FFCP PHASE1:Hg19::chr1:218615509..218615516,+: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000064;3.37e-14;3!CL:0000067;3.37e-14;3!CL:0005012;3.37e-14;3!CL:0002304;3.37e-14;3!CL:0000075;3.33e-11;27!CL:0000306;2.47e-10;4!CL:0002222;2.47e-10;4!CL:0002224;2.47e-10;4!CL:0000710;4.57e-07;20 | |ontology_enrichment_celltype_v019=CL:0000064;3.37e-14;3!CL:0000067;3.37e-14;3!CL:0005012;3.37e-14;3!CL:0002304;3.37e-14;3!CL:0000075;3.33e-11;27!CL:0000306;2.47e-10;4!CL:0002222;2.47e-10;4!CL:0002224;2.47e-10;4!CL:0000710;4.57e-07;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.86e-14,3;CL:0000067,2.86e-14,3;CL:0005012,2.86e-14,3;CL:0002304,2.86e-14,3;CL:0000075,4.17e-11,27;CL:0000306,2.52e-10,4;CL:0002222,2.52e-10,4;CL:0002224,2.52e-10,4;CL:0000710,5.53e-07,20 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.35e-14!123;UBERON:0000153!3.52e-13!129;UBERON:0007811!3.52e-13!129;UBERON:0000481!3.76e-12!347;UBERON:0000119!6.67e-12!312;UBERON:0000483!4.04e-11!309;UBERON:0000477!4.82e-10!286;UBERON:0000475!8.68e-10!365;UBERON:0004111!5.17e-09!241;UBERON:0000924!1.60e-08!173;UBERON:0006601!1.60e-08!173;UBERON:0002346!1.94e-08!90;UBERON:0004121!2.07e-08!169;UBERON:0003075!2.09e-08!86;UBERON:0007284!2.09e-08!86;UBERON:0000955!1.58e-07!69;UBERON:0006238!1.58e-07!69;UBERON:0003056!2.21e-07!61;UBERON:0007625!4.02e-07!11;UBERON:0002616!6.87e-07!59 | |ontology_enrichment_uberon=UBERON:0000033!2.35e-14!123;UBERON:0000153!3.52e-13!129;UBERON:0007811!3.52e-13!129;UBERON:0000481!3.76e-12!347;UBERON:0000119!6.67e-12!312;UBERON:0000483!4.04e-11!309;UBERON:0000477!4.82e-10!286;UBERON:0000475!8.68e-10!365;UBERON:0004111!5.17e-09!241;UBERON:0000924!1.60e-08!173;UBERON:0006601!1.60e-08!173;UBERON:0002346!1.94e-08!90;UBERON:0004121!2.07e-08!169;UBERON:0003075!2.09e-08!86;UBERON:0007284!2.09e-08!86;UBERON:0000955!1.58e-07!69;UBERON:0006238!1.58e-07!69;UBERON:0003056!2.21e-07!61;UBERON:0007625!4.02e-07!11;UBERON:0002616!6.87e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;9.19e-19;11!UBERON:0000488;3.36e-18;4!UBERON:0001801;1.61e-14;14!UBERON:0001778;3.37e-14;3!UBERON:0001775;3.37e-14;3!UBERON:0002203;3.74e-12;6!UBERON:0001768;3.74e-12;6!UBERON:0002200;3.74e-12;6!UBERON:0000020;7.87e-11;23!UBERON:0000019;2.01e-10;19!UBERON:0000047;2.01e-10;19!UBERON:0004088;2.01e-10;19!UBERON:0010230;2.01e-10;19!UBERON:0010077;2.47e-10;4!UBERON:0005389;2.47e-10;4!UBERON:0000484;2.47e-10;4!UBERON:0000965;2.47e-10;4!UBERON:0001803;2.47e-10;4!UBERON:0001032;2.53e-10;24!UBERON:0004456;2.53e-10;24!UBERON:0006876;6.51e-10;11!UBERON:0000970;7.52e-10;20!UBERON:0010371;1.01e-09;31!UBERON:0002104;2.48e-09;21!UBERON:0001456;2.48e-09;21!UBERON:0000058;5.98e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0007625;9.19e-19;11!UBERON:0000488;3.36e-18;4!UBERON:0001801;1.61e-14;14!UBERON:0001778;3.37e-14;3!UBERON:0001775;3.37e-14;3!UBERON:0002203;3.74e-12;6!UBERON:0001768;3.74e-12;6!UBERON:0002200;3.74e-12;6!UBERON:0000020;7.87e-11;23!UBERON:0000019;2.01e-10;19!UBERON:0000047;2.01e-10;19!UBERON:0004088;2.01e-10;19!UBERON:0010230;2.01e-10;19!UBERON:0010077;2.47e-10;4!UBERON:0005389;2.47e-10;4!UBERON:0000484;2.47e-10;4!UBERON:0000965;2.47e-10;4!UBERON:0001803;2.47e-10;4!UBERON:0001032;2.53e-10;24!UBERON:0004456;2.53e-10;24!UBERON:0006876;6.51e-10;11!UBERON:0000970;7.52e-10;20!UBERON:0010371;1.01e-09;31!UBERON:0002104;2.48e-09;21!UBERON:0001456;2.48e-09;21!UBERON:0000058;5.98e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,8.03e-19,11;UBERON:0000488,2.62e-18,4;UBERON:0001801,1.45e-14,14;UBERON:0001778,2.86e-14,3;UBERON:0001775,2.86e-14,3;UBERON:0002203,3.18e-12,6;UBERON:0001768,3.18e-12,6;UBERON:0002200,3.18e-12,6;UBERON:0010077,2.52e-10,4;UBERON:0005389,2.52e-10,4;UBERON:0000484,2.52e-10,4;UBERON:0002546,2.52e-10,4;UBERON:0000965,2.52e-10,4;UBERON:0001803,2.52e-10,4;UBERON:0003073,2.52e-10,4;UBERON:0005426,2.52e-10,4;UBERON:0000020,2.86e-10,24;UBERON:0001032,2.86e-10,24;UBERON:0004456,2.86e-10,24;UBERON:0006876,5.53e-10,11;UBERON:0000019,7.00e-10,20;UBERON:0000047,7.00e-10,20;UBERON:0010312,7.00e-10,20;UBERON:0004088,7.00e-10,20;UBERON:0010230,7.00e-10,20;UBERON:0003072,7.00e-10,20;UBERON:0004128,7.00e-10,20;UBERON:0003071,7.00e-10,20;UBERON:0000970,2.32e-09,21;UBERON:0002104,2.32e-09,21;UBERON:0001456,6.89e-09,22;UBERON:0005085,7.85e-08,31;UBERON:0000490,1.54e-07,148 | |||
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| ||
|short_description=p13@TGFB2 | |short_description=p13@TGFB2 | ||
}} | }} |
Revision as of 02:04, 21 November 2012
Short description: | p13@TGFB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_TGFB2_5end |
Coexpression cluster: | C3939_Lens_Ciliary_anaplastic_mesothelioma_osteoclastoma_pharyngeal_Fibroblast |
Association with transcript: | -451bp_to_AK021874_5end |
EntrezGene: | TGFB2 |
HGNC: | 11768 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.86e-14 | 3 |
ciliated epithelial cell | 2.86e-14 | 3 |
multi-ciliated epithelial cell | 2.86e-14 | 3 |
non-pigmented ciliary epithelial cell | 2.86e-14 | 3 |
columnar/cuboidal epithelial cell | 4.17e-11 | 27 |
crystallin accumulating cell | 2.52e-10 | 4 |
vertebrate lens cell | 2.52e-10 | 4 |
lens epithelial cell | 2.52e-10 | 4 |
neurecto-epithelial cell | 5.53e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 8.03e-19 | 11 |
atypical epithelium | 2.62e-18 | 4 |
anterior segment of eyeball | 1.45e-14 | 14 |
ciliary epithelium | 2.86e-14 | 3 |
ciliary body | 2.86e-14 | 3 |
vasculature of eye | 3.18e-12 | 6 |
uvea | 3.18e-12 | 6 |
vasculature of head | 3.18e-12 | 6 |
cuboidal epithelium | 2.52e-10 | 4 |
transparent eye structure | 2.52e-10 | 4 |
simple cuboidal epithelium | 2.52e-10 | 4 |
cranial placode | 2.52e-10 | 4 |
lens of camera-type eye | 2.52e-10 | 4 |
epithelium of lens | 2.52e-10 | 4 |
lens placode | 2.52e-10 | 4 |
lens vesicle | 2.52e-10 | 4 |
sense organ | 2.86e-10 | 24 |
sensory system | 2.86e-10 | 24 |
entire sense organ system | 2.86e-10 | 24 |
vasculature of organ | 5.53e-10 | 11 |
camera-type eye | 7.00e-10 | 20 |
simple eye | 7.00e-10 | 20 |
immature eye | 7.00e-10 | 20 |
ocular region | 7.00e-10 | 20 |
eyeball of camera-type eye | 7.00e-10 | 20 |
optic cup | 7.00e-10 | 20 |
optic vesicle | 7.00e-10 | 20 |
eye primordium | 7.00e-10 | 20 |
eye | 2.32e-09 | 21 |
visual system | 2.32e-09 | 21 |
face | 6.89e-09 | 22 |
ectodermal placode | 7.85e-08 | 31 |
unilaminar epithelium | 1.54e-07 | 148 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.