FFCP PHASE1:Hg19::chr11:123229399..123229419,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C73|description=CAGE_peak_at_chr11:123229399..123229419,+|id=chr11:123229399..123229419,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;4.39e-24;3!UBERON:0003124;1.74e-09;1|ontology_enrichment_disease=DOID:1287!8.71e-07!4|ontology_enrichment_disease_v019=DOID:1287;4.04e-18;4!DOID:114;7.29e-17;2!DOID:0060060;3.87e-09;1!DOID:178;3.87e-09;1!DOID:326;3.87e-09;1!DOID:3978;3.87e-09;1!DOID:3394;3.87e-09;1!DOID:0060061;3.87e-09;1!DOID:5844;3.87e-09;1!DOID:8691;3.87e-09;1!DOID:1799;7.55e-09;1!DOID:10165;7.55e-09;1!DOID:1798;7.55e-09;1!DOID:2355;7.55e-09;1|ontology_enrichment_disease_v019_2=DOID:1287,3.92e-18,4;DOID:114,7.30e-17,2;DOID:0060060,3.58e-09,1;DOID:0060061,3.58e-09,1;DOID:8691,3.58e-09,1;DOID:178,3.88e-09,1;DOID:326,3.88e-09,1;DOID:3978,3.88e-09,1;DOID:3394,3.88e-09,1;DOID:5844,3.88e-09,1;DOID:2355,7.27e-09,1;DOID:1799,1.07e-08,1;DOID:10165,1.07e-08,1;DOID:1798,1.07e-08,1|ontology_enrichment_uberon=UBERON:0001049!2.91e-44!57;UBERON:0005068!2.91e-44!57;UBERON:0006241!2.91e-44!57;UBERON:0007135!2.91e-44!57;UBERON:0000073!4.83e-43!94;UBERON:0001016!4.83e-43!94;UBERON:0002616!1.96e-42!59;UBERON:0001017!6.96e-42!82;UBERON:0005743!1.22e-41!86;UBERON:0000955!2.21e-41!69;UBERON:0006238!2.21e-41!69;UBERON:0002346!1.55e-37!90;UBERON:0002780!5.34e-37!41;UBERON:0001890!5.34e-37!41;UBERON:0006240!5.34e-37!41;UBERON:0003080!6.01e-36!42;UBERON:0007023!1.09e-35!115;UBERON:0003075!2.09e-35!86;UBERON:0007284!2.09e-35!86;UBERON:0001893!1.45e-29!34;UBERON:0001869!5.45e-29!32;UBERON:0002791!1.11e-27!33;UBERON:0002020!5.72e-27!34;UBERON:0003528!5.72e-27!34;UBERON:0003056!2.89e-26!61;UBERON:0002619!8.34e-26!22;UBERON:0000033!2.22e-25!123;UBERON:0000924!5.51e-25!173;UBERON:0006601!5.51e-25!173;UBERON:0000153!6.04e-25!129;UBERON:0007811!6.04e-25!129;UBERON:0004121!3.07e-23!169;UBERON:0000956!2.73e-22!25;UBERON:0000203!2.73e-22!25;UBERON:0001950!9.94e-22!20;UBERON:0000349!1.45e-12!5;UBERON:0004733!3.13e-12!12;UBERON:0002028!3.13e-12!12;UBERON:0007277!3.13e-12!12;UBERON:0004732!3.60e-11!13;UBERON:0001871!3.00e-10!7;UBERON:0003076!1.78e-09!15;UBERON:0003057!1.78e-09!15;UBERON:0000025!3.49e-09!194;UBERON:0002420!6.09e-09!9;UBERON:0007245!6.09e-09!9;UBERON:0010009!6.09e-09!9;UBERON:0010011!6.09e-09!9;UBERON:0000454!6.09e-09!9;UBERON:0001894!7.42e-09!7;UBERON:0006222!7.42e-09!7;UBERON:0000064!3.56e-08!219;UBERON:0001872!6.83e-08!5;UBERON:0001896!7.08e-08!3;UBERON:0005290!7.08e-08!3;UBERON:0010096!7.08e-08!3;UBERON:0002298!3.01e-07!8;UBERON:0002680!5.49e-07!9;UBERON:0001895!5.49e-07!9;UBERON:0010092!5.49e-07!9;UBERON:0003296!8.23e-07!4;UBERON:0010133!8.23e-07!4|ontology_enrichment_uberon_v019=UBERON:0003296;2.93e-18;4!UBERON:0010133;2.93e-18;4!UBERON:0001905;4.71e-17;2!UBERON:0002757;4.71e-17;2!UBERON:0010134;4.71e-17;2!UBERON:0005408;4.71e-17;2!UBERON:0001899;4.71e-17;2!UBERON:0002037;2.45e-12;6!UBERON:0001894;1.14e-10;7!UBERON:0002146;3.87e-09;1!UBERON:0005623;3.87e-09;1!UBERON:0002784;5.65e-09;4!UBERON:0002680;2.18e-08;9!UBERON:0001895;2.18e-08;9!UBERON:0000073;2.45e-08;53!UBERON:0002616;2.45e-08;53!UBERON:0000955;4.16e-08;68!UBERON:0001016;3.98e-07;83!UBERON:0002780;6.68e-07;41!UBERON:0001890;6.68e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0003296,3.29e-18,4;UBERON:0010133,3.29e-18,4;UBERON:0001905,4.91e-17,2;UBERON:0002757,4.91e-17,2;UBERON:0010134,4.91e-17,2;UBERON:0005408,4.91e-17,2;UBERON:0001899,4.91e-17,2;UBERON:0001016,8.17e-14,89;UBERON:0001017,2.37e-13,81;UBERON:0000073,8.78e-13,53;UBERON:0002616,8.78e-13,53;UBERON:0002037,2.14e-12,6;UBERON:0006215,2.14e-12,6;UBERON:0001049,5.03e-12,56;UBERON:0005068,5.03e-12,56;UBERON:0006241,5.03e-12,56;UBERON:0007135,5.03e-12,56;UBERON:0000955,1.52e-11,68;UBERON:0006238,1.52e-11,68;UBERON:0002346,1.08e-10,86;UBERON:0001894,1.22e-10,7;UBERON:0006222,1.22e-10,7;UBERON:0003075,1.90e-09,82;UBERON:0007284,1.90e-09,82;UBERON:0002146,4.54e-09,1;UBERON:0005623,4.54e-09,1;UBERON:0002784,5.76e-09,4;UBERON:0002680,1.99e-08,9;UBERON:0001895,1.99e-08,9;UBERON:0010092,1.99e-08,9;UBERON:0004121,2.47e-08,171;UBERON:0000924,2.47e-08,171;UBERON:0006601,2.47e-08,171;UBERON:0002780,2.82e-08,41;UBERON:0001890,2.82e-08,41;UBERON:0003080,2.82e-08,41;UBERON:0006240,2.82e-08,41;UBERON:0007023,1.02e-07,114;UBERON:0010371,4.42e-07,104|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_at_chr11:123229399..123229419,+ | |||
|id=chr11:123229399..123229419,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.39e-24;3!UBERON:0003124;1.74e-09;1 | |||
|ontology_enrichment_disease=DOID:1287!8.71e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:1287;4.04e-18;4!DOID:114;7.29e-17;2!DOID:0060060;3.87e-09;1!DOID:178;3.87e-09;1!DOID:326;3.87e-09;1!DOID:3978;3.87e-09;1!DOID:3394;3.87e-09;1!DOID:0060061;3.87e-09;1!DOID:5844;3.87e-09;1!DOID:8691;3.87e-09;1!DOID:1799;7.55e-09;1!DOID:10165;7.55e-09;1!DOID:1798;7.55e-09;1!DOID:2355;7.55e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1287,3.92e-18,4;DOID:114,7.30e-17,2;DOID:0060060,3.58e-09,1;DOID:0060061,3.58e-09,1;DOID:8691,3.58e-09,1;DOID:178,3.88e-09,1;DOID:326,3.88e-09,1;DOID:3978,3.88e-09,1;DOID:3394,3.88e-09,1;DOID:5844,3.88e-09,1;DOID:2355,7.27e-09,1;DOID:1799,1.07e-08,1;DOID:10165,1.07e-08,1;DOID:1798,1.07e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.91e-44!57;UBERON:0005068!2.91e-44!57;UBERON:0006241!2.91e-44!57;UBERON:0007135!2.91e-44!57;UBERON:0000073!4.83e-43!94;UBERON:0001016!4.83e-43!94;UBERON:0002616!1.96e-42!59;UBERON:0001017!6.96e-42!82;UBERON:0005743!1.22e-41!86;UBERON:0000955!2.21e-41!69;UBERON:0006238!2.21e-41!69;UBERON:0002346!1.55e-37!90;UBERON:0002780!5.34e-37!41;UBERON:0001890!5.34e-37!41;UBERON:0006240!5.34e-37!41;UBERON:0003080!6.01e-36!42;UBERON:0007023!1.09e-35!115;UBERON:0003075!2.09e-35!86;UBERON:0007284!2.09e-35!86;UBERON:0001893!1.45e-29!34;UBERON:0001869!5.45e-29!32;UBERON:0002791!1.11e-27!33;UBERON:0002020!5.72e-27!34;UBERON:0003528!5.72e-27!34;UBERON:0003056!2.89e-26!61;UBERON:0002619!8.34e-26!22;UBERON:0000033!2.22e-25!123;UBERON:0000924!5.51e-25!173;UBERON:0006601!5.51e-25!173;UBERON:0000153!6.04e-25!129;UBERON:0007811!6.04e-25!129;UBERON:0004121!3.07e-23!169;UBERON:0000956!2.73e-22!25;UBERON:0000203!2.73e-22!25;UBERON:0001950!9.94e-22!20;UBERON:0000349!1.45e-12!5;UBERON:0004733!3.13e-12!12;UBERON:0002028!3.13e-12!12;UBERON:0007277!3.13e-12!12;UBERON:0004732!3.60e-11!13;UBERON:0001871!3.00e-10!7;UBERON:0003076!1.78e-09!15;UBERON:0003057!1.78e-09!15;UBERON:0000025!3.49e-09!194;UBERON:0002420!6.09e-09!9;UBERON:0007245!6.09e-09!9;UBERON:0010009!6.09e-09!9;UBERON:0010011!6.09e-09!9;UBERON:0000454!6.09e-09!9;UBERON:0001894!7.42e-09!7;UBERON:0006222!7.42e-09!7;UBERON:0000064!3.56e-08!219;UBERON:0001872!6.83e-08!5;UBERON:0001896!7.08e-08!3;UBERON:0005290!7.08e-08!3;UBERON:0010096!7.08e-08!3;UBERON:0002298!3.01e-07!8;UBERON:0002680!5.49e-07!9;UBERON:0001895!5.49e-07!9;UBERON:0010092!5.49e-07!9;UBERON:0003296!8.23e-07!4;UBERON:0010133!8.23e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.93e-18;4!UBERON:0010133;2.93e-18;4!UBERON:0001905;4.71e-17;2!UBERON:0002757;4.71e-17;2!UBERON:0010134;4.71e-17;2!UBERON:0005408;4.71e-17;2!UBERON:0001899;4.71e-17;2!UBERON:0002037;2.45e-12;6!UBERON:0001894;1.14e-10;7!UBERON:0002146;3.87e-09;1!UBERON:0005623;3.87e-09;1!UBERON:0002784;5.65e-09;4!UBERON:0002680;2.18e-08;9!UBERON:0001895;2.18e-08;9!UBERON:0000073;2.45e-08;53!UBERON:0002616;2.45e-08;53!UBERON:0000955;4.16e-08;68!UBERON:0001016;3.98e-07;83!UBERON:0002780;6.68e-07;41!UBERON:0001890;6.68e-07;41 | |||
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|short_description=p@chr11:123229399..123229419,+ | |||
}} |
Revision as of 16:21, 10 September 2013
Short description: | p@chr11:123229399..123229419, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:123229399..123229419, + |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system disease | 3.92e-18 | 4 |
heart disease | 7.30e-17 | 2 |
non-Hodgkin lymphoma | 3.58e-09 | 1 |
cutaneous T cell lymphoma | 3.58e-09 | 1 |
mycosis fungoides | 3.58e-09 | 1 |
vascular disease | 3.88e-09 | 1 |
ischemia | 3.88e-09 | 1 |
extrinsic cardiomyopathy | 3.88e-09 | 1 |
myocardial ischemia | 3.88e-09 | 1 |
myocardial infarction | 3.88e-09 | 1 |
anemia | 7.27e-09 | 1 |
islet cell tumor | 1.07e-08 | 1 |
endocrine pancreas cancer | 1.07e-08 | 1 |
pancreatic endocrine carcinoma | 1.07e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.