FFCP PHASE1:Hg19::chrX:13309441..13309454,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002541!2.56e-15!3;CL:0000054!7.20e-07!2;CL:0000137!7.20e-07!2;CL:0000092!7.20e-07!2 | |ontology_enrichment_celltype=CL:0002541!2.56e-15!3;CL:0000054!7.20e-07!2;CL:0000137!7.20e-07!2;CL:0000092!7.20e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000054;2.99e-10;2!CL:0000137;2.99e-10;2!CL:0000092;2.99e-10;2 | |ontology_enrichment_celltype_v019=CL:0000054;2.99e-10;2!CL:0000137;2.99e-10;2!CL:0000092;2.99e-10;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000054,2.99e-10,2;CL:0000137,2.99e-10,2;CL:0000092,2.99e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.62e-19;1 | |ontology_enrichment_development_v019=UBERON:0003124;5.62e-19;1 | ||
|ontology_enrichment_disease=DOID:1036!9.38e-23!8;DOID:0060085!1.75e-12!1;DOID:3165!1.75e-12!1;DOID:0060121!1.75e-12!1;DOID:2438!1.75e-12!1;DOID:4418!1.75e-12!1;DOID:8692!5.96e-09!31;DOID:2531!1.63e-07!51;DOID:0060083!1.63e-07!51;DOID:1240!4.36e-07!39;DOID:200!7.20e-07!2;DOID:4305!7.20e-07!2 | |ontology_enrichment_disease=DOID:1036!9.38e-23!8;DOID:0060085!1.75e-12!1;DOID:3165!1.75e-12!1;DOID:0060121!1.75e-12!1;DOID:2438!1.75e-12!1;DOID:4418!1.75e-12!1;DOID:8692!5.96e-09!31;DOID:2531!1.63e-07!51;DOID:0060083!1.63e-07!51;DOID:1240!4.36e-07!39;DOID:200!7.20e-07!2;DOID:4305!7.20e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1036;2.70e-36;8!DOID:0060085;3.91e-19;1!DOID:3165;3.91e-19;1!DOID:0060121;3.91e-19;1!DOID:2438;3.91e-19;1!DOID:4418;3.91e-19;1!DOID:200;2.99e-10;2!DOID:4305;2.99e-10;2!DOID:8692;5.53e-10;31!DOID:2531;3.25e-08;51!DOID:0060083;3.25e-08;51!DOID:1240;4.04e-08;39 | |ontology_enrichment_disease_v019=DOID:1036;2.70e-36;8!DOID:0060085;3.91e-19;1!DOID:3165;3.91e-19;1!DOID:0060121;3.91e-19;1!DOID:2438;3.91e-19;1!DOID:4418;3.91e-19;1!DOID:200;2.99e-10;2!DOID:4305;2.99e-10;2!DOID:8692;5.53e-10;31!DOID:2531;3.25e-08;51!DOID:0060083;3.25e-08;51!DOID:1240;4.04e-08;39 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,2.83e-36,8;DOID:0060085,3.91e-19,1;DOID:3165,3.91e-19,1;DOID:0060121,3.91e-19,1;DOID:2438,3.91e-19,1;DOID:4418,3.91e-19,1;DOID:200,2.99e-10,2;DOID:4305,2.99e-10,2;DOID:8692,1.15e-09,31;DOID:2531,6.49e-09,51;DOID:0060083,6.49e-09,51;DOID:1240,9.65e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0000476!2.56e-15!3;UBERON:0000920!2.56e-15!3;UBERON:0003124!1.49e-14!7;UBERON:0001282!7.03e-13!1;UBERON:0009842!7.03e-13!1;UBERON:0003704!7.03e-13!1;UBERON:0001171!7.03e-13!1;UBERON:0001172!7.03e-13!1;UBERON:0005631!1.50e-07!14;UBERON:0000158!1.50e-07!14 | |ontology_enrichment_uberon=UBERON:0000476!2.56e-15!3;UBERON:0000920!2.56e-15!3;UBERON:0003124!1.49e-14!7;UBERON:0001282!7.03e-13!1;UBERON:0009842!7.03e-13!1;UBERON:0003704!7.03e-13!1;UBERON:0001171!7.03e-13!1;UBERON:0001172!7.03e-13!1;UBERON:0005631!1.50e-07!14;UBERON:0000158!1.50e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;8.95e-20;1!UBERON:0009842;8.95e-20;1!UBERON:0003704;8.95e-20;1!UBERON:0001171;8.95e-20;1!UBERON:0001172;8.95e-20;1!UBERON:0001280;1.82e-07;3!UBERON:0004647;1.82e-07;3!UBERON:0002369;2.19e-07;3!UBERON:0001235;2.19e-07;3!UBERON:0006858;2.19e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001282;8.95e-20;1!UBERON:0009842;8.95e-20;1!UBERON:0003704;8.95e-20;1!UBERON:0001171;8.95e-20;1!UBERON:0001172;8.95e-20;1!UBERON:0001280;1.82e-07;3!UBERON:0004647;1.82e-07;3!UBERON:0002369;2.19e-07;3!UBERON:0001235;2.19e-07;3!UBERON:0006858;2.19e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,8.95e-20,1;UBERON:0009842,8.95e-20,1;UBERON:0003704,8.95e-20,1;UBERON:0001171,8.95e-20,1;UBERON:0001172,8.95e-20,1;UBERON:0001280,1.82e-07,3;UBERON:0004647,1.82e-07,3;UBERON:0005171,1.82e-07,3;UBERON:0002369,2.19e-07,3;UBERON:0001235,2.19e-07,3;UBERON:0006858,2.19e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,8.37387600071643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4451625899461,4.15015027898508,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,3.15833924864053,4.90156335794349,5.87375554415449,10.246701567106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37814839895082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92717821536708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5352488054242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.833565680400634,3.7514978221865,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,8.37387600071643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4451625899461,4.15015027898508,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,3.15833924864053,4.90156335794349,5.87375554415449,10.246701567106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37814839895082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92717821536708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5352488054242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.833565680400634,3.7514978221865,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chrX:13309441..13309454,+ | |short_description=p@chrX:13309441..13309454,+ | ||
}} | }} |
Revision as of 23:19, 20 November 2012
Short description: | p@chrX:13309441..13309454, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:13309441..13309454, + |
Coexpression cluster: | C4051_small_chronic_adrenal_testis_cholangiocellular_epidermoid_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 2.99e-10 | 2 |
osteocyte | 2.99e-10 | 2 |
osteoclast | 2.99e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 8.95e-20 | 1 |
acinus | 8.95e-20 | 1 |
intrahepatic bile duct | 8.95e-20 | 1 |
portal lobule | 8.95e-20 | 1 |
hepatic acinus | 8.95e-20 | 1 |
liver parenchyma | 1.82e-07 | 3 |
liver lobule | 1.82e-07 | 3 |
hepatic duct | 1.82e-07 | 3 |
adrenal gland | 2.19e-07 | 3 |
adrenal cortex | 2.19e-07 | 3 |
adrenal/interrenal gland | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.83e-36 | 8 |
organ system benign neoplasm | 3.91e-19 | 1 |
skin benign neoplasm | 3.91e-19 | 1 |
integumentary system benign neoplasm | 3.91e-19 | 1 |
dermis tumor | 3.91e-19 | 1 |
cutaneous fibrous histiocytoma | 3.91e-19 | 1 |
giant cell tumor | 2.99e-10 | 2 |
bone giant cell tumor | 2.99e-10 | 2 |
myeloid leukemia | 1.15e-09 | 31 |
hematologic cancer | 6.49e-09 | 51 |
immune system cancer | 6.49e-09 | 51 |
leukemia | 9.65e-08 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.