FFCP PHASE1:Hg19::chr11:122051212..122051237,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-104bp_to_ENST00000533109_5end|coexpression_cluster_id=C1617|description=CAGE_peak_4_at_ENST00000533109_5end|id=chr11:122051212..122051237,-|ontology_enrichment_celltype=CL:0000055!2.09e-40!180;CL:0000057!2.14e-23!75;CL:0000680!6.09e-17!57;CL:0000056!6.09e-17!57;CL:0000355!6.09e-17!57;CL:0000187!1.60e-15!54;CL:0000183!2.10e-15!59;CL:0000220!5.45e-15!246;CL:0000222!5.75e-15!119;CL:0002321!1.85e-14!248;CL:0000548!5.98e-13!679;CL:0000004!5.98e-13!679;CL:0000255!5.98e-13!679;CL:0000393!1.50e-12!60;CL:0000211!1.50e-12!60;CL:0000012!2.26e-12!682;CL:0002620!9.83e-12!23;CL:0000144!2.08e-11!625;CL:0000192!2.10e-11!42;CL:0000514!2.10e-11!42;CL:0002371!9.71e-11!591;CL:0000359!7.40e-09!32;CL:0000003!2.90e-08!722|ontology_enrichment_celltype_v019=CL:0002620;2.08e-13;23!CL:0000057;4.43e-11;73!CL:0000187;1.70e-08;55!CL:0000192;3.03e-07;43!CL:0000359;3.31e-07;32!CL:0002320;3.90e-07;188!CL:0000134;4.22e-07;55!CL:0000048;9.22e-07;58|ontology_enrichment_celltype_v019_2=CL:0000057,1.80e-25,76;CL:0000680,3.71e-15,58;CL:0000056,3.71e-15,58;CL:0000355,3.71e-15,58;CL:0000187,1.45e-13,55;CL:0002620,1.58e-13,23;CL:0000393,2.08e-11,61;CL:0000211,2.08e-11,61;CL:0000222,2.85e-11,121;CL:0000048,3.68e-10,427;CL:0000192,6.16e-10,43;CL:0000514,6.16e-10,43;CL:0000723,1.16e-09,433;CL:0002321,2.96e-09,250;CL:0000034,1.07e-08,441;CL:0000359,8.74e-08,32|ontology_enrichment_development_v019=CL:0000355;1.17e-08;58!CL:0000514;3.03e-07;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;5.32e-08;14|ontology_enrichment_disease_v019_2=DOID:2394,6.15e-08,14|ontology_enrichment_uberon=UBERON:0000914!3.82e-22!83;UBERON:0002329!3.82e-22!83;UBERON:0003077!3.82e-22!83;UBERON:0003059!3.82e-22!83;UBERON:0007282!3.82e-22!83;UBERON:0009618!3.82e-22!83;UBERON:0007285!3.82e-22!83;UBERON:0004290!1.18e-17!70;UBERON:0000486!2.49e-17!82;UBERON:0000475!9.21e-17!365;UBERON:0001134!2.50e-14!61;UBERON:0002036!2.50e-14!61;UBERON:0003082!2.50e-14!61;UBERON:0003102!3.24e-13!95;UBERON:0002385!3.53e-13!63;UBERON:0001015!3.53e-13!63;UBERON:0000383!3.53e-13!63;UBERON:0005256!6.52e-13!143;UBERON:0000490!1.90e-11!138;UBERON:0002100!3.23e-11!216;UBERON:0002049!4.11e-11!79;UBERON:0007798!4.11e-11!79;UBERON:0000119!9.82e-11!312;UBERON:0000483!4.25e-10!309;UBERON:0000481!1.67e-09!347;UBERON:0002097!2.04e-09!40;UBERON:0002199!2.91e-09!45;UBERON:0002416!2.91e-09!45;UBERON:0001637!3.71e-09!42;UBERON:0003509!3.71e-09!42;UBERON:0004572!3.71e-09!42;UBERON:0004535!7.59e-09!110;UBERON:0004872!1.08e-08!84;UBERON:0001981!3.21e-08!60;UBERON:0007500!3.21e-08!60;UBERON:0004537!3.21e-08!60;UBERON:0006965!3.21e-08!60;UBERON:0001009!5.35e-08!113;UBERON:0004573!8.30e-08!33;UBERON:0004571!8.30e-08!33;UBERON:0000055!1.10e-07!69|ontology_enrichment_uberon_v019=UBERON:0002097;1.02e-07;41!UBERON:0002384;5.35e-07;198|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.86e-16,71;UBERON:0003059,1.86e-16,71;UBERON:0007282,1.86e-16,71;UBERON:0004290,1.86e-16,71;UBERON:0009618,1.86e-16,71;UBERON:0007524,3.48e-16,73;UBERON:0003077,5.73e-16,72;UBERON:0007285,5.73e-16,72;UBERON:0000486,1.03e-14,83;UBERON:0007503,6.26e-14,78;UBERON:0001134,3.62e-13,62;UBERON:0002036,3.62e-13,62;UBERON:0003082,3.62e-13,62;UBERON:0002385,2.78e-12,64;UBERON:0001015,2.78e-12,64;UBERON:0000383,2.78e-12,64;UBERON:0003102,4.62e-11,99;UBERON:0000490,5.92e-11,148;UBERON:0005256,2.79e-10,122;UBERON:0002097,4.67e-10,41;UBERON:0002199,3.96e-09,46;UBERON:0002416,3.96e-09,46;UBERON:0003104,1.90e-08,160;UBERON:0009142,1.90e-08,160;UBERON:0002100,2.49e-07,199|phase1_expression=1.09007027562334,2.14100523890983,2.53717927372748,0,0.446961094427288,0,2.53299878168311,0.631719873426831,0,1.72013755551056,0,0,0,13.8618315315252,3.97676850873499,5.3786011716142,3.61616716814386,4.38186054232424,0.487932798790507,1.23121058076788,0.816002764977012,0.313454721478088,2.0036519099174,2.32686522623903,1.00434111675842,0,0,0,0,0,0,1.83884244895785,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,0.670700859703636,0.767175371061182,0.722878304769133,1.00267582127178,1.59331170856906,7.95285947051099,4.86634870302636,5.38848457835187,3.54767035940102,3.16205228495254,0.196468613246569,0,0.370784442784429,0,0,0,0,0,0,1.39133685156694,0,2.08284300964557,2.26123176769604,0.419499436209906,0.275118041940067,0.835979866147242,1.03366703667732,2.49036383880697,0.66944122552934,0,0.760272105718513,0,0.735326160691737,0.81014194788176,1.60739510911344,0.44905874525234,0.788280363383256,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0,8.44852317882041,6.07826455989983,44.2246663916151,9.46560848471085,2.83734705758686,6.72813120170769,2.1349799145941,1.7266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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-104bp_to_ENST00000533109_5end | |||
|coexpression_cluster_id=C1617 | |||
|description=CAGE_peak_4_at_ENST00000533109_5end | |||
|id=chr11:122051212..122051237,- | |||
|ontology_enrichment_celltype=CL:0000055!2.09e-40!180;CL:0000057!2.14e-23!75;CL:0000680!6.09e-17!57;CL:0000056!6.09e-17!57;CL:0000355!6.09e-17!57;CL:0000187!1.60e-15!54;CL:0000183!2.10e-15!59;CL:0000220!5.45e-15!246;CL:0000222!5.75e-15!119;CL:0002321!1.85e-14!248;CL:0000548!5.98e-13!679;CL:0000004!5.98e-13!679;CL:0000255!5.98e-13!679;CL:0000393!1.50e-12!60;CL:0000211!1.50e-12!60;CL:0000012!2.26e-12!682;CL:0002620!9.83e-12!23;CL:0000144!2.08e-11!625;CL:0000192!2.10e-11!42;CL:0000514!2.10e-11!42;CL:0002371!9.71e-11!591;CL:0000359!7.40e-09!32;CL:0000003!2.90e-08!722 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.08e-13;23!CL:0000057;4.43e-11;73!CL:0000187;1.70e-08;55!CL:0000192;3.03e-07;43!CL:0000359;3.31e-07;32!CL:0002320;3.90e-07;188!CL:0000134;4.22e-07;55!CL:0000048;9.22e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.80e-25,76;CL:0000680,3.71e-15,58;CL:0000056,3.71e-15,58;CL:0000355,3.71e-15,58;CL:0000187,1.45e-13,55;CL:0002620,1.58e-13,23;CL:0000393,2.08e-11,61;CL:0000211,2.08e-11,61;CL:0000222,2.85e-11,121;CL:0000048,3.68e-10,427;CL:0000192,6.16e-10,43;CL:0000514,6.16e-10,43;CL:0000723,1.16e-09,433;CL:0002321,2.96e-09,250;CL:0000034,1.07e-08,441;CL:0000359,8.74e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000355;1.17e-08;58!CL:0000514;3.03e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;5.32e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.15e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.82e-22!83;UBERON:0002329!3.82e-22!83;UBERON:0003077!3.82e-22!83;UBERON:0003059!3.82e-22!83;UBERON:0007282!3.82e-22!83;UBERON:0009618!3.82e-22!83;UBERON:0007285!3.82e-22!83;UBERON:0004290!1.18e-17!70;UBERON:0000486!2.49e-17!82;UBERON:0000475!9.21e-17!365;UBERON:0001134!2.50e-14!61;UBERON:0002036!2.50e-14!61;UBERON:0003082!2.50e-14!61;UBERON:0003102!3.24e-13!95;UBERON:0002385!3.53e-13!63;UBERON:0001015!3.53e-13!63;UBERON:0000383!3.53e-13!63;UBERON:0005256!6.52e-13!143;UBERON:0000490!1.90e-11!138;UBERON:0002100!3.23e-11!216;UBERON:0002049!4.11e-11!79;UBERON:0007798!4.11e-11!79;UBERON:0000119!9.82e-11!312;UBERON:0000483!4.25e-10!309;UBERON:0000481!1.67e-09!347;UBERON:0002097!2.04e-09!40;UBERON:0002199!2.91e-09!45;UBERON:0002416!2.91e-09!45;UBERON:0001637!3.71e-09!42;UBERON:0003509!3.71e-09!42;UBERON:0004572!3.71e-09!42;UBERON:0004535!7.59e-09!110;UBERON:0004872!1.08e-08!84;UBERON:0001981!3.21e-08!60;UBERON:0007500!3.21e-08!60;UBERON:0004537!3.21e-08!60;UBERON:0006965!3.21e-08!60;UBERON:0001009!5.35e-08!113;UBERON:0004573!8.30e-08!33;UBERON:0004571!8.30e-08!33;UBERON:0000055!1.10e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.02e-07;41!UBERON:0002384;5.35e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.86e-16,71;UBERON:0003059,1.86e-16,71;UBERON:0007282,1.86e-16,71;UBERON:0004290,1.86e-16,71;UBERON:0009618,1.86e-16,71;UBERON:0007524,3.48e-16,73;UBERON:0003077,5.73e-16,72;UBERON:0007285,5.73e-16,72;UBERON:0000486,1.03e-14,83;UBERON:0007503,6.26e-14,78;UBERON:0001134,3.62e-13,62;UBERON:0002036,3.62e-13,62;UBERON:0003082,3.62e-13,62;UBERON:0002385,2.78e-12,64;UBERON:0001015,2.78e-12,64;UBERON:0000383,2.78e-12,64;UBERON:0003102,4.62e-11,99;UBERON:0000490,5.92e-11,148;UBERON:0005256,2.79e-10,122;UBERON:0002097,4.67e-10,41;UBERON:0002199,3.96e-09,46;UBERON:0002416,3.96e-09,46;UBERON:0003104,1.90e-08,160;UBERON:0009142,1.90e-08,160;UBERON:0002100,2.49e-07,199 | |||
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| |||
|short_description=p4@ENST00000533109 | |||
}} |
Revision as of 16:17, 10 September 2013
Short description: | p4@ENST00000533109 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ENST00000533109_5end |
Coexpression cluster: | C1617_Fibroblast_meningioma_giant_Smooth_mesenchymal_hepatic_Olfactory |
Association with transcript: | -104bp_to_ENST00000533109_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.80e-25 | 76 |
muscle precursor cell | 3.71e-15 | 58 |
myoblast | 3.71e-15 | 58 |
multi-potent skeletal muscle stem cell | 3.71e-15 | 58 |
muscle cell | 1.45e-13 | 55 |
skin fibroblast | 1.58e-13 | 23 |
electrically responsive cell | 2.08e-11 | 61 |
electrically active cell | 2.08e-11 | 61 |
mesodermal cell | 2.85e-11 | 121 |
multi fate stem cell | 3.68e-10 | 427 |
smooth muscle cell | 6.16e-10 | 43 |
smooth muscle myoblast | 6.16e-10 | 43 |
somatic stem cell | 1.16e-09 | 433 |
embryonic cell | 2.96e-09 | 250 |
stem cell | 1.07e-08 | 441 |
vascular associated smooth muscle cell | 8.74e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
somite | 1.86e-16 | 71 |
presomitic mesoderm | 1.86e-16 | 71 |
presumptive segmental plate | 1.86e-16 | 71 |
dermomyotome | 1.86e-16 | 71 |
trunk paraxial mesoderm | 1.86e-16 | 71 |
dense mesenchyme tissue | 3.48e-16 | 73 |
paraxial mesoderm | 5.73e-16 | 72 |
presumptive paraxial mesoderm | 5.73e-16 | 72 |
multilaminar epithelium | 1.03e-14 | 83 |
epithelial vesicle | 6.26e-14 | 78 |
skeletal muscle tissue | 3.62e-13 | 62 |
striated muscle tissue | 3.62e-13 | 62 |
myotome | 3.62e-13 | 62 |
muscle tissue | 2.78e-12 | 64 |
musculature | 2.78e-12 | 64 |
musculature of body | 2.78e-12 | 64 |
surface structure | 4.62e-11 | 99 |
unilaminar epithelium | 5.92e-11 | 148 |
trunk mesenchyme | 2.79e-10 | 122 |
skin of body | 4.67e-10 | 41 |
integument | 3.96e-09 | 46 |
integumental system | 3.96e-09 | 46 |
mesenchyme | 1.90e-08 | 160 |
entire embryonic mesenchyme | 1.90e-08 | 160 |
trunk | 2.49e-07 | 199 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.15e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.