FFCP PHASE1:Hg19::chr10:33247124..33247207,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6153 | |||
|TSSclassifier=S | |||
|UniProt=P05556,Q5T3E4,Q5T3E5,C9JPK5,E7EUI6 | |||
|association_with_transcript=0bp_to_ENST00000302278,ENST00000374956,ENST00000414670,ENST00000417122,ENST00000474568,ENST00000484088,ENST00000488494_5end | |||
|coexpression_cluster_id=C3013 | |||
|description=CAGE_peak_1_at_ITGB1_5end | |||
|id=chr10:33247124..33247207,- | |||
|ontology_enrichment_celltype=CL:0000055!1.06e-21!180;CL:0000057!1.31e-16!75;CL:0000680!1.06e-11!57;CL:0000056!1.06e-11!57;CL:0000355!1.06e-11!57;CL:0000222!1.89e-11!119;CL:0000548!2.28e-11!679;CL:0000004!2.28e-11!679;CL:0000255!2.28e-11!679;CL:0000187!1.05e-10!54;CL:0000220!1.16e-10!246;CL:0000012!1.42e-10!682;CL:0002371!1.46e-10!591;CL:0002321!2.66e-10!248;CL:0000144!4.14e-10!625;CL:0002620!1.13e-09!23;CL:0000359!1.28e-09!32;CL:0000192!9.32e-09!42;CL:0000514!9.32e-09!42;CL:0000183!3.65e-08!59;CL:0000393!6.35e-08!60;CL:0000211!6.35e-08!60;CL:0002334!7.13e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.13e-09;23!CL:0000359;5.43e-09;32!CL:0000134;2.30e-07;55!CL:0002334;7.17e-07;12 | |||
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| |||
|short_description=p1@ITGB1 | |||
}} |
Revision as of 13:13, 10 September 2013
Short description: | p1@ITGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ITGB1_5end |
Coexpression cluster: | C3013_Smooth_Fibroblast_hepatic_mesenchymal_basal_spindle_Mesothelial |
Association with transcript: | 0bp_to_ENST00000302278, ENST00000374956, ENST00000414670, ENST00000417122, ENST00000474568, ENST00000484088, ENST00000488494_5end |
EntrezGene: | ITGB1 |
HGNC: | 6153 |
UniProt: | P05556Q5T3E4Q5T3E5C9JPK5E7EUI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.54e-17 | 76 |
muscle precursor cell | 7.36e-12 | 58 |
myoblast | 7.36e-12 | 58 |
multi-potent skeletal muscle stem cell | 7.36e-12 | 58 |
mesodermal cell | 1.99e-11 | 121 |
muscle cell | 7.29e-11 | 55 |
embryonic cell | 2.42e-10 | 250 |
skin fibroblast | 1.13e-09 | 23 |
vascular associated smooth muscle cell | 1.28e-09 | 32 |
smooth muscle cell | 6.51e-09 | 43 |
smooth muscle myoblast | 6.51e-09 | 43 |
electrically responsive cell | 4.44e-08 | 61 |
electrically active cell | 4.44e-08 | 61 |
preadipocyte | 7.13e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.37e-09 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.