!4.97e-28!167;UBERON:0003081!9.11e-20!216;UBERON:0002384!1.73e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.12e-68,76;UBERON:0001474,4.32e-63,82;UBERON:0004765,4.24e-57,90;UBERON:0002405,4.09e-55,93;UBERON:0002390,4.50e-52,98;UBERON:0003061,4.50e-52,98;UBERON:0001434,6.10e-51,100;UBERON:0002193,7.93e-47,108;UBERON:0002204,1.48e-28,167;UBERON:0003081,1.39e-22,203;UBERON:0000926,1.16e-12,315;UBERON:0004120,1.16e-12,315;UBERON:0006603,1.16e-12,315;UBERON:0002384,6.54e-11,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,2.03557534291391,3.02300754951048,0.970336244751265,1.62700325833979,0.822335776043652,2.16794459626573,5.17846306179871,1.7931249457037,4.49316236788312,1.72372840368309,0,6.77132432971709,2.44715041405386,0.818718450173537,2.69668181334102,1.83650335422542,0.641858054152187,1.91801137739712,1.31940520074686,2.99195486432448,2.55734850319616,1.45104619314292,1.13477044938228,3.11411124497787,2.76373531782418,3.12889751052121,2.17188844705117,1.21079900526674,1.84138817993782,1.26584954976354,0,0.637812899895131,0.838634582033504,1.12328631146495,3.45406853535464,1.6072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,4.52031382288914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:76476813..76476816,+ | |||
}} |
Revision as of 19:45, 10 September 2013
Short description: | p@chr11:76476813..76476816, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:76476813..76476816, + |
Coexpression cluster: | C583_CD14_Monocytederived_Basophils_CD14CD16_immature_Mast_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.82e-113 | 48 |
phagocyte | 9.82e-113 | 48 |
classical monocyte | 2.67e-112 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.67e-112 | 42 |
monopoietic cell | 3.37e-89 | 59 |
monocyte | 3.37e-89 | 59 |
monoblast | 3.37e-89 | 59 |
promonocyte | 3.37e-89 | 59 |
macrophage dendritic cell progenitor | 3.68e-86 | 61 |
myeloid lineage restricted progenitor cell | 2.34e-79 | 66 |
granulocyte monocyte progenitor cell | 4.06e-78 | 67 |
myeloid leukocyte | 1.62e-77 | 72 |
myeloid cell | 3.09e-50 | 108 |
common myeloid progenitor | 3.09e-50 | 108 |
nongranular leukocyte | 1.08e-43 | 115 |
hematopoietic lineage restricted progenitor cell | 1.13e-41 | 120 |
leukocyte | 6.52e-39 | 136 |
hematopoietic oligopotent progenitor cell | 4.23e-32 | 161 |
hematopoietic multipotent progenitor cell | 4.23e-32 | 161 |
hematopoietic stem cell | 1.49e-30 | 168 |
hematopoietic cell | 9.66e-29 | 177 |
mesenchymal cell | 1.06e-11 | 354 |
connective tissue cell | 2.29e-11 | 361 |
motile cell | 3.45e-10 | 386 |
multi fate stem cell | 9.62e-09 | 427 |
somatic stem cell | 1.52e-08 | 433 |
stem cell | 2.76e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.12e-68 | 76 |
bone element | 4.32e-63 | 82 |
skeletal element | 4.24e-57 | 90 |
immune system | 4.09e-55 | 93 |
hematopoietic system | 4.50e-52 | 98 |
blood island | 4.50e-52 | 98 |
skeletal system | 6.10e-51 | 100 |
hemolymphoid system | 7.93e-47 | 108 |
musculoskeletal system | 1.48e-28 | 167 |
lateral plate mesoderm | 1.39e-22 | 203 |
mesoderm | 1.16e-12 | 315 |
mesoderm-derived structure | 1.16e-12 | 315 |
presumptive mesoderm | 1.16e-12 | 315 |
connective tissue | 6.54e-11 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.