FFCP PHASE1:Hg19::chr11:62623621..62623640,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6520|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11026|TSSclassifier=S|UniProt=F5GZS6|association_with_transcript=0bp_to_ENST00000535296_5end|coexpression_cluster_id=C3176|description=CAGE_peak_5_at_SLC3A2_5end|id=chr11:62623621..62623640,+|ontology_enrichment_celltype=CL:0000066!2.60e-36!254;CL:0000548!1.11e-13!679;CL:0000004!1.11e-13!679;CL:0000255!1.11e-13!679;CL:0000012!1.48e-13!682;CL:0002321!4.28e-11!248;CL:0000220!1.61e-10!246;CL:0000223!9.64e-10!59;CL:0002076!1.53e-09!43;CL:0000003!4.19e-09!722;CL:0000063!2.46e-08!578;CL:0002368!5.27e-08!13;CL:0000076!6.13e-08!62|ontology_enrichment_celltype_v019=CL:0002368;2.04e-08;13!CL:0002076;2.36e-08;42!CL:0002202;8.09e-07;9!CL:0002632;8.09e-07;9|ontology_enrichment_celltype_v019_2=CL:0000066,3.41e-37,253;CL:0002321,7.69e-11,250;CL:0000223,2.81e-10,58;CL:0002076,2.90e-10,42;CL:0002368,2.59e-08,13;CL:0000076,6.94e-08,63;CL:0002202,9.19e-07,9;CL:0002632,9.19e-07,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!7.58e-31!235;DOID:14566!5.23e-30!239;DOID:305!2.45e-21!106;DOID:0050687!1.15e-20!143;DOID:0050686!9.67e-12!137;DOID:2531!9.63e-08!51;DOID:0060083!9.63e-08!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:162,1.18e-29,235;DOID:14566,1.64e-28,239;DOID:305,3.66e-21,106;DOID:0050687,3.84e-20,143;DOID:0050686,9.83e-11,137;DOID:2531,8.41e-08,51;DOID:0060083,8.41e-08,51|ontology_enrichment_uberon=UBERON:0008947!7.20e-08!38;UBERON:0003258!7.20e-08!38;UBERON:0001737!1.95e-07!9;UBERON:0000072!4.43e-07!46;UBERON:0000065!9.12e-07!53|ontology_enrichment_uberon_v019=UBERON:0000072;3.49e-09;37!UBERON:0000065;5.48e-08;44!UBERON:0001737;9.49e-08;9!UBERON:0001557;9.49e-08;9!UBERON:0004807;1.19e-07;22!UBERON:0005911;9.93e-07;36|ontology_enrichment_uberon_v019_2=UBERON:0008947,1.17e-08,38;UBERON:0003258,1.17e-08,38;UBERON:0001737,1.02e-07,9;UBERON:0000072,2.96e-07,47;UBERON:0000065,3.80e-07,54|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0.446961094427288,0.872338524100369,0,1.26343974685366,0.261185628199839,11.0580271425679,38.3790642384835,7.64544802455603,4.22027165165526,1.11389717664042,0.994192127183747,2.01697543935533,1.20538905604795,0,0.487932798790507,4.43235809076436,3.4680117511523,5.64218498660558,0.85870796139317,3.14811177667634,1.63205431473244,6.03665905408815,8.45636071334441,6.13944094246698,0,1.53531759238885,0.309632246632152,41.3739551015517,28.915768202712,18.4877005083394,2.47895041856965,5.54460006700944,2.05520307534393,0,0.601633342410425,0.434021741431704,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0.422510572623884,0,0,0.22465726229299,0,0.16072558669708,0,0,0,0,1.09227722252426,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,1.70763890732835,0.587237189370939,0.764546456250458,1.32171328579026,0.560508562981536,2.10707267820062,1.37696839079683,1.57204305099666,2.87842098599313,2.34061093546949,0.651844533267181,0.473447805734733,0,3.56513462032555,2.3568472597987,1.99380505125259,2.16643091012012,3.20228299314188,4.81219585971549,0.657751618414705,1.93445012450094,2.89803085735052,0.296573126324121,0,0,3.62589896632212,0.766440987203842,1.71813722741315,1.51811815211702,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,0.80642697289893,1.60464117470104,0.724122019413995,0,0.670700859703636,1.66221330396589,2.89151321907653,1.00267582127178,0.869079113764942,0,0.973269740605272,1.51255707462509,3.32594096193846,2.89854792787316,0.392937226493138,9.4716774956061,15.9437310397305,0.649094787309367,1.91542711029194,3.45690697349049,0.715471872916026,0,0.371457501329565,4.96906018416763,2.58070378531837,4.16568601929113,2.82653970962005,2.93649605346934,4.95212475492121,5.01587919688345,0,0.35576626268671,0.66944122552934,2.01414658554573,3.80136052859256,1.46437234528902,4.04429388380456,8.1014194788176,1.51809538082936,0.22452937262617,1.91439516821648,6.13266549863533,8.54339093611316,4.39684185432977,0,0,41.4289349535408,0.496971951695318,2.5326102332916,2.1185468930115,5.73673241497627,2.12801029319014,3.92474320099615,14.9448594021587,2.96001058100592,0.622422070799533,1.34710672069688,0.980771418680752,0.151357427644931,0,3.28050004567315,2.18512053781224,3.4228309292667,0.747243402759005,4.69737994575059,2.75184005425824,5.05622904128095,0.408308342509787,0.368502951935304,0.516628905878827,0,0.247266929278557,1.82032272387605,6.46756327634615,1.17835279767846,1.87677779807946,0.554128230968366,0,0.919463387397059,0,3.51639767796065,5.202299434977,1.06778694409284,0.847727604638247,10.8032794590385,1.23663035086127,1.54584324027377,1.30281799432113,5.56961896396179,0.876933046450788,5.3011092591264,1.10459878370759,0.323292113637624,2.4850671476163,1.41052937518696,1.01736355386293,7.92369497969517,12.5463215471784,8.03052867089211,9.75789649036763,13.915625673756,10.8060366868652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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6520 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11026 | |||
|TSSclassifier=S | |||
|UniProt=F5GZS6 | |||
|association_with_transcript=0bp_to_ENST00000535296_5end | |||
|coexpression_cluster_id=C3176 | |||
|description=CAGE_peak_5_at_SLC3A2_5end | |||
|id=chr11:62623621..62623640,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.60e-36!254;CL:0000548!1.11e-13!679;CL:0000004!1.11e-13!679;CL:0000255!1.11e-13!679;CL:0000012!1.48e-13!682;CL:0002321!4.28e-11!248;CL:0000220!1.61e-10!246;CL:0000223!9.64e-10!59;CL:0002076!1.53e-09!43;CL:0000003!4.19e-09!722;CL:0000063!2.46e-08!578;CL:0002368!5.27e-08!13;CL:0000076!6.13e-08!62 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.04e-08;13!CL:0002076;2.36e-08;42!CL:0002202;8.09e-07;9!CL:0002632;8.09e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.41e-37,253;CL:0002321,7.69e-11,250;CL:0000223,2.81e-10,58;CL:0002076,2.90e-10,42;CL:0002368,2.59e-08,13;CL:0000076,6.94e-08,63;CL:0002202,9.19e-07,9;CL:0002632,9.19e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.58e-31!235;DOID:14566!5.23e-30!239;DOID:305!2.45e-21!106;DOID:0050687!1.15e-20!143;DOID:0050686!9.67e-12!137;DOID:2531!9.63e-08!51;DOID:0060083!9.63e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.18e-29,235;DOID:14566,1.64e-28,239;DOID:305,3.66e-21,106;DOID:0050687,3.84e-20,143;DOID:0050686,9.83e-11,137;DOID:2531,8.41e-08,51;DOID:0060083,8.41e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0008947!7.20e-08!38;UBERON:0003258!7.20e-08!38;UBERON:0001737!1.95e-07!9;UBERON:0000072!4.43e-07!46;UBERON:0000065!9.12e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;3.49e-09;37!UBERON:0000065;5.48e-08;44!UBERON:0001737;9.49e-08;9!UBERON:0001557;9.49e-08;9!UBERON:0004807;1.19e-07;22!UBERON:0005911;9.93e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,1.17e-08,38;UBERON:0003258,1.17e-08,38;UBERON:0001737,1.02e-07,9;UBERON:0000072,2.96e-07,47;UBERON:0000065,3.80e-07,54 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0.446961094427288,0.872338524100369,0,1.26343974685366,0.261185628199839,11.0580271425679,38.3790642384835,7.64544802455603,4.22027165165526,1.11389717664042,0.994192127183747,2.01697543935533,1.20538905604795,0,0.487932798790507,4.43235809076436,3.4680117511523,5.64218498660558,0.85870796139317,3.14811177667634,1.63205431473244,6.03665905408815,8.45636071334441,6.13944094246698,0,1.53531759238885,0.309632246632152,41.3739551015517,28.915768202712,18.4877005083394,2.47895041856965,5.54460006700944,2.05520307534393,0,0.601633342410425,0.434021741431704,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0.422510572623884,0,0,0.22465726229299,0,0.16072558669708,0,0,0,0,1.09227722252426,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,1.70763890732835,0.587237189370939,0.764546456250458,1.32171328579026,0.560508562981536,2.10707267820062,1.37696839079683,1.57204305099666,2.87842098599313,2.34061093546949,0.651844533267181,0.473447805734733,0,3.56513462032555,2.3568472597987,1.99380505125259,2.16643091012012,3.20228299314188,4.81219585971549,0.657751618414705,1.93445012450094,2.89803085735052,0.296573126324121,0,0,3.62589896632212,0.766440987203842,1.71813722741315,1.51811815211702,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,0.80642697289893,1.60464117470104,0.724122019413995,0,0.670700859703636,1.66221330396589,2.89151321907653,1.00267582127178,0.869079113764942,0,0.973269740605272,1.51255707462509,3.32594096193846,2.89854792787316,0.392937226493138,9.4716774956061,15.9437310397305,0.649094787309367,1.91542711029194,3.45690697349049,0.715471872916026,0,0.371457501329565,4.96906018416763,2.58070378531837,4.16568601929113,2.82653970962005,2.93649605346934,4.95212475492121,5.01587919688345,0,0.35576626268671,0.66944122552934,2.01414658554573,3.80136052859256,1.46437234528902,4.04429388380456,8.1014194788176,1.51809538082936,0.22452937262617,1.91439516821648,6.13266549863533,8.54339093611316,4.39684185432977,0,0,41.4289349535408,0.496971951695318,2.5326102332916,2.1185468930115,5.73673241497627,2.12801029319014,3.92474320099615,14.9448594021587,2.96001058100592,0.622422070799533,1.34710672069688,0.980771418680752,0.151357427644931,0,3.28050004567315,2.18512053781224,3.4228309292667,0.747243402759005,4.69737994575059,2.75184005425824,5.05622904128095,0.408308342509787,0.368502951935304,0.516628905878827,0,0.247266929278557,1.82032272387605,6.46756327634615,1.17835279767846,1.87677779807946,0.554128230968366,0,0.919463387397059,0,3.51639767796065,5.202299434977,1.06778694409284,0.847727604638247,10.8032794590385,1.23663035086127,1.54584324027377,1.30281799432113,5.56961896396179,0.876933046450788,5.3011092591264,1.10459878370759,0.323292113637624,2.4850671476163,1.41052937518696,1.01736355386293,7.92369497969517,12.5463215471784,8.03052867089211,9.75789649036763,13.915625673756,10.8060366868652,6.53064646596834,14.1299676490352,16.7889585174882,0,1.92972281457866,0,0,0.721879481669586,28.5119388096024,29.3337360735897,24.8241360779986,26.3602594830422,31.3746399493065,31.7942629608869,25.3482859341109,30.2181056293033,33.0882554973896,0.738155454624648,5.60967095213783,2.8810180793198,2.94017422771084,1.26755034821831,0,0,8.38779888887836,5.90344505006945,2.40194934417936,5.26801369961403,16.8602629886429,7.03702806881416,6.85154494173119,4.23550796903422,6.23960871167747,21.649701303791,0.34779121492523,2.34817388471643,2.02113026865503,4.62985512576611,1.52203321787679,0.790204397959275,4.29243081047436,0,2.57404691653161,1.63494278517601,14.0600750980165,2.51973192298289,7.93940544557364,6.00042102109084,15.112964802726,19.1691339582606,0,0.088048434013226,0.207328115540772,0.144119953416961,0,4.57184838903617,7.63976851116555,7.03304683260282,6.84289784090821,5.55268460597947,7.20823338825402,2.5724378936752,1.79409734952577,2.61576041299968,2.4935017179123,1.29271715757778,0,4.22651376278,0,0,1.54324424557285,1.41849132023278,3.72991050622539,2.14466990487221,3.25572963234866,6.58592269424615,1.62868092146868,0.710783897485092,3.95975936466715,0,0,0.299918973546171,2.43247561282381,0,0,2.39624855491583,0,1.42636905040718,1.73737568001095,0.821905290201534,0.716243852959582,1.00876629594175,0.591092280605782,2.15627574859517,1.15508732651774,0.508189248444927,0,0,1.00509759200609,1.91381625495949,0,0,0,0.736148950314839,0,1.35632511849868,0,0.535286966391485,0.473107245101804,0.468565659970853,0.601892199455438,2.27407504055985,1.03473071292505,5.31380478828349,3.13427586520895,0.347534457872331,1.17480694477644,0.343143423810856,0.413536052245775,0.862856803274467,0.106727557803444,10.9125925720653,13.3148351608398,9.67648938654977,0.248107807818777,0.306923946576125,0.561320188866147,0.384417447767103,0,0.321707842287215,0,2.46735510084249,1.77561725313127,1.47828880824856,1.55776328755086,1.51073491997947,14.7448528501779,2.205571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| |||
|short_description=p5@SLC3A2 | |||
}} |
Revision as of 18:36, 10 September 2013
Short description: | p5@SLC3A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SLC3A2_5end |
Coexpression cluster: | C3176_oral_cervical_Esophageal_Hep2_iPS_giant_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000535296_5end |
EntrezGene: | SLC3A2 |
HGNC: | 11026 |
UniProt: | F5GZS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.41e-37 | 253 |
embryonic cell | 7.69e-11 | 250 |
endodermal cell | 2.81e-10 | 58 |
endo-epithelial cell | 2.90e-10 | 42 |
respiratory epithelial cell | 2.59e-08 | 13 |
squamous epithelial cell | 6.94e-08 | 63 |
epithelial cell of tracheobronchial tree | 9.19e-07 | 9 |
epithelial cell of lower respiratory tract | 9.19e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
respiratory primordium | 1.17e-08 | 38 |
endoderm of foregut | 1.17e-08 | 38 |
larynx | 1.02e-07 | 9 |
segment of respiratory tract | 2.96e-07 | 47 |
respiratory tract | 3.80e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.18e-29 | 235 |
disease of cellular proliferation | 1.64e-28 | 239 |
carcinoma | 3.66e-21 | 106 |
cell type cancer | 3.84e-20 | 143 |
organ system cancer | 9.83e-11 | 137 |
hematologic cancer | 8.41e-08 | 51 |
immune system cancer | 8.41e-08 | 51 |
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