FFCP PHASE1:Hg19::chr11:4142834..4142878,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6240|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10451|TSSclassifier=S|UniProt=|association_with_transcript=-26bp_to_ENST00000531591_5end|coexpression_cluster_id=C106|description=CAGE_peak_5_at_RRM1_5end|id=chr11:4142834..4142878,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!8.28e-14!239;DOID:162!2.46e-13!235;DOID:2531!8.90e-08!51;DOID:0060083!8.90e-08!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:162,1.20e-08,235;DOID:14566,3.03e-08,239|ontology_enrichment_uberon=UBERON:0001737!3.79e-08!9;UBERON:0001557!7.78e-07!19|ontology_enrichment_uberon_v019=UBERON:0001737;1.64e-23;9!UBERON:0001557;1.64e-23;9|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.72e-23,9;UBERON:0001557,2.71e-14,19|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,2.00146596706261,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0.662794751455832,0,0.602694528023977,0,0,0.123121058076788,0,0,1.14494394852423,1.09499540058307,0.753255837568817,0.840547463227464,0.492603536699674,0.550975469195755,0,0.383829398097213,0.154816123316076,0,0,0.739508020333575,0.46480320348181,0.710846162437108,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.526768169550154,0.196709770113833,0.393010762749165,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0.384273959177026,1.1705341280389,0.657751618414705,0,0.289803085735052,0,0,0,0.226618685395132,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0.821127996921047,0,0.267440195783507,0,0,0.670700859703636,0,0,0,0.144846518960824,0.795285947051099,0.486634870302636,0.756278537312543,0.221729397462564,0.351339142772504,0.196468613246569,0,0.741568885568859,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0.258416759169329,0,0,0.402829317109147,0,0.488124115096339,0,0,0.625098097988558,0,0.112611480483322,1.53316637465883,0,0.183201743930407,0,0,0.436094052142534,0,0.886413581652058,0.397227542439656,0.860509862246441,0.709336764396714,0.560677600142307,0,0,0,0.134710672069688,0.653847612453835,0,0,0,0.624320153660641,0,0.298897361103602,0.469737994575059,1.13311061057692,1.40450806702248,0.204154171254893,1.35117749042945,0.103325781175765,0,0.494533858557114,0,0,1.0100166837244,1.50142223846357,0,0,0.612975591598039,0.150238058906597,0.794025282120147,1.25572744982203,0.213557388818567,0.635795703478686,1.80054657650641,0.206105058476878,0.772921620136887,0.18611685633159,0.506328996723799,0.389748020644795,1.26216887122057,0.276149695926898,0.323292113637624,0.710019185033229,0.604512589365842,0.339121184620975,0,0.272746120590835,0,0.609868530647977,0.132529768321485,0.580969714347592,0.518305275076852,0,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0,10.1743848034266,11.2951742352328,7.23033089650446,10.1470454913802,6.972142210957,7.35538919244399,8.22470979777003,8.43752300038988,11.1576675514453,0,0,0.4115740113314,0,0,0.982827216677626,0,3.09024169590255,0.491953754172454,0.343135620597051,0,0,1.10581869652794,0.370353780634118,0,0,0,0.231860809950154,0,0.144366447761074,0.925971025153221,0.380508304469197,1.58040879591855,0,0.492434012174795,0,0.445893486866185,0,0.335964256397719,0,1.07470227243418,1.45316969256981,1.15014803749563,0,0,0,0.144119953416961,0.12624243342638,0.380987365753014,0,1.17217447210047,0,0.719792448923265,0.300343057843917,0.285826432630578,0,0.43596006883328,0.5867062865676,0.129271715757778,0,2.535908257668,0,0,0,0,0,0.142977993658148,0,0,0,0,1.58390374586686,0,0,0.499864955910285,0,1.00451418286425,2.10833939483032,0.239624855491583,0,0,1.01346914667305,0,0.358121926479791,0.112085143993527,0.197030760201927,0.215627574859517,0,0,0,0,0.335032530668698,3.18969375826582,0,0,0,0,0,0,0.415941723061614,0.892144943985809,0.788512075169673,0.585707074963566,0.300946099727719,0,0,0,0.184369168541703,0.60818530127658,0,0,0,0,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0.321707842287215,0,1.23367755042124,0.532685175939381,0.328508624055237,3.11552657510173,0.929683027679674,0.604297247958111,0.40101294060657,0.184161977871793,0.803701137152247,1.63882051206045,0.262248829918848,0.902399225814824,0.308061348417659,0,0,0.527758144464379,0,0,1.29549549661284,0,0,0,0,0,0,0.877039506583738,0.261435451024901,0.769350375349168,0.328014645699706,0.325378394664303,0.103041011647722,0.824125183365091,0.495056999523528,0,0,1.6068392984416,0,0.462145851343933,0.460511024178389,0.964856007391714,0.322260734604821,0.290033387828457,0.767039646744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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6240 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10451 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-26bp_to_ENST00000531591_5end | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_5_at_RRM1_5end | |||
|id=chr11:4142834..4142878,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!8.28e-14!239;DOID:162!2.46e-13!235;DOID:2531!8.90e-08!51;DOID:0060083!8.90e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.20e-08,235;DOID:14566,3.03e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.79e-08!9;UBERON:0001557!7.78e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.64e-23;9!UBERON:0001557;1.64e-23;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.72e-23,9;UBERON:0001557,2.71e-14,19 | |||
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| |||
|short_description=p5@RRM1 | |||
}} |
Revision as of 17:47, 10 September 2013
Short description: | p5@RRM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_RRM1_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | -26bp_to_ENST00000531591_5end |
EntrezGene: | RRM1 |
HGNC: | 10451 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.72e-23 | 9 |
upper respiratory tract | 2.71e-14 | 19 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.20e-08 | 235 |
disease of cellular proliferation | 3.03e-08 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.