FFCP PHASE1:Hg19::chr10:81003229..81003240,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57178|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16493|TSSclassifier=W|UniProt=|association_with_transcript=-184bp_to_uc001kag.2_5end|description=CAGE_peak_13_at_ZMIZ1_5end|id=chr10:81003229..81003240,+|ontology_enrichment_celltype=CL:0002057!2.74e-27!42;CL:0000860!1.71e-24!45;CL:0000766!2.11e-24!76;CL:0000738!7.63e-23!140;CL:0002009!1.85e-20!65;CL:0000557!2.11e-20!71;CL:0002194!4.27e-19!63;CL:0000576!4.27e-19!63;CL:0000040!4.27e-19!63;CL:0000559!4.27e-19!63;CL:0000839!1.43e-18!70;CL:0002087!5.30e-18!119;CL:0002031!2.50e-17!124;CL:0000037!3.36e-15!172;CL:0000566!3.36e-15!172;CL:0002032!4.73e-15!165;CL:0000837!4.73e-15!165;CL:0000988!1.34e-14!182;CL:0000763!1.86e-14!112;CL:0000049!1.86e-14!112|ontology_enrichment_celltype_v019=CL:0000860;1.10e-39;33!CL:0002057;1.10e-39;33!CL:0000473;1.01e-30;39!CL:0000234;1.01e-30;39!CL:0000576;4.45e-23;48!CL:0000766;1.08e-19;69!CL:0000094;3.80e-08;8!CL:0000763;6.99e-08;100!CL:0000123;7.61e-07;2!CL:0000242;7.61e-07;2!CL:0000771;8.04e-07;2|ontology_enrichment_celltype_v019_2=CL:0000860,3.86e-42,42;CL:0002057,3.86e-42,42;CL:0000473,1.98e-38,48;CL:0000234,1.98e-38,48;CL:0000766,1.16e-34,72;CL:0002009,6.93e-30,61;CL:0002194,4.83e-29,59;CL:0000576,4.83e-29,59;CL:0000040,4.83e-29,59;CL:0000559,4.83e-29,59;CL:0000557,2.05e-28,67;CL:0000839,5.04e-27,66;CL:0000763,2.81e-21,108;CL:0000049,2.81e-21,108;CL:0000738,4.90e-16,136;CL:0002031,2.93e-12,120;CL:0002087,3.44e-12,115;CL:0002032,4.44e-12,161;CL:0000837,4.44e-12,161;CL:0000037,3.42e-11,168;CL:0000988,3.67e-10,177;CL:0000094,3.38e-08,8;CL:0000771,7.23e-07,2;CL:0000242,7.64e-07,2|ontology_enrichment_development_v019=CL:0002057;7.98e-32;42!UBERON:0006241;2.60e-08;3!UBERON:0003057;2.60e-08;3!CL:0000049;9.67e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.46e-33!57;UBERON:0005068!4.46e-33!57;UBERON:0006241!4.46e-33!57;UBERON:0007135!4.46e-33!57;UBERON:0001017!1.53e-31!82;UBERON:0000073!1.05e-30!94;UBERON:0001016!1.05e-30!94;UBERON:0005743!2.69e-30!86;UBERON:0002780!3.41e-27!41;UBERON:0001890!3.41e-27!41;UBERON:0006240!3.41e-27!41;UBERON:0003080!3.22e-26!42;UBERON:0002616!3.43e-26!59;UBERON:0000955!4.27e-24!69;UBERON:0006238!4.27e-24!69;UBERON:0002020!2.20e-23!34;UBERON:0003528!2.20e-23!34;UBERON:0001893!4.80e-23!34;UBERON:0002791!2.90e-22!33;UBERON:0001869!1.28e-21!32;UBERON:0003075!1.20e-19!86;UBERON:0007284!1.20e-19!86;UBERON:0002371!3.24e-18!80;UBERON:0002346!5.60e-18!90;UBERON:0007023!8.78e-18!115;UBERON:0002390!6.69e-17!102;UBERON:0003061!6.69e-17!102;UBERON:0001474!1.74e-16!86;UBERON:0000956!1.84e-16!25;UBERON:0000203!1.84e-16!25;UBERON:0003056!7.98e-16!61;UBERON:0001950!3.36e-15!20;UBERON:0002619!7.84e-15!22;UBERON:0002193!1.78e-14!112;UBERON:0004765!1.88e-14!101;UBERON:0001434!1.88e-14!101;UBERON:0004121!7.66e-12!169;UBERON:0000924!4.22e-11!173;UBERON:0006601!4.22e-11!173;UBERON:0002405!1.55e-10!115;UBERON:0000033!2.33e-09!123;UBERON:0002308!1.85e-08!9;UBERON:0000125!1.85e-08!9;UBERON:0000153!2.99e-08!129;UBERON:0007811!2.99e-08!129;UBERON:0002420!3.16e-08!9;UBERON:0007245!3.16e-08!9;UBERON:0010009!3.16e-08!9;UBERON:0010011!3.16e-08!9;UBERON:0000454!3.16e-08!9;UBERON:0003076!5.06e-08!15;UBERON:0003057!5.06e-08!15|ontology_enrichment_uberon_v019=UBERON:0002298;1.25e-14;6!UBERON:0001950;5.47e-10;20!UBERON:0000073;1.70e-09;53!UBERON:0002616;1.70e-09;53!UBERON:0002619;6.09e-09;22!UBERON:0004732;9.64e-09;13!UBERON:0001896;2.60e-08;3!UBERON:0002240;2.60e-08;3!UBERON:0005174;2.60e-08;3!UBERON:0005290;2.60e-08;3!UBERON:0001137;2.60e-08;3!UBERON:0002021;3.06e-08;5!UBERON:0000988;5.37e-08;3!UBERON:0002780;1.06e-07;41!UBERON:0001890;1.06e-07;41!UBERON:0000956;1.12e-07;25!UBERON:0000203;1.12e-07;25!UBERON:0003528;1.88e-07;34!UBERON:0002020;1.88e-07;34!UBERON:0001016;3.45e-07;83!UBERON:0004733;5.97e-07;12!UBERON:0002028;5.97e-07;12!UBERON:0000955;7.05e-07;68|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.43e-26,76;UBERON:0001474,2.47e-23,82;UBERON:0004765,1.69e-20,90;UBERON:0002405,1.46e-19,93;UBERON:0001016,1.50e-19,89;UBERON:0001434,6.86e-19,100;UBERON:0001049,8.56e-19,56;UBERON:0005068,8.56e-19,56;UBERON:0006241,8.56e-19,56;UBERON:0007135,8.56e-19,56;UBERON:0002390,3.94e-18,98;UBERON:0003061,3.94e-18,98;UBERON:0001017,1.03e-17,81;UBERON:0002193,1.13e-15,108;UBERON:0000073,9.19e-15,53;UBERON:0002616,9.19e-15,53;UBERON:0002298,2.07e-14,6;UBERON:0003075,3.26e-12,82;UBERON:0007284,3.26e-12,82;UBERON:0003076,5.59e-12,15;UBERON:0003057,5.59e-12,15;UBERON:0000955,2.13e-11,68;UBERON:0006238,2.13e-11,68;UBERON:0002346,2.32e-11,86;UBERON:0010371,2.42e-11,104;UBERON:0001950,5.94e-10,20;UBERON:0002780,9.36e-10,41;UBERON:0001890,9.36e-10,41;UBERON:0003080,9.36e-10,41;UBERON:0006240,9.36e-10,41;UBERON:0003528,4.88e-09,34;UBERON:0002020,4.88e-09,34;UBERON:0002619,6.56e-09,22;UBERON:0004121,1.10e-08,171;UBERON:0000924,1.10e-08,171;UBERON:0006601,1.10e-08,171;UBERON:0004732,1.27e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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57178 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16493 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-184bp_to_uc001kag.2_5end | |||
|description=CAGE_peak_13_at_ZMIZ1_5end | |||
|id=chr10:81003229..81003240,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.74e-27!42;CL:0000860!1.71e-24!45;CL:0000766!2.11e-24!76;CL:0000738!7.63e-23!140;CL:0002009!1.85e-20!65;CL:0000557!2.11e-20!71;CL:0002194!4.27e-19!63;CL:0000576!4.27e-19!63;CL:0000040!4.27e-19!63;CL:0000559!4.27e-19!63;CL:0000839!1.43e-18!70;CL:0002087!5.30e-18!119;CL:0002031!2.50e-17!124;CL:0000037!3.36e-15!172;CL:0000566!3.36e-15!172;CL:0002032!4.73e-15!165;CL:0000837!4.73e-15!165;CL:0000988!1.34e-14!182;CL:0000763!1.86e-14!112;CL:0000049!1.86e-14!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.10e-39;33!CL:0002057;1.10e-39;33!CL:0000473;1.01e-30;39!CL:0000234;1.01e-30;39!CL:0000576;4.45e-23;48!CL:0000766;1.08e-19;69!CL:0000094;3.80e-08;8!CL:0000763;6.99e-08;100!CL:0000123;7.61e-07;2!CL:0000242;7.61e-07;2!CL:0000771;8.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.86e-42,42;CL:0002057,3.86e-42,42;CL:0000473,1.98e-38,48;CL:0000234,1.98e-38,48;CL:0000766,1.16e-34,72;CL:0002009,6.93e-30,61;CL:0002194,4.83e-29,59;CL:0000576,4.83e-29,59;CL:0000040,4.83e-29,59;CL:0000559,4.83e-29,59;CL:0000557,2.05e-28,67;CL:0000839,5.04e-27,66;CL:0000763,2.81e-21,108;CL:0000049,2.81e-21,108;CL:0000738,4.90e-16,136;CL:0002031,2.93e-12,120;CL:0002087,3.44e-12,115;CL:0002032,4.44e-12,161;CL:0000837,4.44e-12,161;CL:0000037,3.42e-11,168;CL:0000988,3.67e-10,177;CL:0000094,3.38e-08,8;CL:0000771,7.23e-07,2;CL:0000242,7.64e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;7.98e-32;42!UBERON:0006241;2.60e-08;3!UBERON:0003057;2.60e-08;3!CL:0000049;9.67e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.46e-33!57;UBERON:0005068!4.46e-33!57;UBERON:0006241!4.46e-33!57;UBERON:0007135!4.46e-33!57;UBERON:0001017!1.53e-31!82;UBERON:0000073!1.05e-30!94;UBERON:0001016!1.05e-30!94;UBERON:0005743!2.69e-30!86;UBERON:0002780!3.41e-27!41;UBERON:0001890!3.41e-27!41;UBERON:0006240!3.41e-27!41;UBERON:0003080!3.22e-26!42;UBERON:0002616!3.43e-26!59;UBERON:0000955!4.27e-24!69;UBERON:0006238!4.27e-24!69;UBERON:0002020!2.20e-23!34;UBERON:0003528!2.20e-23!34;UBERON:0001893!4.80e-23!34;UBERON:0002791!2.90e-22!33;UBERON:0001869!1.28e-21!32;UBERON:0003075!1.20e-19!86;UBERON:0007284!1.20e-19!86;UBERON:0002371!3.24e-18!80;UBERON:0002346!5.60e-18!90;UBERON:0007023!8.78e-18!115;UBERON:0002390!6.69e-17!102;UBERON:0003061!6.69e-17!102;UBERON:0001474!1.74e-16!86;UBERON:0000956!1.84e-16!25;UBERON:0000203!1.84e-16!25;UBERON:0003056!7.98e-16!61;UBERON:0001950!3.36e-15!20;UBERON:0002619!7.84e-15!22;UBERON:0002193!1.78e-14!112;UBERON:0004765!1.88e-14!101;UBERON:0001434!1.88e-14!101;UBERON:0004121!7.66e-12!169;UBERON:0000924!4.22e-11!173;UBERON:0006601!4.22e-11!173;UBERON:0002405!1.55e-10!115;UBERON:0000033!2.33e-09!123;UBERON:0002308!1.85e-08!9;UBERON:0000125!1.85e-08!9;UBERON:0000153!2.99e-08!129;UBERON:0007811!2.99e-08!129;UBERON:0002420!3.16e-08!9;UBERON:0007245!3.16e-08!9;UBERON:0010009!3.16e-08!9;UBERON:0010011!3.16e-08!9;UBERON:0000454!3.16e-08!9;UBERON:0003076!5.06e-08!15;UBERON:0003057!5.06e-08!15 | |||
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| |||
|short_description=p13@ZMIZ1 | |||
}} |
Revision as of 14:33, 10 September 2013
Short description: | p13@ZMIZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_ZMIZ1_5end |
Coexpression cluster: | NA |
Association with transcript: | -184bp_to_uc001kag.2_5end |
EntrezGene: | ZMIZ1 |
HGNC: | 16493 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.86e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.86e-42 | 42 |
defensive cell | 1.98e-38 | 48 |
phagocyte | 1.98e-38 | 48 |
myeloid leukocyte | 1.16e-34 | 72 |
macrophage dendritic cell progenitor | 6.93e-30 | 61 |
monopoietic cell | 4.83e-29 | 59 |
monocyte | 4.83e-29 | 59 |
monoblast | 4.83e-29 | 59 |
promonocyte | 4.83e-29 | 59 |
granulocyte monocyte progenitor cell | 2.05e-28 | 67 |
myeloid lineage restricted progenitor cell | 5.04e-27 | 66 |
myeloid cell | 2.81e-21 | 108 |
common myeloid progenitor | 2.81e-21 | 108 |
leukocyte | 4.90e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 2.93e-12 | 120 |
nongranular leukocyte | 3.44e-12 | 115 |
hematopoietic oligopotent progenitor cell | 4.44e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.44e-12 | 161 |
hematopoietic stem cell | 3.42e-11 | 168 |
hematopoietic cell | 3.67e-10 | 177 |
granulocyte | 3.38e-08 | 8 |
eosinophil | 7.23e-07 | 2 |
Merkel cell | 7.64e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.