FFCP PHASE1:Hg19::chr11:101981327..101981348,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10413|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16262|TSSclassifier=S|UniProt=P46937,F5GWC5,F5H202|association_with_transcript=117bp_to_ENST00000345877,ENST00000445250,ENST00000537274,uc001pgs.2,uc001pgt.2,uc001pgu.2,uc001pgv.2_5end|coexpression_cluster_id=C2089|description=CAGE_peak_7_at_YAP1_5end|id=chr11:101981327..101981348,+|ontology_enrichment_celltype=CL:0000055!1.70e-10!180;CL:0000066!6.39e-08!254;CL:0000057!8.39e-08!75|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000057,1.54e-07,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!6.81e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003104!6.59e-13!238;UBERON:0009142!6.59e-13!238;UBERON:0004119!3.79e-12!169;UBERON:0000925!3.79e-12!169;UBERON:0006595!3.79e-12!169;UBERON:0001007!2.21e-11!155;UBERON:0001555!2.21e-11!155;UBERON:0007026!2.21e-11!155;UBERON:0000481!9.73e-11!347;UBERON:0000468!1.19e-10!659;UBERON:0000077!7.23e-10!130;UBERON:0003102!8.53e-09!95;UBERON:0004923!9.22e-09!57;UBERON:0002100!1.29e-08!216;UBERON:0004921!3.47e-08!129;UBERON:0004185!3.47e-08!129;UBERON:0001737!1.12e-07!9;UBERON:0000161!4.14e-07!35;UBERON:0000475!7.05e-07!365;UBERON:0005156!8.10e-07!59;UBERON:0000990!8.10e-07!59;UBERON:0000062!9.42e-07!511;UBERON:0000467!9.86e-07!625|ontology_enrichment_uberon_v019=UBERON:0001737;1.19e-08;9!UBERON:0001557;1.19e-08;9|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.20e-09,160;UBERON:0000925,1.20e-09,160;UBERON:0006595,1.20e-09,160;UBERON:0001007,1.64e-09,145;UBERON:0001555,1.64e-09,145;UBERON:0007026,1.64e-09,145;UBERON:0004923,9.98e-09,66;UBERON:0001737,1.91e-08,9;UBERON:0003102,7.02e-08,99;UBERON:0004921,6.26e-07,118|phase1_expression=3.45188920614058,3.63970890614671,5.63817616383885,7.00513088471913,3.5756887554183,4.36169262050184,0,0,1.04474251279935,1.72013755551056,0.697801167972428,2.40285509343189,1.84636884759917,0.495065411840187,0.331397375727916,0.672325146451775,0,1.46062018077475,0.975865597581014,0.984968464614303,1.02000345622126,0.626909442956176,0.85870796139317,1.64249310087461,1.12988375635323,0,0,0,0,0,0.154816123316076,0.919421224478927,0.6024118375565,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.2786256184353,1.44575660953827,1.50401373190767,2.462390822334,2.3858578411533,1.45990461090791,0.756278537312543,0.221729397462564,0.87834785693126,0.982343066232845,0.364295288292542,1.48313777113772,0,0,0,0,0,0,0.79504962946682,0,1.04142150482278,1.13061588384802,0.419499436209906,1.10047216776027,0.417989933073621,0.258416759169329,0.71153252537342,0.33472061276467,2.01414658554573,1.52054421143703,2.4406205754817,0.367663080345869,0,0.357198913136319,1.12264686313085,1.12611480483322,0,0.949265659568129,0.183201743930407,0,0,1.3082821564276,3.47880366186723,1.8994576749687,1.05927344650575,1.14734648299525,2.4826786753885,1.12135520028461,1.06748995729705,1.48000529050296,3.42332138939743,1.88594940897563,1.9615428373615,1.51357427644931,1.15235184896,1.40592859100278,0.936480230490962,1.71141546463335,1.19558944441441,1.87895197830024,1.61872944368132,3.51127016755621,1.63323337003915,1.84251475967652,1.23990937410919,1.18800285728205,0.494533858557114,1.82032272387605,0,1.85169725349473,1.87677779807946,2.49357703935765,2.63386572528503,2.75839016219118,1.80285670687916,0.794025282120147,1.61450672119976,1.92201649936711,2.96704661623387,1.20036438433761,1.13357782162283,0.515281080091258,1.11670113798954,0.675105328965065,2.14361411354637,1.26216887122057,2.39329736469978,1.77810662500693,1.42003837006646,2.31729825923573,1.01736355386293,2.31913023795956,1.09098448236334,2.00763216772303,1.95157929807353,1.59035721985782,1.85910308591229,1.96956004529204,1.7662459561294,1.09493207722749,3.12899064659632,1.92972281457866,0,0.928735856063958,2.16563844500876,8.99131680302814,8.59781919398319,8.67639707580535,8.71322384585912,11.1118516487127,10.4399072408883,7.14605933248871,8.04508007013919,8.84918460976698,1.4763109092493,0,0.8231480226628,0,0,0.982827216677626,0.590789906681404,0,1.59884970106048,0.514703430895577,1.31700342490351,2.24803506515239,0.804231779293047,1.75918045801206,0.977424915930974,0,0,0.463721619900307,1.40890433082986,0.288732895522148,1.85194205030644,1.52203321787679,0,0,0,0,0,0,1.34385702559088,1.27597587518148,2.50763863567975,1.74380363108377,1.15014803749563,0,0,0,0,0.12624243342638,0.380987365753014,1.14596527667483,1.17217447210047,1.71072446022705,0.308482478109971,0.901029173531752,1.42913216315289,1.34557301214433,1.74384027533312,1.466765716419,2.19761916788222,0,0,2.12750493267896,1.04007436911366,1.80045161983499,2.83698264046557,0.532844358032199,1.14382394926518,1.08524321078289,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10413 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16262 | |||
|TSSclassifier=S | |||
|UniProt=P46937,F5GWC5,F5H202 | |||
|association_with_transcript=117bp_to_ENST00000345877,ENST00000445250,ENST00000537274,uc001pgs.2,uc001pgt.2,uc001pgu.2,uc001pgv.2_5end | |||
|coexpression_cluster_id=C2089 | |||
|description=CAGE_peak_7_at_YAP1_5end | |||
|id=chr11:101981327..101981348,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.70e-10!180;CL:0000066!6.39e-08!254;CL:0000057!8.39e-08!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.54e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.81e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!6.59e-13!238;UBERON:0009142!6.59e-13!238;UBERON:0004119!3.79e-12!169;UBERON:0000925!3.79e-12!169;UBERON:0006595!3.79e-12!169;UBERON:0001007!2.21e-11!155;UBERON:0001555!2.21e-11!155;UBERON:0007026!2.21e-11!155;UBERON:0000481!9.73e-11!347;UBERON:0000468!1.19e-10!659;UBERON:0000077!7.23e-10!130;UBERON:0003102!8.53e-09!95;UBERON:0004923!9.22e-09!57;UBERON:0002100!1.29e-08!216;UBERON:0004921!3.47e-08!129;UBERON:0004185!3.47e-08!129;UBERON:0001737!1.12e-07!9;UBERON:0000161!4.14e-07!35;UBERON:0000475!7.05e-07!365;UBERON:0005156!8.10e-07!59;UBERON:0000990!8.10e-07!59;UBERON:0000062!9.42e-07!511;UBERON:0000467!9.86e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.19e-08;9!UBERON:0001557;1.19e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.20e-09,160;UBERON:0000925,1.20e-09,160;UBERON:0006595,1.20e-09,160;UBERON:0001007,1.64e-09,145;UBERON:0001555,1.64e-09,145;UBERON:0007026,1.64e-09,145;UBERON:0004923,9.98e-09,66;UBERON:0001737,1.91e-08,9;UBERON:0003102,7.02e-08,99;UBERON:0004921,6.26e-07,118 | |||
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| |||
|short_description=p7@YAP1 | |||
}} |
Revision as of 15:19, 10 September 2013
Short description: | p7@YAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_YAP1_5end |
Coexpression cluster: | C2089_pharyngeal_epidermoid_Hep2_rectal_Prostate_gastric_Adipocyte |
Association with transcript: | 117bp_to_ENST00000345877, ENST00000445250, ENST00000537274, uc001pgs.2, uc001pgt.2, uc001pgu.2, uc001pgv.2_5end |
EntrezGene: | YAP1 |
HGNC: | 16262 |
UniProt: | P46937F5GWC5F5H202 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.54e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.20e-09 | 160 |
endoderm | 1.20e-09 | 160 |
presumptive endoderm | 1.20e-09 | 160 |
digestive system | 1.64e-09 | 145 |
digestive tract | 1.64e-09 | 145 |
primitive gut | 1.64e-09 | 145 |
organ component layer | 9.98e-09 | 66 |
larynx | 1.91e-08 | 9 |
surface structure | 7.02e-08 | 99 |
subdivision of digestive tract | 6.26e-07 | 118 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.