FFCP PHASE1:Hg19::chr11:65315433..65315460,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!3.08e-07!180;CL:0000057!5.26e-07!75 | |ontology_enrichment_celltype=CL:0000055!3.08e-07!180;CL:0000057!5.26e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002579;2.94e-13;3!CL:1000306;1.81e-10;4!CL:0002547;1.81e-10;4!CL:0000650;2.09e-09;2!CL:1000500;2.09e-09;2!CL:1000618;2.09e-09;2!CL:1001318;2.09e-09;2!CL:0002173;2.09e-09;2!CL:0002334;1.39e-08;12!CL:0000153;4.14e-08;9!CL:0000447;4.14e-08;9!CL:0000214;2.93e-07;3!CL:0000327;2.95e-07;15 | |ontology_enrichment_celltype_v019=CL:0002579;2.94e-13;3!CL:1000306;1.81e-10;4!CL:0002547;1.81e-10;4!CL:0000650;2.09e-09;2!CL:1000500;2.09e-09;2!CL:1000618;2.09e-09;2!CL:1001318;2.09e-09;2!CL:0002173;2.09e-09;2!CL:0002334;1.39e-08;12!CL:0000153;4.14e-08;9!CL:0000447;4.14e-08;9!CL:0000214;2.93e-07;3!CL:0000327;2.95e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002579,3.59e-13,3;CL:1000306,2.73e-10,4;CL:0002547,2.73e-10,4;CL:0000057,3.17e-09,76;CL:0000650,5.34e-09,2;CL:1000500,5.34e-09,2;CL:1000618,5.34e-09,2;CL:1001318,5.34e-09,2;CL:0002173,5.34e-09,2;CL:0002334,1.16e-08,12;CL:0000153,4.92e-08,9;CL:0000447,4.92e-08,9;CL:0000214,2.94e-07,3;CL:0000327,3.17e-07,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;8.60e-07;3!DOID:127;8.60e-07;3 | |ontology_enrichment_disease_v019=DOID:0060084;8.60e-07;3!DOID:127;8.60e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,5.66e-07,3;DOID:127,5.66e-07,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.40e-17;9!UBERON:0000042;2.40e-17;9!UBERON:0003688;9.14e-12;6!UBERON:0002358;9.14e-12;6!UBERON:0003684;9.14e-12;6!UBERON:0001178;9.14e-12;6!UBERON:0004797;1.81e-10;4!UBERON:0000415;1.81e-10;4!UBERON:0007240;1.81e-10;4!UBERON:0005742;1.81e-10;4!UBERON:0005734;1.81e-10;4!UBERON:0004664;1.81e-10;4!UBERON:0004663;1.81e-10;4!UBERON:0003891;4.58e-10;4!UBERON:0005406;8.57e-10;2!UBERON:0003567;2.09e-09;2!UBERON:0003838;2.09e-09;2!UBERON:0003586;2.09e-09;2!UBERON:0005169;2.09e-09;2!UBERON:0002321;2.09e-09;2!UBERON:0005215;2.09e-09;2!UBERON:0002303;2.09e-09;2!UBERON:0002319;2.09e-09;2!UBERON:0006915;2.93e-07;3!UBERON:0007616;2.93e-07;3!UBERON:0002217;2.93e-07;3!UBERON:0002018;2.93e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0004457;2.40e-17;9!UBERON:0000042;2.40e-17;9!UBERON:0003688;9.14e-12;6!UBERON:0002358;9.14e-12;6!UBERON:0003684;9.14e-12;6!UBERON:0001178;9.14e-12;6!UBERON:0004797;1.81e-10;4!UBERON:0000415;1.81e-10;4!UBERON:0007240;1.81e-10;4!UBERON:0005742;1.81e-10;4!UBERON:0005734;1.81e-10;4!UBERON:0004664;1.81e-10;4!UBERON:0004663;1.81e-10;4!UBERON:0003891;4.58e-10;4!UBERON:0005406;8.57e-10;2!UBERON:0003567;2.09e-09;2!UBERON:0003838;2.09e-09;2!UBERON:0003586;2.09e-09;2!UBERON:0005169;2.09e-09;2!UBERON:0002321;2.09e-09;2!UBERON:0005215;2.09e-09;2!UBERON:0002303;2.09e-09;2!UBERON:0002319;2.09e-09;2!UBERON:0006915;2.93e-07;3!UBERON:0007616;2.93e-07;3!UBERON:0002217;2.93e-07;3!UBERON:0002018;2.93e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,8.18e-13,12;UBERON:0000042,8.18e-13,12;UBERON:0003688,1.02e-11,6;UBERON:0002358,1.02e-11,6;UBERON:0003684,1.02e-11,6;UBERON:0001178,1.02e-11,6;UBERON:0000415,2.73e-10,4;UBERON:0007240,2.73e-10,4;UBERON:0005742,2.73e-10,4;UBERON:0005734,2.73e-10,4;UBERON:0004664,2.73e-10,4;UBERON:0004663,2.73e-10,4;UBERON:0005406,5.67e-10,2;UBERON:0003891,1.35e-09,4;UBERON:0003567,5.34e-09,2;UBERON:0003838,5.34e-09,2;UBERON:0003586,5.34e-09,2;UBERON:0005169,5.34e-09,2;UBERON:0002321,5.34e-09,2;UBERON:0005215,5.34e-09,2;UBERON:0002303,5.34e-09,2;UBERON:0002319,5.34e-09,2;UBERON:0004923,2.63e-08,66;UBERON:0006915,2.94e-07,3;UBERON:0007616,2.94e-07,3;UBERON:0002217,2.94e-07,3;UBERON:0002018,2.94e-07,3 | |||
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| ||
|short_description=p19@LTBP3 | |short_description=p19@LTBP3 | ||
}} | }} |
Revision as of 09:47, 20 November 2012
Short description: | p19@LTBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_LTBP3_5end |
Coexpression cluster: | NA |
Association with transcript: | -397bp_to_ENST00000527339_5end |
EntrezGene: | LTBP3 |
HGNC: | 6716 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 3.59e-13 | 3 |
fibroblast of tunica adventitia of artery | 2.73e-10 | 4 |
fibroblast of the aortic adventitia | 2.73e-10 | 4 |
fibroblast | 3.17e-09 | 76 |
mesangial cell | 5.34e-09 | 2 |
kidney interstitial cell | 5.34e-09 | 2 |
juxtaglomerular complex cell | 5.34e-09 | 2 |
renal interstitial pericyte | 5.34e-09 | 2 |
extraglomerular mesangial cell | 5.34e-09 | 2 |
preadipocyte | 1.16e-08 | 12 |
GAG secreting cell | 4.92e-08 | 9 |
carbohydrate secreting cell | 4.92e-08 | 9 |
synovial cell | 2.94e-07 | 3 |
extracellular matrix secreting cell | 3.17e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 8.18e-13 | 12 |
serous membrane | 8.18e-13 | 12 |
omentum | 1.02e-11 | 6 |
peritoneum | 1.02e-11 | 6 |
abdominal cavity | 1.02e-11 | 6 |
visceral peritoneum | 1.02e-11 | 6 |
artery wall | 2.73e-10 | 4 |
tunica adventitia of artery | 2.73e-10 | 4 |
adventitia | 2.73e-10 | 4 |
tunica adventitia of blood vessel | 2.73e-10 | 4 |
aorta tunica adventitia | 2.73e-10 | 4 |
aorta wall | 2.73e-10 | 4 |
perirenal fat | 5.67e-10 | 2 |
stroma | 1.35e-09 | 4 |
abdomen connective tissue | 5.34e-09 | 2 |
abdominal segment connective tissue | 5.34e-09 | 2 |
trunk connective tissue | 5.34e-09 | 2 |
interstitial tissue | 5.34e-09 | 2 |
extraglomerular mesangium | 5.34e-09 | 2 |
kidney interstitium | 5.34e-09 | 2 |
juxtaglomerular apparatus | 5.34e-09 | 2 |
mesangium | 5.34e-09 | 2 |
organ component layer | 2.63e-08 | 66 |
stratified squamous epithelium | 2.94e-07 | 3 |
layer of synovial tissue | 2.94e-07 | 3 |
synovial joint | 2.94e-07 | 3 |
synovial membrane of synovial joint | 2.94e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 5.66e-07 | 3 |
leiomyoma | 5.66e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.