FFCP PHASE1:Hg19::chr11:72525014..72525019,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=89849|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25464|TSSclassifier=W|UniProt=Q8NAA4|association_with_transcript=-333bp_to_ENST00000321297_5end|coexpression_cluster_id=C0|description=CAGE_peak_6_at_ATG16L2_5end|id=chr11:72525014..72525019,+|ontology_enrichment_celltype=CL:0002057!3.03e-73!42;CL:0000860!2.15e-67!45;CL:0000738!1.39e-58!140;CL:0000766!1.22e-55!76;CL:0000037!3.36e-51!172;CL:0000566!3.36e-51!172;CL:0000557!6.01e-50!71;CL:0000988!1.36e-48!182;CL:0002009!2.19e-48!65;CL:0002031!2.52e-48!124;CL:0002087!2.75e-47!119;CL:0002032!4.22e-46!165;CL:0000837!4.22e-46!165;CL:0000839!4.27e-46!70;CL:0002194!2.18e-45!63;CL:0000576!2.18e-45!63;CL:0000040!2.18e-45!63;CL:0000559!2.18e-45!63;CL:0000763!3.58e-42!112;CL:0000049!3.58e-42!112;CL:0000134!1.10e-17!358;CL:0002393!4.13e-17!9;CL:0002397!4.13e-17!9;CL:0002320!6.57e-17!365;CL:0000219!4.32e-16!390;CL:0000034!3.01e-12!444;CL:0000048!1.67e-11!430;CL:0000723!4.81e-11!436;CL:0000094!9.63e-09!8;CL:0000081!6.10e-08!11;CL:0000875!6.37e-07!3;CL:0002396!6.37e-07!3|ontology_enrichment_celltype_v019=CL:0000860;3.48e-40;33!CL:0002057;3.48e-40;33!CL:0000576;9.85e-39;48!CL:0000766;5.92e-33;69!CL:0000473;1.49e-27;39!CL:0000234;1.49e-27;39!CL:0000094;6.77e-17;8!CL:0000875;1.55e-16;3!CL:0002396;1.55e-16;3!CL:0002393;5.20e-15;6!CL:0002397;5.20e-15;6!CL:0000763;1.82e-14;100!CL:0000081;3.12e-12;11!CL:0002087;2.51e-11;104!CL:0000738;2.41e-09;136!CL:0000767;2.84e-08;3!CL:0000775;2.84e-08;3|ontology_enrichment_celltype_v019_2=CL:0000860,4.90e-70,42;CL:0002057,4.90e-70,42;CL:0000766,1.91e-61,72;CL:0000473,1.22e-60,48;CL:0000234,1.22e-60,48;CL:0002009,6.67e-50,61;CL:0000557,8.08e-49,67;CL:0002194,1.74e-47,59;CL:0000576,1.74e-47,59;CL:0000040,1.74e-47,59;CL:0000559,1.74e-47,59;CL:0000839,1.15e-45,66;CL:0000763,4.04e-42,108;CL:0000049,4.04e-42,108;CL:0000738,3.57e-37,136;CL:0000037,5.47e-31,168;CL:0000988,4.24e-29,177;CL:0002393,8.51e-29,9;CL:0002397,8.51e-29,9;CL:0002032,2.04e-28,161;CL:0000837,2.04e-28,161;CL:0002031,2.57e-27,120;CL:0002087,2.07e-26,115;CL:0000094,5.29e-17,8;CL:0000875,9.84e-17,3;CL:0002396,9.84e-17,3;CL:0000081,2.61e-12,11;CL:0000134,2.44e-11,354;CL:0002320,5.45e-11,361;CL:0000219,9.17e-10,386;CL:0000034,1.87e-09,441;CL:0000767,2.04e-08,3;CL:0000775,2.55e-08,3;CL:0000048,2.92e-08,427;CL:0000723,4.70e-08,433|ontology_enrichment_development_v019=CL:0002057;2.79e-47;42!CL:0000049;1.29e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.75e-50!102;UBERON:0003061!4.75e-50!102;UBERON:0002371!7.83e-45!80;UBERON:0002193!5.68e-44!112;UBERON:0001474!1.22e-40!86;UBERON:0004765!2.36e-32!101;UBERON:0001434!2.36e-32!101;UBERON:0002405!2.92e-29!115;UBERON:0003081!2.29e-18!216;UBERON:0002384!7.47e-16!375;UBERON:0002204!6.79e-14!167;UBERON:0000178!2.03e-08!15;UBERON:0000179!2.03e-08!15;UBERON:0000463!2.03e-08!15|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.71e-46,76;UBERON:0001474,3.06e-42,82;UBERON:0002390,1.98e-40,98;UBERON:0003061,1.98e-40,98;UBERON:0004765,4.94e-38,90;UBERON:0002405,1.22e-36,93;UBERON:0002193,3.52e-36,108;UBERON:0001434,1.04e-33,100;UBERON:0002204,5.27e-18,167;UBERON:0003081,1.47e-16,203;UBERON:0002384,1.62e-10,371;UBERON:0000926,1.44e-08,315;UBERON:0004120,1.44e-08,315;UBERON:0006603,1.44e-08,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,0.383829398097213,1.85779347979291,0,0,0,0.309868802321207,0,1.17440175733939,1.66198622559563,2.00544447470142,4.34021741431704,0,0,0,1.59938062657521,1.51150377475524,1.69808842831471,0.929716147622738,0.822335776043652,4.02618282163635,0.28769239232215,0.512321413058201,0.709446689665756,0.689491361473237,0.645484683583826,1.35426486594342,0.941211697713023,1.91034305040492,1.79778787556068,2.14258724659632,0.962787081228281,0.639337125799041,1.31940520074686,0.797854630486527,2.13112375266347,1.16083695451434,2.8369261234557,3.11411124497787,0.251248665256743,0.521482918420201,1.52032191293582,3.02699751316684,2.94622108790052,2.84816148696796,0.422510572623884,0.850417199860174,1.25795187305026,0.561643155732475,0.750884464207532,0.32145117339416,1.71007646244749,1.19350006319454,1.82664153764634,0,0,0,0.853460445133014,0,0,0,0,0.569212969109448,0.587237189370939,2.29363936875137,1.32171328579026,2.80254281490768,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6219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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=89849 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25464 | |||
|TSSclassifier=W | |||
|UniProt=Q8NAA4 | |||
|association_with_transcript=-333bp_to_ENST00000321297_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_ATG16L2_5end | |||
|id=chr11:72525014..72525019,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.03e-73!42;CL:0000860!2.15e-67!45;CL:0000738!1.39e-58!140;CL:0000766!1.22e-55!76;CL:0000037!3.36e-51!172;CL:0000566!3.36e-51!172;CL:0000557!6.01e-50!71;CL:0000988!1.36e-48!182;CL:0002009!2.19e-48!65;CL:0002031!2.52e-48!124;CL:0002087!2.75e-47!119;CL:0002032!4.22e-46!165;CL:0000837!4.22e-46!165;CL:0000839!4.27e-46!70;CL:0002194!2.18e-45!63;CL:0000576!2.18e-45!63;CL:0000040!2.18e-45!63;CL:0000559!2.18e-45!63;CL:0000763!3.58e-42!112;CL:0000049!3.58e-42!112;CL:0000134!1.10e-17!358;CL:0002393!4.13e-17!9;CL:0002397!4.13e-17!9;CL:0002320!6.57e-17!365;CL:0000219!4.32e-16!390;CL:0000034!3.01e-12!444;CL:0000048!1.67e-11!430;CL:0000723!4.81e-11!436;CL:0000094!9.63e-09!8;CL:0000081!6.10e-08!11;CL:0000875!6.37e-07!3;CL:0002396!6.37e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.48e-40;33!CL:0002057;3.48e-40;33!CL:0000576;9.85e-39;48!CL:0000766;5.92e-33;69!CL:0000473;1.49e-27;39!CL:0000234;1.49e-27;39!CL:0000094;6.77e-17;8!CL:0000875;1.55e-16;3!CL:0002396;1.55e-16;3!CL:0002393;5.20e-15;6!CL:0002397;5.20e-15;6!CL:0000763;1.82e-14;100!CL:0000081;3.12e-12;11!CL:0002087;2.51e-11;104!CL:0000738;2.41e-09;136!CL:0000767;2.84e-08;3!CL:0000775;2.84e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.90e-70,42;CL:0002057,4.90e-70,42;CL:0000766,1.91e-61,72;CL:0000473,1.22e-60,48;CL:0000234,1.22e-60,48;CL:0002009,6.67e-50,61;CL:0000557,8.08e-49,67;CL:0002194,1.74e-47,59;CL:0000576,1.74e-47,59;CL:0000040,1.74e-47,59;CL:0000559,1.74e-47,59;CL:0000839,1.15e-45,66;CL:0000763,4.04e-42,108;CL:0000049,4.04e-42,108;CL:0000738,3.57e-37,136;CL:0000037,5.47e-31,168;CL:0000988,4.24e-29,177;CL:0002393,8.51e-29,9;CL:0002397,8.51e-29,9;CL:0002032,2.04e-28,161;CL:0000837,2.04e-28,161;CL:0002031,2.57e-27,120;CL:0002087,2.07e-26,115;CL:0000094,5.29e-17,8;CL:0000875,9.84e-17,3;CL:0002396,9.84e-17,3;CL:0000081,2.61e-12,11;CL:0000134,2.44e-11,354;CL:0002320,5.45e-11,361;CL:0000219,9.17e-10,386;CL:0000034,1.87e-09,441;CL:0000767,2.04e-08,3;CL:0000775,2.55e-08,3;CL:0000048,2.92e-08,427;CL:0000723,4.70e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.79e-47;42!CL:0000049;1.29e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.75e-50!102;UBERON:0003061!4.75e-50!102;UBERON:0002371!7.83e-45!80;UBERON:0002193!5.68e-44!112;UBERON:0001474!1.22e-40!86;UBERON:0004765!2.36e-32!101;UBERON:0001434!2.36e-32!101;UBERON:0002405!2.92e-29!115;UBERON:0003081!2.29e-18!216;UBERON:0002384!7.47e-16!375;UBERON:0002204!6.79e-14!167;UBERON:0000178!2.03e-08!15;UBERON:0000179!2.03e-08!15;UBERON:0000463!2.03e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.71e-46,76;UBERON:0001474,3.06e-42,82;UBERON:0002390,1.98e-40,98;UBERON:0003061,1.98e-40,98;UBERON:0004765,4.94e-38,90;UBERON:0002405,1.22e-36,93;UBERON:0002193,3.52e-36,108;UBERON:0001434,1.04e-33,100;UBERON:0002204,5.27e-18,167;UBERON:0003081,1.47e-16,203;UBERON:0002384,1.62e-10,371;UBERON:0000926,1.44e-08,315;UBERON:0004120,1.44e-08,315;UBERON:0006603,1.44e-08,315 | |||
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|short_description=p6@ATG16L2 | |||
}} |
Revision as of 19:33, 10 September 2013
Short description: | p6@ATG16L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ATG16L2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -333bp_to_ENST00000321297_5end |
EntrezGene: | ATG16L2 |
HGNC: | 25464 |
UniProt: | Q8NAA4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.71e-46 | 76 |
bone element | 3.06e-42 | 82 |
hematopoietic system | 1.98e-40 | 98 |
blood island | 1.98e-40 | 98 |
skeletal element | 4.94e-38 | 90 |
immune system | 1.22e-36 | 93 |
hemolymphoid system | 3.52e-36 | 108 |
skeletal system | 1.04e-33 | 100 |
musculoskeletal system | 5.27e-18 | 167 |
lateral plate mesoderm | 1.47e-16 | 203 |
connective tissue | 1.62e-10 | 371 |
mesoderm | 1.44e-08 | 315 |
mesoderm-derived structure | 1.44e-08 | 315 |
presumptive mesoderm | 1.44e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.