FFCP PHASE1:Hg19::chr11:134282128..134282144,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27087|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=921|TSSclassifier=W|UniProt=Q9P2W7|association_with_transcript=-316bp_to_ENST00000312527,ENST00000392580,NM_018644,NM_054025,uc001qhq.2,uc001qhr.2_5end|coexpression_cluster_id=C4|description=CAGE_peak_1_at_B3GAT1_5end|id=chr11:134282128..134282144,-|ontology_enrichment_celltype=CL:0000047!1.95e-07!8;CL:0000147!5.99e-07!14;CL:0000625!8.06e-07!11|ontology_enrichment_celltype_v019=CL:0000540;6.54e-08;6!CL:0000404;6.54e-08;6!CL:0002319;6.90e-08;25|ontology_enrichment_celltype_v019_2=CL:0000047,4.19e-10,8;CL:0000540,6.44e-08,6;CL:0000031,6.44e-08,6;CL:0000404,6.44e-08,6;CL:0002319,7.28e-08,25|ontology_enrichment_development_v019=UBERON:0006601;4.18e-14;82!CL:0000031;6.54e-08;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!1.78e-49!86;UBERON:0000073!4.98e-48!94;UBERON:0001016!4.98e-48!94;UBERON:0001017!7.45e-47!82;UBERON:0001049!1.55e-44!57;UBERON:0005068!1.55e-44!57;UBERON:0006241!1.55e-44!57;UBERON:0007135!1.55e-44!57;UBERON:0002346!2.60e-39!90;UBERON:0003075!1.60e-38!86;UBERON:0007284!1.60e-38!86;UBERON:0002616!2.01e-37!59;UBERON:0007023!4.39e-37!115;UBERON:0000955!1.38e-36!69;UBERON:0006238!1.38e-36!69;UBERON:0002780!1.04e-35!41;UBERON:0001890!1.04e-35!41;UBERON:0006240!1.04e-35!41;UBERON:0003080!2.15e-34!42;UBERON:0002020!6.51e-31!34;UBERON:0003528!6.51e-31!34;UBERON:0001893!6.63e-31!34;UBERON:0002791!5.03e-30!33;UBERON:0003056!4.75e-29!61;UBERON:0001869!5.61e-29!32;UBERON:0000924!3.99e-27!173;UBERON:0006601!3.99e-27!173;UBERON:0004121!3.75e-26!169;UBERON:0000956!8.56e-23!25;UBERON:0000203!8.56e-23!25;UBERON:0000033!2.62e-21!123;UBERON:0002619!3.15e-21!22;UBERON:0000153!2.03e-20!129;UBERON:0007811!2.03e-20!129;UBERON:0001950!2.39e-19!20;UBERON:0003076!4.89e-11!15;UBERON:0003057!4.89e-11!15;UBERON:0002420!1.24e-09!9;UBERON:0007245!1.24e-09!9;UBERON:0010009!1.24e-09!9;UBERON:0010011!1.24e-09!9;UBERON:0000454!1.24e-09!9;UBERON:0002308!1.63e-09!9;UBERON:0000125!1.63e-09!9;UBERON:0004732!2.03e-09!13;UBERON:0004733!1.73e-08!12;UBERON:0002028!1.73e-08!12;UBERON:0007277!1.73e-08!12;UBERON:0001871!3.45e-08!7;UBERON:0009663!9.84e-08!7;UBERON:0000200!8.20e-07!6|ontology_enrichment_uberon_v019=UBERON:0001893;5.17e-38;34!UBERON:0003528;5.84e-38;34!UBERON:0002020;5.84e-38;34!UBERON:0002791;8.04e-38;32!UBERON:0001869;1.15e-37;32!UBERON:0002780;9.84e-37;41!UBERON:0001890;9.84e-37;41!UBERON:0000073;2.20e-34;53!UBERON:0002616;2.20e-34;53!UBERON:0000956;1.27e-32;25!UBERON:0000203;1.27e-32;25!UBERON:0002619;3.03e-30;22!UBERON:0001950;1.66e-27;20!UBERON:0000955;2.50e-23;68!UBERON:0001017;1.41e-22;75!UBERON:0001016;3.11e-21;83!UBERON:0002420;2.66e-13;9!UBERON:0007245;2.66e-13;9!UBERON:0010009;2.66e-13;9!UBERON:0010011;2.66e-13;9!UBERON:0000454;2.66e-13;9!UBERON:0000125;3.92e-13;9!UBERON:0002308;3.92e-13;9!UBERON:0004732;1.07e-11;13!UBERON:0009663;1.51e-10;7!UBERON:0004733;2.21e-10;12!UBERON:0002028;2.21e-10;12!UBERON:0001871;6.50e-10;6!UBERON:0007023;9.65e-10;114!UBERON:0000200;3.49e-09;6!UBERON:0002298;5.01e-09;6!UBERON:0000349;2.58e-08;5!UBERON:0001894;3.25e-08;7!UBERON:0002021;5.20e-08;5!UBERON:0001872;8.26e-08;5!UBERON:0011216;5.31e-07;132!UBERON:0002680;5.72e-07;9!UBERON:0001895;5.72e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.79e-67,81;UBERON:0001016,1.59e-66,89;UBERON:0001049,1.55e-64,56;UBERON:0005068,1.55e-64,56;UBERON:0006241,1.55e-64,56;UBERON:0007135,1.55e-64,56;UBERON:0000073,1.90e-60,53;UBERON:0002616,1.90e-60,53;UBERON:0000955,2.74e-52,68;UBERON:0006238,2.74e-52,68;UBERON:0002780,2.70e-51,41;UBERON:0001890,2.70e-51,41;UBERON:0003080,2.70e-51,41;UBERON:0006240,2.70e-51,41;UBERON:0002346,8.55e-50,86;UBERON:0003075,1.38e-49,82;UBERON:0007284,1.38e-49,82;UBERON:0003528,2.71e-44,34;UBERON:0002020,2.71e-44,34;UBERON:0001893,2.78e-44,34;UBERON:0002791,1.33e-41,32;UBERON:0001869,1.81e-41,32;UBERON:0003056,4.31e-40,61;UBERON:0010371,9.43e-39,104;UBERON:0004121,8.39e-34,171;UBERON:0000924,8.39e-34,171;UBERON:0006601,8.39e-34,171;UBERON:0000956,1.90e-32,25;UBERON:0000203,1.90e-32,25;UBERON:0002619,3.64e-30,22;UBERON:0007023,3.11e-29,114;UBERON:0010314,1.63e-28,132;UBERON:0001950,2.01e-27,20;UBERON:0011216,7.81e-19,223;UBERON:0003076,5.00e-14,15;UBERON:0003057,5.00e-14,15;UBERON:0002420,2.77e-13,9;UBERON:0007245,2.77e-13,9;UBERON:0010009,2.77e-13,9;UBERON:0010011,2.77e-13,9;UBERON:0000454,2.77e-13,9;UBERON:0000125,4.08e-13,9;UBERON:0002308,4.08e-13,9;UBERON:0004732,1.04e-11,13;UBERON:0009663,1.56e-10,7;UBERON:0004733,2.15e-10,12;UBERON:0002028,2.15e-10,12;UBERON:0007277,2.15e-10,12;UBERON:0001871,7.81e-10,6;UBERON:0000025,3.00e-09,192;UBERON:0000200,3.36e-09,6;UBERON:0002298,5.00e-09,6;UBERON:0001894,2.52e-08,7;UBERON:0006222,2.52e-08,7;UBERON:0000349,2.59e-08,5;UBERON:0002021,5.29e-08,5;UBERON:0001872,8.12e-08,5;UBERON:0002680,5.63e-07,9;UBERON:0001895,5.63e-07,9;UBERON:0010092,5.63e-07,9|phase1_expre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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27087 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=921 | |||
|TSSclassifier=W | |||
|UniProt=Q9P2W7 | |||
|association_with_transcript=-316bp_to_ENST00000312527,ENST00000392580,NM_018644,NM_054025,uc001qhq.2,uc001qhr.2_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_B3GAT1_5end | |||
|id=chr11:134282128..134282144,- | |||
|ontology_enrichment_celltype=CL:0000047!1.95e-07!8;CL:0000147!5.99e-07!14;CL:0000625!8.06e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000540;6.54e-08;6!CL:0000404;6.54e-08;6!CL:0002319;6.90e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.19e-10,8;CL:0000540,6.44e-08,6;CL:0000031,6.44e-08,6;CL:0000404,6.44e-08,6;CL:0002319,7.28e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.18e-14;82!CL:0000031;6.54e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@B3GAT1 | |||
}} |
Revision as of 16:47, 10 September 2013
Short description: | p1@B3GAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_B3GAT1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -316bp_to_ENST00000312527, ENST00000392580, NM_018644, NM_054025, uc001qhq.2, uc001qhr.2_5end |
EntrezGene: | B3GAT1 |
HGNC: | 921 |
UniProt: | Q9P2W7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.19e-10 | 8 |
neuron | 6.44e-08 | 6 |
neuroblast | 6.44e-08 | 6 |
electrically signaling cell | 6.44e-08 | 6 |
neural cell | 7.28e-08 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.