FFCP PHASE1:Hg19::chr10:112403631..112403640,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C56|description=CAGE_peak_at_chr10:112403631..112403640,+|id=chr10:112403631..112403640,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0004140;1.46e-50;1!UBERON:0005062;1.13e-13;4!UBERON:0007284;1.13e-13;4!UBERON:0004872;1.89e-08;7|ontology_enrichment_disease=DOID:114!7.77e-11!2|ontology_enrichment_disease_v019=DOID:114;7.14e-26;2!DOID:1287;1.13e-13;4|ontology_enrichment_disease_v019_2=DOID:114,7.14e-26,2;DOID:1287,1.13e-13,4|ontology_enrichment_uberon=UBERON:0001905!6.10e-11!2;UBERON:0002757!6.10e-11!2;UBERON:0010134!6.10e-11!2;UBERON:0002784!6.10e-11!2;UBERON:0005408!6.10e-11!2;UBERON:0001899!6.10e-11!2;UBERON:0000369!9.52e-11!4;UBERON:0002435!9.52e-11!4;UBERON:0000204!9.52e-11!4;UBERON:0010082!9.52e-11!4;UBERON:0007023!7.44e-09!115;UBERON:0007100!5.10e-08!27;UBERON:0003978!1.52e-07!3;UBERON:0009751!1.52e-07!3;UBERON:0000946!1.52e-07!3;UBERON:0002523!1.52e-07!3;UBERON:0005983!1.52e-07!3;UBERON:0002165!1.52e-07!3;UBERON:0002062!1.52e-07!3;UBERON:0007280!1.52e-07!3;UBERON:0004151!1.62e-07!3;UBERON:0005383!6.93e-07!3;UBERON:0005382!6.93e-07!3|ontology_enrichment_uberon_v019=UBERON:0002146;3.99e-50;1!UBERON:0005623;3.99e-50;1!UBERON:0001905;7.14e-26;2!UBERON:0002757;7.14e-26;2!UBERON:0010134;7.14e-26;2!UBERON:0005408;7.14e-26;2!UBERON:0001899;7.14e-26;2!UBERON:0007100;1.09e-18;25!UBERON:0003978;9.45e-18;3!UBERON:0000946;9.45e-18;3!UBERON:0003296;1.13e-13;4!UBERON:0010133;1.13e-13;4!UBERON:0002784;1.13e-13;4!UBERON:0000948;4.33e-10;22!UBERON:0001894;2.18e-08;7!UBERON:0003103;7.89e-08;61|ontology_enrichment_uberon_v019_2=UBERON:0002146,2.42e-50,1;UBERON:0005623,2.42e-50,1;UBERON:0001905,9.18e-26,2;UBERON:0002757,9.18e-26,2;UBERON:0010134,9.18e-26,2;UBERON:0005408,9.18e-26,2;UBERON:0001899,9.18e-26,2;UBERON:0003978,8.00e-18,3;UBERON:0009751,8.00e-18,3;UBERON:0000946,8.00e-18,3;UBERON:0002523,8.00e-18,3;UBERON:0005983,8.00e-18,3;UBERON:0002165,8.00e-18,3;UBERON:0002062,8.00e-18,3;UBERON:0007280,8.00e-18,3;UBERON:0007100,2.09e-17,27;UBERON:0003296,1.29e-13,4;UBERON:0010133,1.29e-13,4;UBERON:0002784,1.29e-13,4;UBERON:0000948,2.35e-09,24;UBERON:0005498,2.35e-09,24;UBERON:0004140,2.35e-09,24;UBERON:0009881,2.35e-09,24;UBERON:0004141,2.35e-09,24;UBERON:0003084,2.35e-09,24;UBERON:0007005,2.35e-09,24;UBERON:0004139,2.35e-09,24;UBERON:0004291,2.35e-09,24;UBERON:0004797,2.03e-08,7;UBERON:0001894,2.35e-08,7;UBERON:0006222,2.35e-08,7;UBERON:0003103,1.88e-07,68|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.330037999682352,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687219576995494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,1.60412296808179,0,0.399358000997982,1.28767814440971,0,2.62015542698232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0.968440444553616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0.672567444437648,0,0,0.0887023701626388,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0.22589216407792,0,0.603851374266694,0.0771741581079447,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_at_chr10:112403631..112403640,+ | |||
|id=chr10:112403631..112403640,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.46e-50;1!UBERON:0005062;1.13e-13;4!UBERON:0007284;1.13e-13;4!UBERON:0004872;1.89e-08;7 | |||
|ontology_enrichment_disease=DOID:114!7.77e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:114;7.14e-26;2!DOID:1287;1.13e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.14e-26,2;DOID:1287,1.13e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!6.10e-11!2;UBERON:0002757!6.10e-11!2;UBERON:0010134!6.10e-11!2;UBERON:0002784!6.10e-11!2;UBERON:0005408!6.10e-11!2;UBERON:0001899!6.10e-11!2;UBERON:0000369!9.52e-11!4;UBERON:0002435!9.52e-11!4;UBERON:0000204!9.52e-11!4;UBERON:0010082!9.52e-11!4;UBERON:0007023!7.44e-09!115;UBERON:0007100!5.10e-08!27;UBERON:0003978!1.52e-07!3;UBERON:0009751!1.52e-07!3;UBERON:0000946!1.52e-07!3;UBERON:0002523!1.52e-07!3;UBERON:0005983!1.52e-07!3;UBERON:0002165!1.52e-07!3;UBERON:0002062!1.52e-07!3;UBERON:0007280!1.52e-07!3;UBERON:0004151!1.62e-07!3;UBERON:0005383!6.93e-07!3;UBERON:0005382!6.93e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002146;3.99e-50;1!UBERON:0005623;3.99e-50;1!UBERON:0001905;7.14e-26;2!UBERON:0002757;7.14e-26;2!UBERON:0010134;7.14e-26;2!UBERON:0005408;7.14e-26;2!UBERON:0001899;7.14e-26;2!UBERON:0007100;1.09e-18;25!UBERON:0003978;9.45e-18;3!UBERON:0000946;9.45e-18;3!UBERON:0003296;1.13e-13;4!UBERON:0010133;1.13e-13;4!UBERON:0002784;1.13e-13;4!UBERON:0000948;4.33e-10;22!UBERON:0001894;2.18e-08;7!UBERON:0003103;7.89e-08;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,2.42e-50,1;UBERON:0005623,2.42e-50,1;UBERON:0001905,9.18e-26,2;UBERON:0002757,9.18e-26,2;UBERON:0010134,9.18e-26,2;UBERON:0005408,9.18e-26,2;UBERON:0001899,9.18e-26,2;UBERON:0003978,8.00e-18,3;UBERON:0009751,8.00e-18,3;UBERON:0000946,8.00e-18,3;UBERON:0002523,8.00e-18,3;UBERON:0005983,8.00e-18,3;UBERON:0002165,8.00e-18,3;UBERON:0002062,8.00e-18,3;UBERON:0007280,8.00e-18,3;UBERON:0007100,2.09e-17,27;UBERON:0003296,1.29e-13,4;UBERON:0010133,1.29e-13,4;UBERON:0002784,1.29e-13,4;UBERON:0000948,2.35e-09,24;UBERON:0005498,2.35e-09,24;UBERON:0004140,2.35e-09,24;UBERON:0009881,2.35e-09,24;UBERON:0004141,2.35e-09,24;UBERON:0003084,2.35e-09,24;UBERON:0007005,2.35e-09,24;UBERON:0004139,2.35e-09,24;UBERON:0004291,2.35e-09,24;UBERON:0004797,2.03e-08,7;UBERON:0001894,2.35e-08,7;UBERON:0006222,2.35e-08,7;UBERON:0003103,1.88e-07,68 | |||
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|short_description=p@chr10:112403631..112403640,+ | |||
}} |
Revision as of 11:44, 10 September 2013
Short description: | p@chr10:112403631..112403640, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:112403631..112403640, + |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 2.42e-50 | 1 |
semi-lunar valve | 2.42e-50 | 1 |
pineal body | 9.18e-26 | 2 |
regional part of epithalamus | 9.18e-26 | 2 |
secretory circumventricular organ | 9.18e-26 | 2 |
circumventricular organ | 9.18e-26 | 2 |
epithalamus | 9.18e-26 | 2 |
valve | 8.00e-18 | 3 |
cardiac mesenchyme | 8.00e-18 | 3 |
cardial valve | 8.00e-18 | 3 |
tunica intima | 8.00e-18 | 3 |
heart layer | 8.00e-18 | 3 |
endocardium | 8.00e-18 | 3 |
endocardial cushion | 8.00e-18 | 3 |
presumptive endocardium | 8.00e-18 | 3 |
primary circulatory organ | 2.09e-17 | 27 |
gland of diencephalon | 1.29e-13 | 4 |
neuroendocrine gland | 1.29e-13 | 4 |
regional part of diencephalon | 1.29e-13 | 4 |
heart | 2.35e-09 | 24 |
primitive heart tube | 2.35e-09 | 24 |
primary heart field | 2.35e-09 | 24 |
anterior lateral plate mesoderm | 2.35e-09 | 24 |
heart tube | 2.35e-09 | 24 |
heart primordium | 2.35e-09 | 24 |
cardiac mesoderm | 2.35e-09 | 24 |
cardiogenic plate | 2.35e-09 | 24 |
heart rudiment | 2.35e-09 | 24 |
blood vessel layer | 2.03e-08 | 7 |
diencephalon | 2.35e-08 | 7 |
future diencephalon | 2.35e-08 | 7 |
compound organ | 1.88e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.14e-26 | 2 |
cardiovascular system disease | 1.13e-13 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.