FFCP PHASE1:Hg19::chr11:112832101..112832112,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4684|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7656|TSSclassifier=S|UniProt=|association_with_transcript=-11bp_to_,11bp_to_ENST00000397957,ENST00000527506,ENST00000528742,ENST00000533760_5end|coexpression_cluster_id=C4|description=CAGE_peak_3_at_NCAM1_5end|id=chr11:112832101..112832112,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;2.74e-11;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.38e-42!115;UBERON:0001049!3.61e-40!57;UBERON:0005068!3.61e-40!57;UBERON:0006241!3.61e-40!57;UBERON:0007135!3.61e-40!57;UBERON:0001017!1.50e-39!82;UBERON:0000073!2.17e-39!94;UBERON:0001016!2.17e-39!94;UBERON:0005743!3.82e-38!86;UBERON:0002616!5.07e-36!59;UBERON:0000955!1.27e-34!69;UBERON:0006238!1.27e-34!69;UBERON:0003075!7.99e-32!86;UBERON:0007284!7.99e-32!86;UBERON:0002346!1.40e-30!90;UBERON:0003080!2.53e-30!42;UBERON:0002780!4.18e-30!41;UBERON:0001890!4.18e-30!41;UBERON:0006240!4.18e-30!41;UBERON:0001893!2.88e-25!34;UBERON:0002020!3.65e-25!34;UBERON:0003528!3.65e-25!34;UBERON:0002791!1.60e-24!33;UBERON:0003056!1.28e-23!61;UBERON:0001869!1.37e-23!32;UBERON:0004121!3.62e-22!169;UBERON:0000924!9.02e-22!173;UBERON:0006601!9.02e-22!173;UBERON:0000956!1.88e-18!25;UBERON:0000203!1.88e-18!25;UBERON:0000153!1.23e-17!129;UBERON:0007811!1.23e-17!129;UBERON:0002619!1.39e-17!22;UBERON:0000033!1.51e-17!123;UBERON:0001950!3.94e-16!20;UBERON:0003076!9.15e-11!15;UBERON:0003057!9.15e-11!15;UBERON:0004732!2.81e-09!13;UBERON:0000025!1.04e-08!194;UBERON:0004733!1.64e-08!12;UBERON:0002028!1.64e-08!12;UBERON:0007277!1.64e-08!12;UBERON:0000119!1.64e-08!312;UBERON:0000483!2.60e-08!309;UBERON:0002420!3.42e-08!9;UBERON:0007245!3.42e-08!9;UBERON:0010009!3.42e-08!9;UBERON:0010011!3.42e-08!9;UBERON:0000454!3.42e-08!9;UBERON:0002308!3.68e-08!9;UBERON:0000125!3.68e-08!9;UBERON:0000475!4.02e-07!365;UBERON:0002298!4.26e-07!8;UBERON:0000481!7.16e-07!347;UBERON:0000468!8.86e-07!659;UBERON:0001871!9.17e-07!7|ontology_enrichment_uberon_v019=UBERON:0002780;2.49e-29;41!UBERON:0001890;2.49e-29;41!UBERON:0001893;3.03e-29;34!UBERON:0003528;4.09e-29;34!UBERON:0002020;4.09e-29;34!UBERON:0002791;6.01e-29;32!UBERON:0001869;7.44e-29;32!UBERON:0000073;1.59e-28;53!UBERON:0002616;1.59e-28;53!UBERON:0000956;7.88e-25;25!UBERON:0000203;7.88e-25;25!UBERON:0002619;1.40e-23;22!UBERON:0001950;1.35e-21;20!UBERON:0001017;1.35e-20;75!UBERON:0000955;1.42e-20;68!UBERON:0001016;3.07e-20;83!UBERON:0007023;4.74e-11;114!UBERON:0004732;5.22e-11;13!UBERON:0002420;1.22e-10;9!UBERON:0007245;1.22e-10;9!UBERON:0010009;1.22e-10;9!UBERON:0010011;1.22e-10;9!UBERON:0000454;1.22e-10;9!UBERON:0000125;1.32e-10;9!UBERON:0002308;1.32e-10;9!UBERON:0004733;5.62e-10;12!UBERON:0002028;5.62e-10;12!UBERON:0009663;1.24e-08;7!UBERON:0001894;6.01e-08;7!UBERON:0001871;8.50e-08;6!UBERON:0002298;8.54e-08;6!UBERON:0011216;2.21e-07;132!UBERON:0000200;2.50e-07;6!UBERON:0002680;5.54e-07;9!UBERON:0001895;5.54e-07;9!UBERON:0001134;7.66e-07;16!UBERON:0002036;7.66e-07;16|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.51e-53,56;UBERON:0005068,7.51e-53,56;UBERON:0006241,7.51e-53,56;UBERON:0007135,7.51e-53,56;UBERON:0001016,3.27e-52,89;UBERON:0001017,1.06e-49,81;UBERON:0000073,1.66e-49,53;UBERON:0002616,1.66e-49,53;UBERON:0000955,3.33e-44,68;UBERON:0006238,3.33e-44,68;UBERON:0003075,3.38e-43,82;UBERON:0007284,3.38e-43,82;UBERON:0007023,1.52e-42,114;UBERON:0002346,2.99e-41,86;UBERON:0002780,1.10e-40,41;UBERON:0001890,1.10e-40,41;UBERON:0003080,1.10e-40,41;UBERON:0006240,1.10e-40,41;UBERON:0001893,4.86e-34,34;UBERON:0003528,6.74e-34,34;UBERON:0002020,6.74e-34,34;UBERON:0003056,3.27e-33,61;UBERON:0010371,6.88e-33,104;UBERON:0002791,7.28e-32,32;UBERON:0001869,9.76e-32,32;UBERON:0010314,3.64e-28,132;UBERON:0004121,7.96e-27,171;UBERON:0000924,7.96e-27,171;UBERON:0006601,7.96e-27,171;UBERON:0000956,1.09e-24,25;UBERON:0000203,1.09e-24,25;UBERON:0002619,1.71e-23,22;UBERON:0001950,1.67e-21,20;UBERON:0011216,3.41e-19,223;UBERON:0003076,6.20e-13,15;UBERON:0003057,6.20e-13,15;UBERON:0004732,6.35e-11,13;UBERON:0002420,1.23e-10,9;UBERON:0007245,1.23e-10,9;UBERON:0010009,1.23e-10,9;UBERON:0010011,1.23e-10,9;UBERON:0000454,1.23e-10,9;UBERON:0000125,1.36e-10,9;UBERON:0002308,1.36e-10,9;UBERON:0000025,5.10e-10,192;UBERON:0004733,6.78e-10,12;UBERON:0002028,6.78e-10,12;UBERON:0007277,6.78e-10,12;UBERON:0000483,7.55e-09,306;UBERON:0009663,1.24e-08,7;UBERON:0000119,1.67e-08,309;UBERON:0001894,5.97e-08,7;UBERON:0006222,5.97e-08,7;UBERON:0002298,8.56e-08,6;UBERON:0001871,1.00e-07,6;UBERON:0000200,2.47e-07,6;UBERON:0002680,6.65e-07,9;UBERON:0001895,6.65e-07,9;UBERON:0010092,6.65e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,1.34465029290355,0.602694528023977,0,0.487932798790507,1.23121058076788,0.612002073732759,1.25381888591235,3.43483184557268,1.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4684 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7656 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_,11bp_to_ENST00000397957,ENST00000527506,ENST00000528742,ENST00000533760_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_NCAM1_5end | |||
|id=chr11:112832101..112832112,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.74e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p3@NCAM1 | |||
}} |
Revision as of 15:45, 10 September 2013
Short description: | p3@NCAM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_NCAM1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -11bp_to_, 11bp_to_ENST00000397957, ENST00000527506, ENST00000528742, ENST00000533760_5end |
EntrezGene: | NCAM1 |
HGNC: | 7656 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.