FFCP PHASE1:Hg19::chr10:98591637..98591643,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84458|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29503|TSSclassifier=W|UniProt=Q96JN0|association_with_transcript=-373bp_to_ENST00000540664,NM_001170765,NM_001170766_5end|coexpression_cluster_id=C0|description=CAGE_peak_8_at_LCOR_5end|id=chr10:98591637..98591643,+|ontology_enrichment_celltype=CL:0000037!1.12e-59!172;CL:0000566!1.12e-59!172;CL:0000988!6.67e-57!182;CL:0002032!1.86e-54!165;CL:0000837!1.86e-54!165;CL:0000738!4.13e-53!140;CL:0002031!6.92e-48!124;CL:0002087!1.78e-46!119;CL:0000763!1.60e-43!112;CL:0000049!1.60e-43!112;CL:0000766!8.18e-40!76;CL:0000557!1.14e-39!71;CL:0000839!3.65e-39!70;CL:0002009!7.10e-38!65;CL:0002194!8.12e-37!63;CL:0000576!8.12e-37!63;CL:0000040!8.12e-37!63;CL:0000559!8.12e-37!63;CL:0002057!3.07e-32!42;CL:0000860!1.89e-31!45;CL:0000134!8.99e-13!358;CL:0002320!9.23e-12!365;CL:0000542!4.92e-10!53;CL:0000051!4.92e-10!53;CL:0000219!6.92e-10!390;CL:0000838!1.04e-09!52;CL:0002393!9.53e-08!9;CL:0002397!9.53e-08!9|ontology_enrichment_celltype_v019=CL:0000860;1.05e-54;33!CL:0002057;1.05e-54;33!CL:0000473;4.73e-47;39!CL:0000234;4.73e-47;39!CL:0000576;6.10e-44;48!CL:0000766;1.11e-34;69!CL:0000763;1.24e-20;100!CL:0002087;3.66e-18;104!CL:0000738;3.99e-16;136!CL:0000988;1.09e-12;177!CL:0002393;1.51e-11;6!CL:0002397;1.51e-11;6!CL:0000219;2.66e-08;193!CL:0000451;7.76e-08;10!CL:0000840;8.35e-08;5!CL:0000094;1.13e-07;8!CL:0000784;6.46e-07;3|ontology_enrichment_celltype_v019_2=CL:0000766,7.76e-83,72;CL:0000839,3.87e-79,66;CL:0000473,3.26e-78,48;CL:0000234,3.26e-78,48;CL:0000557,4.17e-78,67;CL:0000037,6.04e-78,168;CL:0002009,1.37e-77,61;CL:0002194,2.30e-77,59;CL:0000576,2.30e-77,59;CL:0000040,2.30e-77,59;CL:0000559,2.30e-77,59;CL:0000860,1.66e-76,42;CL:0002057,1.66e-76,42;CL:0000738,3.01e-76,136;CL:0000988,9.07e-73,177;CL:0000763,2.29e-72,108;CL:0000049,2.29e-72,108;CL:0002032,1.93e-69,161;CL:0000837,1.93e-69,161;CL:0002031,9.72e-68,120;CL:0002087,3.92e-67,115;CL:0000134,5.74e-28,354;CL:0002320,5.97e-27,361;CL:0000219,2.26e-23,386;CL:0000048,5.20e-19,427;CL:0000034,1.89e-18,441;CL:0000723,2.07e-18,433;CL:0002393,1.41e-16,9;CL:0002397,1.41e-16,9;CL:0000451,5.56e-08,10;CL:0000840,6.04e-08,5;CL:0001029,6.04e-08,5;CL:0000094,7.57e-08,8;CL:0000784,4.58e-07,3|ontology_enrichment_development_v019=CL:0002057;6.28e-54;42!CL:0000049;1.94e-19;108|ontology_enrichment_disease=DOID:2531!9.63e-08!51;DOID:0060083!9.63e-08!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.89e-40!102;UBERON:0003061!9.89e-40!102;UBERON:0002193!3.20e-34!112;UBERON:0002371!9.69e-34!80;UBERON:0001474!1.38e-29!86;UBERON:0002405!8.26e-27!115;UBERON:0004765!1.83e-21!101;UBERON:0001434!1.83e-21!101;UBERON:0002384!2.12e-11!375;UBERON:0003081!4.81e-09!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.08e-70,76;UBERON:0002390,1.17e-69,98;UBERON:0003061,1.17e-69,98;UBERON:0001474,1.82e-63,82;UBERON:0002193,1.95e-61,108;UBERON:0002405,5.85e-58,93;UBERON:0004765,2.62e-56,90;UBERON:0001434,5.72e-49,100;UBERON:0003081,6.37e-27,203;UBERON:0002384,1.45e-25,371;UBERON:0002204,1.33e-22,167;UBERON:0000926,1.24e-12,315;UBERON:0004120,1.24e-12,315;UBERON:0006603,1.24e-12,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0.251085279189606,0.0764134057479513,0.246301768349837,0.314843125254717,3.14691421479123,1.53531759238885,1.23852898652861,0.919421224478927,0,0,1.62681121218633,0.568676929949686,4.11040615068786,9.41792194504192,5.21415563422368,2.17010870715852,0.671746422719773,0.971680998056939,1.28787783817093,1.45398238779565,1.88937971844405,2.42584061187816,3.25400651667958,1.6446715520873,3.09706370895104,9.20615655430881,6.14785695669842,6.85798466676897,6.55016793399575,1.29096936716765,4.06279459783025,2.44715041405386,2.18324920046277,2.47195832889593,4.28517449319264,5.45579346029359,8.31138263538754,7.25672860410775,6.78176435913548,7.6720455095885,4.35313857942876,7.94339314567596,6.85104473895132,4.01997864410789,4.69334626578181,10.4250645458456,3.02699751316684,6.62899744777616,5.37986058649504,1.47878700418359,1.4882300997553,2.09658645508376,1.23561494261145,1.05123824989054,1.76798145366788,2.85012743741249,1.79025009479181,2.19196984517561,0,1.09227722252426,1.77901850772711,1.70692089026603,0.400395987036012,0,0.661044872784862,0,3.41527781465669,1.17447437874188,3.44045905312706,0,3.92355994087075,0,0.393419540227666,0.393010762749165,1.43921049299656,0,0.32592226663359,0.946895611469467,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0.766440987203842,0,0,0.95569624297229,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,1.20964045934839,2.13952156626806,1.15859523106239,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0.196468613246569,0,0,3.24547393654683,1.21890816109487,1.72845348674525,2.8618874916641,2.85997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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84458 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29503 | |||
|TSSclassifier=W | |||
|UniProt=Q96JN0 | |||
|association_with_transcript=-373bp_to_ENST00000540664,NM_001170765,NM_001170766_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_8_at_LCOR_5end | |||
|id=chr10:98591637..98591643,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.12e-59!172;CL:0000566!1.12e-59!172;CL:0000988!6.67e-57!182;CL:0002032!1.86e-54!165;CL:0000837!1.86e-54!165;CL:0000738!4.13e-53!140;CL:0002031!6.92e-48!124;CL:0002087!1.78e-46!119;CL:0000763!1.60e-43!112;CL:0000049!1.60e-43!112;CL:0000766!8.18e-40!76;CL:0000557!1.14e-39!71;CL:0000839!3.65e-39!70;CL:0002009!7.10e-38!65;CL:0002194!8.12e-37!63;CL:0000576!8.12e-37!63;CL:0000040!8.12e-37!63;CL:0000559!8.12e-37!63;CL:0002057!3.07e-32!42;CL:0000860!1.89e-31!45;CL:0000134!8.99e-13!358;CL:0002320!9.23e-12!365;CL:0000542!4.92e-10!53;CL:0000051!4.92e-10!53;CL:0000219!6.92e-10!390;CL:0000838!1.04e-09!52;CL:0002393!9.53e-08!9;CL:0002397!9.53e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.05e-54;33!CL:0002057;1.05e-54;33!CL:0000473;4.73e-47;39!CL:0000234;4.73e-47;39!CL:0000576;6.10e-44;48!CL:0000766;1.11e-34;69!CL:0000763;1.24e-20;100!CL:0002087;3.66e-18;104!CL:0000738;3.99e-16;136!CL:0000988;1.09e-12;177!CL:0002393;1.51e-11;6!CL:0002397;1.51e-11;6!CL:0000219;2.66e-08;193!CL:0000451;7.76e-08;10!CL:0000840;8.35e-08;5!CL:0000094;1.13e-07;8!CL:0000784;6.46e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.76e-83,72;CL:0000839,3.87e-79,66;CL:0000473,3.26e-78,48;CL:0000234,3.26e-78,48;CL:0000557,4.17e-78,67;CL:0000037,6.04e-78,168;CL:0002009,1.37e-77,61;CL:0002194,2.30e-77,59;CL:0000576,2.30e-77,59;CL:0000040,2.30e-77,59;CL:0000559,2.30e-77,59;CL:0000860,1.66e-76,42;CL:0002057,1.66e-76,42;CL:0000738,3.01e-76,136;CL:0000988,9.07e-73,177;CL:0000763,2.29e-72,108;CL:0000049,2.29e-72,108;CL:0002032,1.93e-69,161;CL:0000837,1.93e-69,161;CL:0002031,9.72e-68,120;CL:0002087,3.92e-67,115;CL:0000134,5.74e-28,354;CL:0002320,5.97e-27,361;CL:0000219,2.26e-23,386;CL:0000048,5.20e-19,427;CL:0000034,1.89e-18,441;CL:0000723,2.07e-18,433;CL:0002393,1.41e-16,9;CL:0002397,1.41e-16,9;CL:0000451,5.56e-08,10;CL:0000840,6.04e-08,5;CL:0001029,6.04e-08,5;CL:0000094,7.57e-08,8;CL:0000784,4.58e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.28e-54;42!CL:0000049;1.94e-19;108 | |||
|ontology_enrichment_disease=DOID:2531!9.63e-08!51;DOID:0060083!9.63e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.89e-40!102;UBERON:0003061!9.89e-40!102;UBERON:0002193!3.20e-34!112;UBERON:0002371!9.69e-34!80;UBERON:0001474!1.38e-29!86;UBERON:0002405!8.26e-27!115;UBERON:0004765!1.83e-21!101;UBERON:0001434!1.83e-21!101;UBERON:0002384!2.12e-11!375;UBERON:0003081!4.81e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.08e-70,76;UBERON:0002390,1.17e-69,98;UBERON:0003061,1.17e-69,98;UBERON:0001474,1.82e-63,82;UBERON:0002193,1.95e-61,108;UBERON:0002405,5.85e-58,93;UBERON:0004765,2.62e-56,90;UBERON:0001434,5.72e-49,100;UBERON:0003081,6.37e-27,203;UBERON:0002384,1.45e-25,371;UBERON:0002204,1.33e-22,167;UBERON:0000926,1.24e-12,315;UBERON:0004120,1.24e-12,315;UBERON:0006603,1.24e-12,315 | |||
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| |||
|short_description=p8@LCOR | |||
}} |
Revision as of 15:13, 10 September 2013
Short description: | p8@LCOR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_LCOR_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -373bp_to_ENST00000540664, NM_001170765, NM_001170766_5end |
EntrezGene: | LCOR |
HGNC: | 29503 |
UniProt: | Q96JN0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.08e-70 | 76 |
hematopoietic system | 1.17e-69 | 98 |
blood island | 1.17e-69 | 98 |
bone element | 1.82e-63 | 82 |
hemolymphoid system | 1.95e-61 | 108 |
immune system | 5.85e-58 | 93 |
skeletal element | 2.62e-56 | 90 |
skeletal system | 5.72e-49 | 100 |
lateral plate mesoderm | 6.37e-27 | 203 |
connective tissue | 1.45e-25 | 371 |
musculoskeletal system | 1.33e-22 | 167 |
mesoderm | 1.24e-12 | 315 |
mesoderm-derived structure | 1.24e-12 | 315 |
presumptive mesoderm | 1.24e-12 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.