FFCP PHASE1:Hg19::chrX:69308514..69308559,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002579!9.18e-19!3;CL:0000197!1.27e-16!6;CL:0000098!1.27e-16!6;CL:0002167!1.27e-16!6;CL:0000057!5.06e-14!75;CL:0002334!2.85e-12!12;CL:0002617!4.30e-12!2;CL:0000055!1.66e-10!180;CL:0002620!2.88e-08!23;CL:0002581!1.98e-07!1 | |ontology_enrichment_celltype=CL:0002579!9.18e-19!3;CL:0000197!1.27e-16!6;CL:0000098!1.27e-16!6;CL:0002167!1.27e-16!6;CL:0000057!5.06e-14!75;CL:0002334!2.85e-12!12;CL:0002617!4.30e-12!2;CL:0000055!1.66e-10!180;CL:0002620!2.88e-08!23;CL:0002581!1.98e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000197;3.81e-59;6!CL:0000098;3.81e-59;6!CL:0002167;3.81e-59;6!CL:0002579;4.83e-30;3!CL:0002581;3.67e-23;1!CL:0000710;3.65e-18;20!CL:0002334;4.40e-17;12!CL:0000075;1.42e-13;27!CL:0000047;2.74e-12;2!CL:0002077;8.60e-10;34 | |ontology_enrichment_celltype_v019=CL:0000197;3.81e-59;6!CL:0000098;3.81e-59;6!CL:0002167;3.81e-59;6!CL:0002579;4.83e-30;3!CL:0002581;3.67e-23;1!CL:0000710;3.65e-18;20!CL:0002334;4.40e-17;12!CL:0000075;1.42e-13;27!CL:0000047;2.74e-12;2!CL:0002077;8.60e-10;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0000197,4.78e-59,6;CL:0000098,4.78e-59,6;CL:0002167,4.78e-59,6;CL:0002579,4.84e-30,3;CL:0002581,3.28e-23,1;CL:0000710,3.90e-18,20;CL:0002334,4.28e-17,12;CL:0000075,1.49e-13,27;CL:0002077,7.56e-11,34;CL:0000133,3.03e-09,59;CL:0000221,1.22e-07,72 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2513!1.86e-07!1;DOID:4235!3.82e-07!1 | |ontology_enrichment_disease=DOID:2513!1.86e-07!1;DOID:4235!3.82e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:2513;3.67e-23;1!DOID:3451;2.74e-12;2!DOID:4159;2.74e-12;2!DOID:0060122;2.74e-12;2 | |ontology_enrichment_disease_v019=DOID:2513;3.67e-23;1!DOID:3451;2.74e-12;2!DOID:4159;2.74e-12;2!DOID:0060122;2.74e-12;2 | ||
|ontology_enrichment_disease_v019_2=DOID:2513,2.62e-23,1;DOID:3451,2.32e-12,2;DOID:4159,2.32e-12,2;DOID:0060122,2.32e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0003688!3.00e-16!6;UBERON:0002358!3.00e-16!6;UBERON:0003684!3.00e-16!6;UBERON:0001178!3.00e-16!6;UBERON:0004457!3.59e-08!12;UBERON:0000042!3.59e-08!12;UBERON:0002171!2.67e-07!1;UBERON:0006518!2.67e-07!1;UBERON:0008949!2.67e-07!1;UBERON:0000101!2.67e-07!1;UBERON:0002167!2.67e-07!1 | |ontology_enrichment_uberon=UBERON:0003688!3.00e-16!6;UBERON:0002358!3.00e-16!6;UBERON:0003684!3.00e-16!6;UBERON:0001178!3.00e-16!6;UBERON:0004457!3.59e-08!12;UBERON:0000042!3.59e-08!12;UBERON:0002171!2.67e-07!1;UBERON:0006518!2.67e-07!1;UBERON:0008949!2.67e-07!1;UBERON:0000101!2.67e-07!1;UBERON:0002167!2.67e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.41e-15;6!UBERON:0002358;1.41e-15;6!UBERON:0003684;1.41e-15;6!UBERON:0001178;1.41e-15;6!UBERON:0005406;2.74e-12;2!UBERON:0004457;1.02e-10;9!UBERON:0000042;1.02e-10;9!UBERON:0000014;8.85e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0003688;1.41e-15;6!UBERON:0002358;1.41e-15;6!UBERON:0003684;1.41e-15;6!UBERON:0001178;1.41e-15;6!UBERON:0005406;2.74e-12;2!UBERON:0004457;1.02e-10;9!UBERON:0000042;1.02e-10;9!UBERON:0000014;8.85e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.41e-15,6;UBERON:0002358,1.41e-15,6;UBERON:0003684,1.41e-15,6;UBERON:0001178,1.41e-15,6;UBERON:0005406,2.59e-12,2;UBERON:0004457,2.85e-08,12;UBERON:0000042,2.85e-08,12;UBERON:0000014,8.14e-07,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0.211931901159562,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,1.24782516918484,3.56857977594324,5.67728694122165,4.21709093973768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,1.79394808957981,1.02341449813341,0.965123526861645,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55519793830904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0.211931901159562,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,1.24782516918484,3.56857977594324,5.67728694122165,4.21709093973768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,1.79394808957981,1.02341449813341,0.965123526861645,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55519793830904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chrX:69308514..69308559,+ | |short_description=p@chrX:69308514..69308559,+ | ||
}} | }} |
Revision as of 08:30, 20 November 2012
Short description: | p@chrX:69308514..69308559, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:69308514..69308559, + |
Coexpression cluster: | C465_Olfactory_basal_Fibroblast_Preadipocyte_Adipocyte_small_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 4.78e-59 | 6 |
sensory epithelial cell | 4.78e-59 | 6 |
olfactory epithelial cell | 4.78e-59 | 6 |
omentum preadipocyte | 4.84e-30 | 3 |
perirenal preadipocyte | 3.28e-23 | 1 |
neurecto-epithelial cell | 3.90e-18 | 20 |
preadipocyte | 4.28e-17 | 12 |
columnar/cuboidal epithelial cell | 1.49e-13 | 27 |
ecto-epithelial cell | 7.56e-11 | 34 |
neurectodermal cell | 3.03e-09 | 59 |
ectodermal cell | 1.22e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.41e-15 | 6 |
peritoneum | 1.41e-15 | 6 |
abdominal cavity | 1.41e-15 | 6 |
visceral peritoneum | 1.41e-15 | 6 |
perirenal fat | 2.59e-12 | 2 |
cavity lining | 2.85e-08 | 12 |
serous membrane | 2.85e-08 | 12 |
zone of skin | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.62e-23 | 1 |
skin carcinoma | 2.32e-12 | 2 |
skin cancer | 2.32e-12 | 2 |
integumentary system cancer | 2.32e-12 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.