FFCP PHASE1:Hg19::chr21:39705298..39705316,-: Difference between revisions
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|ontology_enrichment_development_v019=CL:0000335;4.48e-09;11 | |ontology_enrichment_development_v019=CL:0000335;4.48e-09;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.10e-15,3;UBERON:0000043,2.10e-15,3;UBERON:0007845,2.10e-15,3;UBERON:0006915,2.42e-15,3;UBERON:0007616,2.42e-15,3;UBERON:0002217,2.42e-15,3;UBERON:0002018,2.42e-15,3;UBERON:0004905,1.32e-12,8;UBERON:0000982,1.32e-12,8;UBERON:0004770,1.32e-12,8;UBERON:0007195,1.63e-11,1;UBERON:0002204,2.71e-07,167 | |||
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| ||
|short_description=p1@ENST00000414189 | |short_description=p1@ENST00000414189 | ||
}} | }} |
Revision as of 10:30, 20 November 2012
Short description: | p1@ENST00000414189 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000414189_5end |
Coexpression cluster: | C2632_Synoviocyte_mesenchymal_tenocyte_thyroid_Nucleus_Skeletal_Myoblast |
Association with transcript: | -12bp_to_ENST00000414189_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 6.71e-19 | 9 |
carbohydrate secreting cell | 6.71e-19 | 9 |
mesenchymal stem cell of the bone marrow | 9.06e-17 | 6 |
fibrocyte | 2.10e-15 | 3 |
tendon cell | 2.10e-15 | 3 |
synovial cell | 2.42e-15 | 3 |
stromal cell | 3.03e-13 | 28 |
multinucleate cell | 1.19e-11 | 1 |
myotube | 1.19e-11 | 1 |
extracellular matrix secreting cell | 1.91e-11 | 15 |
cell of skeletal muscle | 5.20e-11 | 9 |
bone marrow cell | 2.74e-10 | 10 |
osteoblast | 4.94e-09 | 11 |
osteoprogenitor cell | 4.94e-09 | 11 |
mesenchyme condensation cell | 4.94e-09 | 11 |
chondroblast | 9.33e-08 | 6 |
chondrocyte | 9.33e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.10e-15 | 3 |
tendon | 2.10e-15 | 3 |
regular connective tissue | 2.10e-15 | 3 |
stratified squamous epithelium | 2.42e-15 | 3 |
layer of synovial tissue | 2.42e-15 | 3 |
synovial joint | 2.42e-15 | 3 |
synovial membrane of synovial joint | 2.42e-15 | 3 |
articulation | 1.32e-12 | 8 |
skeletal joint | 1.32e-12 | 8 |
articular system | 1.32e-12 | 8 |
stroma of bone marrow | 1.63e-11 | 1 |
musculoskeletal system | 2.71e-07 | 167 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.