FFCP PHASE1:Hg19::chr10:115085969..115085982,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr10:115085969..115085982,-|id=chr10:115085969..115085982,-|ontology_enrichment_celltype=CL:0002057!1.54e-77!42;CL:0000860!5.88e-72!45;CL:0002009!1.16e-58!65;CL:0000557!3.25e-53!71;CL:0000766!3.66e-53!76;CL:0002194!1.37e-52!63;CL:0000576!1.37e-52!63;CL:0000040!1.37e-52!63;CL:0000559!1.37e-52!63;CL:0000839!8.95e-47!70;CL:0000763!4.78e-39!112;CL:0000049!4.78e-39!112;CL:0000738!1.04e-38!140;CL:0002087!9.09e-34!119;CL:0002031!3.99e-32!124;CL:0000037!3.80e-30!172;CL:0000566!3.80e-30!172;CL:0000988!4.40e-28!182;CL:0002032!7.06e-28!165;CL:0000837!7.06e-28!165;CL:0000767!6.95e-15!3;CL:0000134!2.80e-14!358;CL:0002320!7.51e-14!365;CL:0000219!2.43e-12!390;CL:0000034!9.89e-12!444;CL:0000048!1.57e-10!430;CL:0000723!2.84e-10!436;CL:0001014!5.32e-10!2;CL:0001016!5.32e-10!2;CL:0000840!2.52e-07!5;CL:0001029!2.52e-07!5;CL:0000842!5.72e-07!3;CL:0000623!6.09e-07!3;CL:0000825!6.09e-07!3|ontology_enrichment_celltype_v019=CL:0000860;3.41e-57;33!CL:0002057;3.41e-57;33!CL:0000473;2.17e-39;39!CL:0000234;2.17e-39;39!CL:0000576;1.65e-33;48!CL:0000766;1.25e-27;69!CL:0000767;1.12e-24;3!CL:0000763;4.01e-14;100!CL:0002393;2.51e-13;6!CL:0002397;2.51e-13;6!CL:0002087;8.87e-13;104!CL:0000094;1.25e-09;8!CL:0000081;3.89e-07;11|ontology_enrichment_celltype_v019_2=CL:0000860,7.77e-69,42;CL:0002057,7.77e-69,42;CL:0000473,7.37e-60,48;CL:0000234,7.37e-60,48;CL:0000766,7.55e-52,72;CL:0002194,2.77e-47,59;CL:0000576,2.77e-47,59;CL:0000040,2.77e-47,59;CL:0000559,2.77e-47,59;CL:0002009,1.17e-45,61;CL:0000839,5.04e-42,66;CL:0000557,2.32e-41,67;CL:0000763,1.23e-33,108;CL:0000049,1.23e-33,108;CL:0000738,4.51e-26,136;CL:0000767,1.07e-24,3;CL:0002087,6.02e-23,115;CL:0002031,7.24e-22,120;CL:0002032,1.61e-21,161;CL:0000837,1.61e-21,161;CL:0000037,1.75e-20,168;CL:0000988,2.85e-19,177;CL:0000094,1.23e-09,8;CL:0002393,4.56e-09,9;CL:0002397,4.56e-09,9;CL:0000134,7.50e-08,354;CL:0002320,1.26e-07,361;CL:0000034,3.01e-07,441;CL:0000081,3.85e-07,11;CL:0000219,7.82e-07,386|ontology_enrichment_development_v019=CL:0002057;1.53e-46;42!CL:0000049;6.22e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.48e-46!80;UBERON:0001474!7.01e-43!86;UBERON:0002390!1.68e-40!102;UBERON:0003061!1.68e-40!102;UBERON:0002193!2.70e-36!112;UBERON:0004765!1.39e-35!101;UBERON:0001434!1.39e-35!101;UBERON:0002405!1.78e-30!115;UBERON:0002204!5.87e-19!167;UBERON:0003081!9.32e-17!216;UBERON:0002384!2.89e-13!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.64e-36,76;UBERON:0001474,2.51e-33,82;UBERON:0004765,4.03e-30,90;UBERON:0002405,4.64e-29,93;UBERON:0002390,1.97e-27,98;UBERON:0003061,1.97e-27,98;UBERON:0001434,7.93e-27,100;UBERON:0002193,1.26e-24,108;UBERON:0002204,7.68e-15,167;UBERON:0003081,1.22e-11,203;UBERON:0002384,2.55e-07,371|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,1.53531759238885,1.08371286321253,0,0,0,0,0,0,13.2958898047651,3.81034450193269,4.34021741431704,0,0,0,0,0,0,0.232429036905685,0,0.929119112685311,0.575384784644301,2.0492856522328,5.20260905754887,25.5111803745098,12.2642089880927,9.47985406160392,0.376484679085209,0.818718450173537,0.674170453335254,29.3840536676066,49.1021411426423,40.9175760511386,0,0.199463657621632,0.426224750532694,2.03146467040009,3.40431134814684,1.24564449799115,1.00499466102697,0,2.82345498116652,2.42159801053347,3.68277635987565,7.59509729858123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.7738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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:115085969..115085982,- | |||
|id=chr10:115085969..115085982,- | |||
|ontology_enrichment_celltype=CL:0002057!1.54e-77!42;CL:0000860!5.88e-72!45;CL:0002009!1.16e-58!65;CL:0000557!3.25e-53!71;CL:0000766!3.66e-53!76;CL:0002194!1.37e-52!63;CL:0000576!1.37e-52!63;CL:0000040!1.37e-52!63;CL:0000559!1.37e-52!63;CL:0000839!8.95e-47!70;CL:0000763!4.78e-39!112;CL:0000049!4.78e-39!112;CL:0000738!1.04e-38!140;CL:0002087!9.09e-34!119;CL:0002031!3.99e-32!124;CL:0000037!3.80e-30!172;CL:0000566!3.80e-30!172;CL:0000988!4.40e-28!182;CL:0002032!7.06e-28!165;CL:0000837!7.06e-28!165;CL:0000767!6.95e-15!3;CL:0000134!2.80e-14!358;CL:0002320!7.51e-14!365;CL:0000219!2.43e-12!390;CL:0000034!9.89e-12!444;CL:0000048!1.57e-10!430;CL:0000723!2.84e-10!436;CL:0001014!5.32e-10!2;CL:0001016!5.32e-10!2;CL:0000840!2.52e-07!5;CL:0001029!2.52e-07!5;CL:0000842!5.72e-07!3;CL:0000623!6.09e-07!3;CL:0000825!6.09e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.41e-57;33!CL:0002057;3.41e-57;33!CL:0000473;2.17e-39;39!CL:0000234;2.17e-39;39!CL:0000576;1.65e-33;48!CL:0000766;1.25e-27;69!CL:0000767;1.12e-24;3!CL:0000763;4.01e-14;100!CL:0002393;2.51e-13;6!CL:0002397;2.51e-13;6!CL:0002087;8.87e-13;104!CL:0000094;1.25e-09;8!CL:0000081;3.89e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.77e-69,42;CL:0002057,7.77e-69,42;CL:0000473,7.37e-60,48;CL:0000234,7.37e-60,48;CL:0000766,7.55e-52,72;CL:0002194,2.77e-47,59;CL:0000576,2.77e-47,59;CL:0000040,2.77e-47,59;CL:0000559,2.77e-47,59;CL:0002009,1.17e-45,61;CL:0000839,5.04e-42,66;CL:0000557,2.32e-41,67;CL:0000763,1.23e-33,108;CL:0000049,1.23e-33,108;CL:0000738,4.51e-26,136;CL:0000767,1.07e-24,3;CL:0002087,6.02e-23,115;CL:0002031,7.24e-22,120;CL:0002032,1.61e-21,161;CL:0000837,1.61e-21,161;CL:0000037,1.75e-20,168;CL:0000988,2.85e-19,177;CL:0000094,1.23e-09,8;CL:0002393,4.56e-09,9;CL:0002397,4.56e-09,9;CL:0000134,7.50e-08,354;CL:0002320,1.26e-07,361;CL:0000034,3.01e-07,441;CL:0000081,3.85e-07,11;CL:0000219,7.82e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.53e-46;42!CL:0000049;6.22e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.48e-46!80;UBERON:0001474!7.01e-43!86;UBERON:0002390!1.68e-40!102;UBERON:0003061!1.68e-40!102;UBERON:0002193!2.70e-36!112;UBERON:0004765!1.39e-35!101;UBERON:0001434!1.39e-35!101;UBERON:0002405!1.78e-30!115;UBERON:0002204!5.87e-19!167;UBERON:0003081!9.32e-17!216;UBERON:0002384!2.89e-13!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.64e-36,76;UBERON:0001474,2.51e-33,82;UBERON:0004765,4.03e-30,90;UBERON:0002405,4.64e-29,93;UBERON:0002390,1.97e-27,98;UBERON:0003061,1.97e-27,98;UBERON:0001434,7.93e-27,100;UBERON:0002193,1.26e-24,108;UBERON:0002204,7.68e-15,167;UBERON:0003081,1.22e-11,203;UBERON:0002384,2.55e-07,371 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,1.53531759238885,1.08371286321253,0,0,0,0,0,0,13.2958898047651,3.81034450193269,4.34021741431704,0,0,0,0,0,0,0.232429036905685,0,0.929119112685311,0.575384784644301,2.0492856522328,5.20260905754887,25.5111803745098,12.2642089880927,9.47985406160392,0.376484679085209,0.818718450173537,0.674170453335254,29.3840536676066,49.1021411426423,40.9175760511386,0,0.199463657621632,0.426224750532694,2.03146467040009,3.40431134814684,1.24564449799115,1.00499466102697,0,2.82345498116652,2.42159801053347,3.68277635987565,7.59509729858123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:115085969..115085982,- | |||
}} |
Revision as of 11:49, 10 September 2013
Short description: | p@chr10:115085969..115085982, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:115085969..115085982, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.77e-69 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.77e-69 | 42 |
defensive cell | 7.37e-60 | 48 |
phagocyte | 7.37e-60 | 48 |
myeloid leukocyte | 7.55e-52 | 72 |
monopoietic cell | 2.77e-47 | 59 |
monocyte | 2.77e-47 | 59 |
monoblast | 2.77e-47 | 59 |
promonocyte | 2.77e-47 | 59 |
macrophage dendritic cell progenitor | 1.17e-45 | 61 |
myeloid lineage restricted progenitor cell | 5.04e-42 | 66 |
granulocyte monocyte progenitor cell | 2.32e-41 | 67 |
myeloid cell | 1.23e-33 | 108 |
common myeloid progenitor | 1.23e-33 | 108 |
leukocyte | 4.51e-26 | 136 |
basophil | 1.07e-24 | 3 |
nongranular leukocyte | 6.02e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 7.24e-22 | 120 |
hematopoietic oligopotent progenitor cell | 1.61e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.61e-21 | 161 |
hematopoietic stem cell | 1.75e-20 | 168 |
hematopoietic cell | 2.85e-19 | 177 |
granulocyte | 1.23e-09 | 8 |
intermediate monocyte | 4.56e-09 | 9 |
CD14-positive, CD16-positive monocyte | 4.56e-09 | 9 |
mesenchymal cell | 7.50e-08 | 354 |
connective tissue cell | 1.26e-07 | 361 |
stem cell | 3.01e-07 | 441 |
blood cell | 3.85e-07 | 11 |
motile cell | 7.82e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.64e-36 | 76 |
bone element | 2.51e-33 | 82 |
skeletal element | 4.03e-30 | 90 |
immune system | 4.64e-29 | 93 |
hematopoietic system | 1.97e-27 | 98 |
blood island | 1.97e-27 | 98 |
skeletal system | 7.93e-27 | 100 |
hemolymphoid system | 1.26e-24 | 108 |
musculoskeletal system | 7.68e-15 | 167 |
lateral plate mesoderm | 1.22e-11 | 203 |
connective tissue | 2.55e-07 | 371 |
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