FFCP PHASE1:Hg19::chr6:18208375..18208387,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002553;1.48e-40;1!CL:0002535;3.81e-21;2!CL:0000082;2.36e-09;19 | |ontology_enrichment_celltype_v019=CL:0002553;1.48e-40;1!CL:0002535;3.81e-21;2!CL:0000082;2.36e-09;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.48e-40,1;CL:0002535,3.81e-21,2;CL:0000082,2.36e-09,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:5409!2.41e-11!4 | |ontology_enrichment_disease=DOID:5409!2.41e-11!4 | ||
|ontology_enrichment_disease_v019=DOID:4362;1.99e-32;5!DOID:1324;1.42e-11;15!DOID:5409;3.42e-11;4!DOID:0050615;6.45e-11;16!DOID:1325;6.04e-07;7!DOID:3904;6.04e-07;7!DOID:120;7.24e-07;27 | |ontology_enrichment_disease_v019=DOID:4362;1.99e-32;5!DOID:1324;1.42e-11;15!DOID:5409;3.42e-11;4!DOID:0050615;6.45e-11;16!DOID:1325;6.04e-07;7!DOID:3904;6.04e-07;7!DOID:120;7.24e-07;27 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,1.99e-32,5;DOID:1324,1.42e-11,15;DOID:5409,3.42e-11,4;DOID:0050615,6.45e-11,16;DOID:0050686,8.63e-08,137;DOID:1325,6.04e-07,7;DOID:3904,6.04e-07,7;DOID:120,7.24e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.81e-16!57;UBERON:0005068!3.81e-16!57;UBERON:0006241!3.81e-16!57;UBERON:0007135!3.81e-16!57;UBERON:0002616!1.73e-15!59;UBERON:0002780!2.62e-15!41;UBERON:0001890!2.62e-15!41;UBERON:0006240!2.62e-15!41;UBERON:0003080!6.89e-15!42;UBERON:0000955!2.59e-14!69;UBERON:0006238!2.59e-14!69;UBERON:0002619!3.33e-14!22;UBERON:0003075!1.33e-12!86;UBERON:0007284!1.33e-12!86;UBERON:0001950!2.13e-12!20;UBERON:0000956!2.18e-12!25;UBERON:0000203!2.18e-12!25;UBERON:0000200!6.15e-12!6;UBERON:0002346!7.11e-12!90;UBERON:0001869!1.26e-11!32;UBERON:0001017!1.61e-11!82;UBERON:0007023!5.55e-11!115;UBERON:0001893!7.40e-11!34;UBERON:0005743!7.90e-11!86;UBERON:0003056!1.67e-09!61;UBERON:0000073!1.74e-09!94;UBERON:0001016!1.74e-09!94;UBERON:0001871!3.74e-09!7;UBERON:0002791!4.08e-09!33;UBERON:0002020!8.21e-09!34;UBERON:0003528!8.21e-09!34;UBERON:0000033!1.45e-07!123;UBERON:0000153!4.77e-07!129;UBERON:0007811!4.77e-07!129;UBERON:0002771!5.78e-07!3;UBERON:0001896!6.93e-07!3;UBERON:0005290!6.93e-07!3;UBERON:0010096!6.93e-07!3;UBERON:0004121!8.68e-07!169 | |ontology_enrichment_uberon=UBERON:0001049!3.81e-16!57;UBERON:0005068!3.81e-16!57;UBERON:0006241!3.81e-16!57;UBERON:0007135!3.81e-16!57;UBERON:0002616!1.73e-15!59;UBERON:0002780!2.62e-15!41;UBERON:0001890!2.62e-15!41;UBERON:0006240!2.62e-15!41;UBERON:0003080!6.89e-15!42;UBERON:0000955!2.59e-14!69;UBERON:0006238!2.59e-14!69;UBERON:0002619!3.33e-14!22;UBERON:0003075!1.33e-12!86;UBERON:0007284!1.33e-12!86;UBERON:0001950!2.13e-12!20;UBERON:0000956!2.18e-12!25;UBERON:0000203!2.18e-12!25;UBERON:0000200!6.15e-12!6;UBERON:0002346!7.11e-12!90;UBERON:0001869!1.26e-11!32;UBERON:0001017!1.61e-11!82;UBERON:0007023!5.55e-11!115;UBERON:0001893!7.40e-11!34;UBERON:0005743!7.90e-11!86;UBERON:0003056!1.67e-09!61;UBERON:0000073!1.74e-09!94;UBERON:0001016!1.74e-09!94;UBERON:0001871!3.74e-09!7;UBERON:0002791!4.08e-09!33;UBERON:0002020!8.21e-09!34;UBERON:0003528!8.21e-09!34;UBERON:0000033!1.45e-07!123;UBERON:0000153!4.77e-07!129;UBERON:0007811!4.77e-07!129;UBERON:0002771!5.78e-07!3;UBERON:0001896!6.93e-07!3;UBERON:0005290!6.93e-07!3;UBERON:0010096!6.93e-07!3;UBERON:0004121!8.68e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000002;3.11e-27;6!UBERON:0001560;3.11e-27;6!UBERON:0006955;3.81e-21;2!UBERON:0004801;3.81e-21;2!UBERON:0000995;2.46e-10;17!UBERON:0003975;8.11e-10;18!UBERON:0004802;2.36e-09;19!UBERON:0000115;2.36e-09;19!UBERON:0004175;1.48e-08;21!UBERON:0002048;3.27e-08;22!UBERON:0004807;3.27e-08;22!UBERON:0000117;3.27e-08;22!UBERON:0000171;3.27e-08;22!UBERON:0000170;3.27e-08;22 | |ontology_enrichment_uberon_v019=UBERON:0000002;3.11e-27;6!UBERON:0001560;3.11e-27;6!UBERON:0006955;3.81e-21;2!UBERON:0004801;3.81e-21;2!UBERON:0000995;2.46e-10;17!UBERON:0003975;8.11e-10;18!UBERON:0004802;2.36e-09;19!UBERON:0000115;2.36e-09;19!UBERON:0004175;1.48e-08;21!UBERON:0002048;3.27e-08;22!UBERON:0004807;3.27e-08;22!UBERON:0000117;3.27e-08;22!UBERON:0000171;3.27e-08;22!UBERON:0000170;3.27e-08;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,3.11e-27,6;UBERON:0001560,3.11e-27,6;UBERON:0006955,3.81e-21,2;UBERON:0004801,3.81e-21,2;UBERON:0004802,2.36e-09,19;UBERON:0000115,2.36e-09,19;UBERON:0000995,1.48e-08,21;UBERON:0002048,3.27e-08,22;UBERON:0005795,3.27e-08,22;UBERON:0003975,3.27e-08,22;UBERON:0000117,3.27e-08,22;UBERON:0000171,3.27e-08,22;UBERON:0000170,3.27e-08,22;UBERON:0005597,3.27e-08,22;UBERON:0000118,3.27e-08,22;UBERON:0004175,2.43e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,6.2983186963569,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60399523799829,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63757624423474,0,0.118920090777569,0,0.329821550236287,2.56636834063345,0,0,7.52507674178437,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,6.2983186963569,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60399523799829,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63757624423474,0,0.118920090777569,0,0.329821550236287,2.56636834063345,0,0,7.52507674178437,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr6:18208375..18208387,+ | |short_description=p@chr6:18208375..18208387,+ | ||
}} | }} |
Revision as of 01:37, 21 November 2012
Short description: | p@chr6:18208375..18208387, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:18208375..18208387, + |
Coexpression cluster: | C1119_nonsmall_smallcell_argyrophil_small_duodenum_esophagus_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.48e-40 | 1 |
epithelial cell of cervix | 3.81e-21 | 2 |
epithelial cell of lung | 2.36e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 3.11e-27 | 6 |
neck of organ | 3.11e-27 | 6 |
uterine epithelium | 3.81e-21 | 2 |
cervix epithelium | 3.81e-21 | 2 |
respiratory tract epithelium | 2.36e-09 | 19 |
lung epithelium | 2.36e-09 | 19 |
uterus | 1.48e-08 | 21 |
lung | 3.27e-08 | 22 |
embryonic uterus | 3.27e-08 | 22 |
internal female genitalia | 3.27e-08 | 22 |
respiratory tube | 3.27e-08 | 22 |
respiration organ | 3.27e-08 | 22 |
pair of lungs | 3.27e-08 | 22 |
lung primordium | 3.27e-08 | 22 |
lung bud | 3.27e-08 | 22 |
internal genitalia | 2.43e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.99e-32 | 5 |
lung cancer | 1.42e-11 | 15 |
lung small cell carcinoma | 3.42e-11 | 4 |
respiratory system cancer | 6.45e-11 | 16 |
organ system cancer | 8.63e-08 | 137 |
bronchus cancer | 6.04e-07 | 7 |
bronchogenic carcinoma | 6.04e-07 | 7 |
female reproductive organ cancer | 7.24e-07 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.