FFCP PHASE1:Hg19::chr17:41150407..41150470,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000548!1.31e-25!679;CL:0000004!1.31e-25!679;CL:0000255!1.31e-25!679;CL:0000012!5.85e-25!682;CL:0002321!1.73e-17!248;CL:0000220!2.13e-17!246;CL:0000144!1.32e-15!625;CL:0000003!2.28e-14!722;CL:0000055!1.12e-13!180;CL:0000393!2.35e-13!60;CL:0000211!2.35e-13!60;CL:0000183!6.06e-13!59;CL:0000187!2.76e-12!54;CL:0000680!3.24e-12!57;CL:0000056!3.24e-12!57;CL:0000355!3.24e-12!57;CL:0002371!6.38e-12!591;CL:0000222!1.78e-11!119;CL:0000192!1.09e-09!42;CL:0000514!1.09e-09!42;CL:0000066!1.12e-09!254 | |ontology_enrichment_celltype=CL:0000548!1.31e-25!679;CL:0000004!1.31e-25!679;CL:0000255!1.31e-25!679;CL:0000012!5.85e-25!682;CL:0002321!1.73e-17!248;CL:0000220!2.13e-17!246;CL:0000144!1.32e-15!625;CL:0000003!2.28e-14!722;CL:0000055!1.12e-13!180;CL:0000393!2.35e-13!60;CL:0000211!2.35e-13!60;CL:0000183!6.06e-13!59;CL:0000187!2.76e-12!54;CL:0000680!3.24e-12!57;CL:0000056!3.24e-12!57;CL:0000355!3.24e-12!57;CL:0002371!6.38e-12!591;CL:0000222!1.78e-11!119;CL:0000192!1.09e-09!42;CL:0000514!1.09e-09!42;CL:0000066!1.12e-09!254 | ||
|ontology_enrichment_celltype_v019=CL:0000187;1.55e-07;55 | |ontology_enrichment_celltype_v019=CL:0000187;1.55e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.66e-17,250;CL:0000393,5.42e-13,61;CL:0000211,5.42e-13,61;CL:0000187,6.40e-12,55;CL:0000680,7.25e-12,58;CL:0000056,7.25e-12,58;CL:0000355,7.25e-12,58;CL:0000222,1.95e-11,121;CL:0000066,8.78e-10,253;CL:0000192,2.48e-09,43;CL:0000514,2.48e-09,43 | |||
|ontology_enrichment_development_v019=CL:0000355;8.79e-07;58 | |ontology_enrichment_development_v019=CL:0000355;8.79e-07;58 | ||
|ontology_enrichment_disease=DOID:14566!1.56e-12!239;DOID:162!3.11e-12!235 | |ontology_enrichment_disease=DOID:14566!1.56e-12!239;DOID:162!3.11e-12!235 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:14566,1.56e-12,239;DOID:162,3.11e-12,235 | |||
|ontology_enrichment_uberon=UBERON:0000486!4.12e-15!82;UBERON:0004290!4.81e-15!70;UBERON:0003104!1.54e-14!238;UBERON:0009142!1.54e-14!238;UBERON:0000914!1.85e-14!83;UBERON:0002329!1.85e-14!83;UBERON:0003077!1.85e-14!83;UBERON:0003059!1.85e-14!83;UBERON:0007282!1.85e-14!83;UBERON:0009618!1.85e-14!83;UBERON:0007285!1.85e-14!83;UBERON:0001134!3.66e-12!61;UBERON:0002036!3.66e-12!61;UBERON:0003082!3.66e-12!61;UBERON:0002100!7.47e-12!216;UBERON:0005256!1.02e-11!143;UBERON:0002385!5.96e-11!63;UBERON:0001015!5.96e-11!63;UBERON:0000383!5.96e-11!63;UBERON:0000490!1.49e-10!138;UBERON:0003914!1.44e-07!118 | |ontology_enrichment_uberon=UBERON:0000486!4.12e-15!82;UBERON:0004290!4.81e-15!70;UBERON:0003104!1.54e-14!238;UBERON:0009142!1.54e-14!238;UBERON:0000914!1.85e-14!83;UBERON:0002329!1.85e-14!83;UBERON:0003077!1.85e-14!83;UBERON:0003059!1.85e-14!83;UBERON:0007282!1.85e-14!83;UBERON:0009618!1.85e-14!83;UBERON:0007285!1.85e-14!83;UBERON:0001134!3.66e-12!61;UBERON:0002036!3.66e-12!61;UBERON:0003082!3.66e-12!61;UBERON:0002100!7.47e-12!216;UBERON:0005256!1.02e-11!143;UBERON:0002385!5.96e-11!63;UBERON:0001015!5.96e-11!63;UBERON:0000383!5.96e-11!63;UBERON:0000490!1.49e-10!138;UBERON:0003914!1.44e-07!118 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.16e-15,78;UBERON:0000486,8.57e-15,83;UBERON:0002329,1.09e-14,71;UBERON:0003059,1.09e-14,71;UBERON:0007282,1.09e-14,71;UBERON:0004290,1.09e-14,71;UBERON:0009618,1.09e-14,71;UBERON:0007524,2.83e-14,73;UBERON:0003077,6.27e-14,72;UBERON:0007285,6.27e-14,72;UBERON:0000490,1.01e-12,148;UBERON:0002100,3.36e-12,199;UBERON:0001134,7.84e-12,62;UBERON:0002036,7.84e-12,62;UBERON:0003082,7.84e-12,62;UBERON:0002385,1.18e-10,64;UBERON:0001015,1.18e-10,64;UBERON:0000383,1.18e-10,64;UBERON:0005256,1.25e-10,122;UBERON:0003104,1.95e-10,160;UBERON:0009142,1.95e-10,160;UBERON:0003914,1.03e-07,117 | |||
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4382,75.6789463902259,223.756807627657 | ||
|short_description=p1@RPL27 | |short_description=p1@RPL27 | ||
}} | }} |
Revision as of 06:38, 21 November 2012
Short description: | p1@RPL27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RPL27_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000253788, NM_000988, uc002icj.2_5end |
EntrezGene: | RPL27 |
HGNC: | 10328 |
UniProt: | P61353 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.66e-17 | 250 |
electrically responsive cell | 5.42e-13 | 61 |
electrically active cell | 5.42e-13 | 61 |
muscle cell | 6.40e-12 | 55 |
muscle precursor cell | 7.25e-12 | 58 |
myoblast | 7.25e-12 | 58 |
multi-potent skeletal muscle stem cell | 7.25e-12 | 58 |
mesodermal cell | 1.95e-11 | 121 |
epithelial cell | 8.78e-10 | 253 |
smooth muscle cell | 2.48e-09 | 43 |
smooth muscle myoblast | 2.48e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.16e-15 | 78 |
multilaminar epithelium | 8.57e-15 | 83 |
somite | 1.09e-14 | 71 |
presomitic mesoderm | 1.09e-14 | 71 |
presumptive segmental plate | 1.09e-14 | 71 |
dermomyotome | 1.09e-14 | 71 |
trunk paraxial mesoderm | 1.09e-14 | 71 |
dense mesenchyme tissue | 2.83e-14 | 73 |
paraxial mesoderm | 6.27e-14 | 72 |
presumptive paraxial mesoderm | 6.27e-14 | 72 |
unilaminar epithelium | 1.01e-12 | 148 |
trunk | 3.36e-12 | 199 |
skeletal muscle tissue | 7.84e-12 | 62 |
striated muscle tissue | 7.84e-12 | 62 |
myotome | 7.84e-12 | 62 |
muscle tissue | 1.18e-10 | 64 |
musculature | 1.18e-10 | 64 |
musculature of body | 1.18e-10 | 64 |
trunk mesenchyme | 1.25e-10 | 122 |
mesenchyme | 1.95e-10 | 160 |
entire embryonic mesenchyme | 1.95e-10 | 160 |
epithelial tube | 1.03e-07 | 117 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.56e-12 | 239 |
cancer | 3.11e-12 | 235 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.