FFCP PHASE1:Hg19::chr1:32716857..32716889,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000738!1.21e-48!140;CL:0002087!2.00e-42!119;CL:0000037!3.67e-40!172;CL:0000566!3.67e-40!172;CL:0002031!4.88e-38!124;CL:0002032!1.00e-35!165;CL:0000837!1.00e-35!165;CL:0000988!1.31e-35!182;CL:0000542!1.48e-33!53;CL:0000051!1.48e-33!53;CL:0000838!3.83e-33!52;CL:0000084!1.02e-19!25;CL:0000827!1.02e-19!25;CL:0000791!3.14e-18!18;CL:0000789!3.14e-18!18;CL:0002420!3.14e-18!18;CL:0002419!3.14e-18!18;CL:0000790!3.14e-18!18;CL:0002057!1.32e-12!42;CL:0000945!2.60e-12!24;CL:0000826!2.60e-12!24;CL:0000766!3.78e-12!76;CL:0000625!6.34e-12!11;CL:0000860!4.81e-11!45;CL:0002009!5.14e-11!65;CL:0000557!7.17e-11!71;CL:0002194!2.16e-10!63;CL:0000576!2.16e-10!63;CL:0000040!2.16e-10!63;CL:0000559!2.16e-10!63;CL:0000236!2.30e-10!14;CL:0000763!1.04e-09!112;CL:0000049!1.04e-09!112;CL:0000839!2.71e-09!70;CL:0000624!4.96e-07!6 | |ontology_enrichment_celltype=CL:0000738!1.21e-48!140;CL:0002087!2.00e-42!119;CL:0000037!3.67e-40!172;CL:0000566!3.67e-40!172;CL:0002031!4.88e-38!124;CL:0002032!1.00e-35!165;CL:0000837!1.00e-35!165;CL:0000988!1.31e-35!182;CL:0000542!1.48e-33!53;CL:0000051!1.48e-33!53;CL:0000838!3.83e-33!52;CL:0000084!1.02e-19!25;CL:0000827!1.02e-19!25;CL:0000791!3.14e-18!18;CL:0000789!3.14e-18!18;CL:0002420!3.14e-18!18;CL:0002419!3.14e-18!18;CL:0000790!3.14e-18!18;CL:0002057!1.32e-12!42;CL:0000945!2.60e-12!24;CL:0000826!2.60e-12!24;CL:0000766!3.78e-12!76;CL:0000625!6.34e-12!11;CL:0000860!4.81e-11!45;CL:0002009!5.14e-11!65;CL:0000557!7.17e-11!71;CL:0002194!2.16e-10!63;CL:0000576!2.16e-10!63;CL:0000040!2.16e-10!63;CL:0000559!2.16e-10!63;CL:0000236!2.30e-10!14;CL:0000763!1.04e-09!112;CL:0000049!1.04e-09!112;CL:0000839!2.71e-09!70;CL:0000624!4.96e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.68e-25;25!CL:0000791;3.72e-23;18!CL:0000789;3.72e-23;18!CL:0002419;3.72e-23;18!CL:0000542;1.36e-21;53!CL:0000625;5.51e-15;11!CL:0002087;9.06e-15;104!CL:0000945;1.48e-11;24!CL:0000738;1.38e-10;136!CL:0000236;1.81e-10;13!CL:0000624;1.20e-08;6!CL:0000860;2.67e-07;33!CL:0002057;2.67e-07;33 | |ontology_enrichment_celltype_v019=CL:0000084;1.68e-25;25!CL:0000791;3.72e-23;18!CL:0000789;3.72e-23;18!CL:0002419;3.72e-23;18!CL:0000542;1.36e-21;53!CL:0000625;5.51e-15;11!CL:0002087;9.06e-15;104!CL:0000945;1.48e-11;24!CL:0000738;1.38e-10;136!CL:0000236;1.81e-10;13!CL:0000624;1.20e-08;6!CL:0000860;2.67e-07;33!CL:0002057;2.67e-07;33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.46e-46,136;CL:0002087,1.61e-41,115;CL:0000542,1.42e-38,53;CL:0000051,1.42e-38,53;CL:0000838,4.97e-38,52;CL:0000037,1.30e-36,168;CL:0002031,1.87e-34,120;CL:0000988,3.22e-33,177;CL:0002032,1.34e-31,161;CL:0000837,1.34e-31,161;CL:0000084,1.73e-25,25;CL:0000827,1.73e-25,25;CL:0000791,3.81e-23,18;CL:0000789,3.81e-23,18;CL:0002420,3.81e-23,18;CL:0002419,3.81e-23,18;CL:0000790,3.81e-23,18;CL:0000625,5.66e-15,11;CL:0000945,1.42e-11,24;CL:0000826,1.42e-11,24;CL:0000236,1.87e-11,14;CL:0000624,1.20e-08,6;CL:0000766,1.45e-08,72;CL:0000860,1.01e-07,42;CL:0002057,1.01e-07,42;CL:0002009,2.22e-07,61;CL:0002194,3.07e-07,59;CL:0000576,3.07e-07,59;CL:0000040,3.07e-07,59;CL:0000559,3.07e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000790;3.72e-23;18!CL:0000051;1.36e-21;53 | |ontology_enrichment_development_v019=CL:0000790;3.72e-23;18!CL:0000051;1.36e-21;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.43e-25!115;UBERON:0002390!3.00e-17!102;UBERON:0003061!3.00e-17!102;UBERON:0002193!1.62e-15!112;UBERON:0002405!5.80e-09!115;UBERON:0002371!9.42e-09!80;UBERON:0000178!3.26e-08!15;UBERON:0000179!3.26e-08!15;UBERON:0000463!3.26e-08!15;UBERON:0001474!2.79e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!1.43e-25!115;UBERON:0002390!3.00e-17!102;UBERON:0003061!3.00e-17!102;UBERON:0002193!1.62e-15!112;UBERON:0002405!5.80e-09!115;UBERON:0002371!9.42e-09!80;UBERON:0000178!3.26e-08!15;UBERON:0000179!3.26e-08!15;UBERON:0000463!3.26e-08!15;UBERON:0001474!2.79e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.15e-10;15!UBERON:0000179;1.15e-10;15!UBERON:0000463;1.15e-10;15!UBERON:0002390;1.10e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.15e-10;15!UBERON:0000179;1.15e-10;15!UBERON:0000463;1.15e-10;15!UBERON:0002390;1.10e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.22e-14,98;UBERON:0003061,1.22e-14,98;UBERON:0002193,1.27e-13,108;UBERON:0000178,1.15e-10,15;UBERON:0000179,1.15e-10,15;UBERON:0000463,1.15e-10,15;UBERON:0007023,8.25e-09,114;UBERON:0002405,1.31e-07,93;UBERON:0004177,9.04e-07,7;UBERON:0005057,9.04e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7146586829714,14.7781061009902,19.6776953284198,27.1421351025744,62.1803624917485,22.448337880831,0,0,0,0.0774672005803016,0.142169232487422,1.17440175733939,19.9438347071476,23.8647892489469,33.2026632195253,7.3892106499175,26.5592806135563,7.98484259665978,1.59938062657521,1.51150377475524,1.21292030593908,0.929716147622738,3.70051099219643,0.929119112685311,1.1507695692886,2.81776777182011,0.945928919554341,0.344745680736619,2.5819387343353,2.70852973188684,1.31769637679823,1.09162460023138,0.674170453335254,2.44867113896722,2.88836124368484,1.91801137739712,2.96866170168044,0.598390972864896,0,0.580418477257168,4.53908179752912,2.4912889959823,2.26123798731069,1.0429658368404,1.08594422352558,5.44859552370032,2.57794345191295,1.58231193720442,0,0.212604299965044,0.209658645508376,0,0,0,0,0.19891667719909,0.182664153764634,17.5996244461323,14.1996038928154,17.7901850772711,17.9226693477933,13.6134635592244,9.19603903927173,13.8819423284821,8.58648379081828,5.69212969109448,5.87237189370939,3.82273228125229,1.32171328579026,15.1337312005015,1.58030450865046,108.977212643064,124.191401028736,167.976424682599,243.925096774999,204.027338912628,208.317034523283,286.39529075963,250.673527991641,234.50630234997,252.770173719912,251.576789437699,212.375408105169,214.207745431119,232.515197109598,248.991366025049,290.092888820788,227.916447580087,208.949386738066,342.876518080324,225.258973282762,222.267886289114,218.20342788147,201.909714231563,252.940938973333,251.318213188578,260.423860178855,227.82015516467,201.706899179363,219.878078732129,228.253270970432,236.484863113261,133.463664014773,116.069044970042,135.265993226534,0,0,0,0,0,0,0,0,0,0,0.702678285545008,3.07800827419625,0,0,2.27183175558278,2.96020553408754,1.06366368415092,0.476981248610684,3.43196946468077,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,11.6334079244498,0,0,0,0,0,1.41867352879343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,1.96565443335525,1.18157981336281,116.546258245468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0,0,0.621984346622316,0,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,129.234171024537,99.5005339019732,102.63872563313,108.193179583828,0,0,0,0,0,0,0,4.14415513436035,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,83.1207465014007,61.909975634943,94.9875264450655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36994326789761,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0982349809975,0,0,0,0,0,0.844430541190656,0,0,0,0.0962221127255121,4.02181365321472,0,2.82431402330337,0,0,0,0,112.145921640309,84.8747299928037,93.4221386965627,88.3839886948397,90.4997000789627,88.8408436334023,78.8445898367648,121.348151973023,0,0,0,1.30062222588003,0.721346064882224,47.6650350434375,56.1180480005455,13.1722385145659,0.766021480529467,5.92686031626872,0,0.280797178113459,0,0,0,5.75592044525451,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,1.17206543417515,0,0,0,0,0,0,0,0.281338832821026,0,0,0,1.79323189425963,59.6773257547279,0,0,0.123084805461069,0,0,0,0,3.84709281984041,69.4500967806125,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0.658156191461918,0,0,3.00106008164809,0,0,0,0,0.957003479195758,0.274792780205587,1.06606955203727,246.285848651725,0,0,0,0.19606253431774,0,0,0,0,0,0,0,3.98104772431402,7.51889298278383,5.49927130440263,0,0,0,0.269604531922708,1.60515529459758,0,4.74382451960732,0,0,1.18375320854817,14.5188859258397,0,3.1593289814244,0,0,0,0,0,0,0.284609546029793,0,0,0,0,2.62090002363045,0,0,0,0,4.26751672549045,0,0,0,0,0.189932387867636,0,0,7.47085481587734,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,1.27746588066972,0,70.4538109468563,0.558564802544508,1.3749625440701,0.717873024576814,0.199679000498991,0,0.89268582976749,0.53746777989381,0,0,0.0787831823072236,0,0,0,0,0,0.272406812223151,0,0,0,0.449947783103001,1.5476039091159,0.182248669974074,0,1.41850273138557,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75862680413699,1.32506888912221,0.129282956361551,0.66116300871345,0,0,12.1737650327172,1.10043013569766,7.87054205159671,35.2277875486485,0,71.4922552495859,0,0,0,0,0,0,0,0,0.3755727921195,0,0.776503360757966,0.620964029413834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,2.14346339723327,3.85308036908753,0.654261577023377,0,0,0,92.9941390725424,0,0,0,0,0,0,0,0,0,0,1.18812770967818,0,0,0,0,9.14796242014539,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0.138314504928436,0.645902582527404,0,0,0,0,0,0,0,0,1.80504788038217,0,0,0,0,0,0.0675375846183947,0.781078098613847,0.413373593002368,0.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| ||
|short_description=p1@LCK | |short_description=p1@LCK | ||
}} | }} |
Revision as of 11:34, 20 November 2012
Short description: | p1@LCK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LCK_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000355928, ENST00000398345, ENST00000482949, ENST00000495610_5end |
EntrezGene: | LCK |
HGNC: | 6524 |
UniProt: | P06239E9PKQ8E9PJ92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.46e-46 | 136 |
nongranular leukocyte | 1.61e-41 | 115 |
lymphocyte | 1.42e-38 | 53 |
common lymphoid progenitor | 1.42e-38 | 53 |
lymphoid lineage restricted progenitor cell | 4.97e-38 | 52 |
hematopoietic stem cell | 1.30e-36 | 168 |
hematopoietic lineage restricted progenitor cell | 1.87e-34 | 120 |
hematopoietic cell | 3.22e-33 | 177 |
hematopoietic oligopotent progenitor cell | 1.34e-31 | 161 |
hematopoietic multipotent progenitor cell | 1.34e-31 | 161 |
T cell | 1.73e-25 | 25 |
pro-T cell | 1.73e-25 | 25 |
mature alpha-beta T cell | 3.81e-23 | 18 |
alpha-beta T cell | 3.81e-23 | 18 |
immature T cell | 3.81e-23 | 18 |
mature T cell | 3.81e-23 | 18 |
immature alpha-beta T cell | 3.81e-23 | 18 |
CD8-positive, alpha-beta T cell | 5.66e-15 | 11 |
lymphocyte of B lineage | 1.42e-11 | 24 |
pro-B cell | 1.42e-11 | 24 |
B cell | 1.87e-11 | 14 |
CD4-positive, alpha-beta T cell | 1.20e-08 | 6 |
myeloid leukocyte | 1.45e-08 | 72 |
classical monocyte | 1.01e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.01e-07 | 42 |
macrophage dendritic cell progenitor | 2.22e-07 | 61 |
monopoietic cell | 3.07e-07 | 59 |
monocyte | 3.07e-07 | 59 |
monoblast | 3.07e-07 | 59 |
promonocyte | 3.07e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.22e-14 | 98 |
blood island | 1.22e-14 | 98 |
hemolymphoid system | 1.27e-13 | 108 |
blood | 1.15e-10 | 15 |
haemolymphatic fluid | 1.15e-10 | 15 |
organism substance | 1.15e-10 | 15 |
adult organism | 8.25e-09 | 114 |
immune system | 1.31e-07 | 93 |
hemopoietic organ | 9.04e-07 | 7 |
immune organ | 9.04e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.