FFCP PHASE1:Hg19::chr3:193877020..193877026,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.10e-22!254;CL:0000223!2.48e-14!59;CL:0002076!4.27e-13!43;CL:0002251!1.36e-07!21 | |ontology_enrichment_celltype=CL:0000066!1.10e-22!254;CL:0000223!2.48e-14!59;CL:0002076!4.27e-13!43;CL:0002251!1.36e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.78e-09;42!CL:0002251;6.41e-08;20 | |ontology_enrichment_celltype_v019=CL:0002076;3.78e-09;42!CL:0002251;6.41e-08;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.14e-13,253;CL:0000223,3.99e-11,58;CL:0002076,1.00e-10,42;CL:0002251,6.66e-08,20;CL:0000076,9.33e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0008425;9.13e-08;1 | |ontology_enrichment_development_v019=UBERON:0008425;9.13e-08;1 | ||
|ontology_enrichment_disease=DOID:305!4.31e-43!106;DOID:0050687!8.61e-43!143;DOID:162!3.87e-40!235;DOID:14566!9.62e-39!239;DOID:299!4.46e-18!25;DOID:1749!2.26e-16!14;DOID:0050686!4.93e-12!137;DOID:7!8.12e-11!39;DOID:3119!4.77e-08!14 | |ontology_enrichment_disease=DOID:305!4.31e-43!106;DOID:0050687!8.61e-43!143;DOID:162!3.87e-40!235;DOID:14566!9.62e-39!239;DOID:299!4.46e-18!25;DOID:1749!2.26e-16!14;DOID:0050686!4.93e-12!137;DOID:7!8.12e-11!39;DOID:3119!4.77e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;6.04e-28;14!DOID:3493;1.63e-13;2!DOID:305;1.42e-11;106!DOID:4362;1.45e-11;5!DOID:7;6.02e-10;39!DOID:299;1.33e-08;25!DOID:0050619;5.39e-08;1!DOID:1357;5.39e-08;1!DOID:178;1.97e-07;1!DOID:326;1.97e-07;1!DOID:3978;1.97e-07;1!DOID:3394;1.97e-07;1!DOID:5844;1.97e-07;1!DOID:3112;1.97e-07;1 | |ontology_enrichment_disease_v019=DOID:1749;6.04e-28;14!DOID:3493;1.63e-13;2!DOID:305;1.42e-11;106!DOID:4362;1.45e-11;5!DOID:7;6.02e-10;39!DOID:299;1.33e-08;25!DOID:0050619;5.39e-08;1!DOID:1357;5.39e-08;1!DOID:178;1.97e-07;1!DOID:326;1.97e-07;1!DOID:3978;1.97e-07;1!DOID:3394;1.97e-07;1!DOID:5844;1.97e-07;1!DOID:3112;1.97e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.13e-29,106;DOID:1749,4.72e-28,14;DOID:0050687,7.84e-23,143;DOID:162,7.53e-16,235;DOID:14566,2.07e-15,239;DOID:3493,2.39e-13,2;DOID:7,1.21e-11,39;DOID:4362,1.65e-11,5;DOID:299,1.36e-08,25;DOID:0050619,5.22e-08,1;DOID:1357,5.22e-08,1;DOID:178,1.48e-07,1;DOID:326,1.48e-07,1;DOID:3978,1.48e-07,1;DOID:3394,1.48e-07,1;DOID:5844,1.48e-07,1;DOID:3112,1.58e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000344!2.98e-10!12;UBERON:0003729!1.03e-08!5;UBERON:0004119!3.85e-08!169;UBERON:0000925!3.85e-08!169;UBERON:0006595!3.85e-08!169;UBERON:0003343!9.89e-08!4;UBERON:0004785!9.89e-08!4;UBERON:0001007!1.59e-07!155;UBERON:0001555!1.59e-07!155;UBERON:0007026!1.59e-07!155 | |ontology_enrichment_uberon=UBERON:0000344!2.98e-10!12;UBERON:0003729!1.03e-08!5;UBERON:0004119!3.85e-08!169;UBERON:0000925!3.85e-08!169;UBERON:0006595!3.85e-08!169;UBERON:0003343!9.89e-08!4;UBERON:0004785!9.89e-08!4;UBERON:0001007!1.59e-07!155;UBERON:0001555!1.59e-07!155;UBERON:0007026!1.59e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0000002;1.01e-09;6!UBERON:0001560;1.01e-09;6!UBERON:0001764;5.39e-08;1!UBERON:0001825;5.39e-08;1!UBERON:0003343;1.86e-07;4!UBERON:0004785;1.86e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000002;1.01e-09;6!UBERON:0001560;1.01e-09;6!UBERON:0001764;5.39e-08;1!UBERON:0001825;5.39e-08;1!UBERON:0003343;1.86e-07;4!UBERON:0004785;1.86e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,1.12e-09,6;UBERON:0001560,1.12e-09,6;UBERON:0001764,5.22e-08,1;UBERON:0001825,5.22e-08,1;UBERON:0003343,1.86e-07,4;UBERON:0004785,1.86e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0,0.217879444092406,0.474541238222193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,1.78657797492418,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,1.08890984861323,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,1.96032172784825,0.185803175125719,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.334330152832435,0,0,0,0,0,0,0,0.16480387422676,0.211125408127993,0.398495976502139,0,0,0,0,0,1.43789361835723,0,0,0,0,0,0,0,0,0.7812832832557,2.79871999987826,0,6.37243310398798,1.01701460117107,5.43691668066254,0.689486746482929,0.291604613383254,0,0,0,0,0,0,0,1.30726156222788,1.11538995422883,0,0,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0.317873157960757,0.210998064528027,2.28525931422807,3.25112064298064,0.216388639742091,0,0,0,0.889563386041866,0.123563938946503,0,0,0,0,0,3.91329237864179,0.485560759068186,0,0,0,0,0.150323419414493,0,0,0,0.313932918407225,0,0.569219092059585,0,0.694238953340524,0.195984794828755,1.39294730528644,0,0.171986032471617,0.19351266257817,0.146178634172371,0.574808199372465,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0.213452994739353,0.39961921916426,0,0.229073192331831,0,2.73704116177484,0.124252535565433,0.471388069233591,0.67952103036807,0.523014231561666,0.305994652908965,0,0,0,0,0,0.262887354279314,0,0,0,1.59743200399193,0,0,0,0,1.16495949527454,0.0787831823072236,0,0,0.0984274815147488,0.169346664131569,0,0,0.160753148465019,0,0,0,0,0,0.335434687599266,0.0788057072991982,0,0,0,1.34340638123612,0,0,0,0,0,0,0,0.656740165994712,0,0.113312091520126,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0.121792598380896,0,0,0,0,0,4.24046059875633,0,0,0,0,0,0,0,0,0.606596470166591,0.570930667089935,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56241518587947,0,0,0,0,0,0,0.327609848846413,0,0.633936370075881,0,0,0.172214979660816,0,0,0.139879507719444,0,0,0,0.629063767423586,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,4.12894031717091,0.550285795565037,2.65709032145778,0,0,0,0,0,0,0,1.47394725759087,0.591424344868181,0,0,0,0,0,0,0,0,9.07113236241126,0,0,0,0,0,0.115233987555779,0,0,0,1.30013224972365,0.889851215136553,0,0,0.560544326627578,0,0.647782773655864,0,0,0,0,0.173858272302579,0,0.207216164163037,0,0,0,0,0,0,2.97838929107265,0,0,0.671132590786754,1.17780280338292,2.07260472469858,0,0,0,0,0,0,0,0.11294608203896,0,0,0,1.09279780251979,0,0,0,0,0,0,0,0,0,0,2.49975514047921,3.17605384544123,0,0,0,0,0,0,0,0,0,0,0,0.630832124175395,1.74824915141913,0.886889507080059,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0.976839223331694,0,0,0.718601616852695,0,0,0,0,0,0.320568492303233 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0,0.217879444092406,0.474541238222193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,1.78657797492418,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,1.08890984861323,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,1.96032172784825,0.185803175125719,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.334330152832435,0,0,0,0,0,0,0,0.16480387422676,0.211125408127993,0.398495976502139,0,0,0,0,0,1.43789361835723,0,0,0,0,0,0,0,0,0.7812832832557,2.79871999987826,0,6.37243310398798,1.01701460117107,5.43691668066254,0.689486746482929,0.291604613383254,0,0,0,0,0,0,0,1.30726156222788,1.11538995422883,0,0,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0.317873157960757,0.210998064528027,2.28525931422807,3.25112064298064,0.216388639742091,0,0,0,0.889563386041866,0.123563938946503,0,0,0,0,0,3.91329237864179,0.485560759068186,0,0,0,0,0.150323419414493,0,0,0,0.313932918407225,0,0.569219092059585,0,0.694238953340524,0.195984794828755,1.39294730528644,0,0.171986032471617,0.19351266257817,0.146178634172371,0.574808199372465,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0.213452994739353,0.39961921916426,0,0.229073192331831,0,2.73704116177484,0.124252535565433,0.471388069233591,0.67952103036807,0.523014231561666,0.305994652908965,0,0,0,0,0,0.262887354279314,0,0,0,1.59743200399193,0,0,0,0,1.16495949527454,0.0787831823072236,0,0,0.0984274815147488,0.169346664131569,0,0,0.160753148465019,0,0,0,0,0,0.335434687599266,0.0788057072991982,0,0,0,1.34340638123612,0,0,0,0,0,0,0,0.656740165994712,0,0.113312091520126,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0.121792598380896,0,0,0,0,0,4.24046059875633,0,0,0,0,0,0,0,0,0.606596470166591,0.570930667089935,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56241518587947,0,0,0,0,0,0,0.327609848846413,0,0.633936370075881,0,0,0.172214979660816,0,0,0.139879507719444,0,0,0,0.629063767423586,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,4.12894031717091,0.550285795565037,2.65709032145778,0,0,0,0,0,0,0,1.47394725759087,0.591424344868181,0,0,0,0,0,0,0,0,9.07113236241126,0,0,0,0,0,0.115233987555779,0,0,0,1.30013224972365,0.889851215136553,0,0,0.560544326627578,0,0.647782773655864,0,0,0,0,0.173858272302579,0,0.207216164163037,0,0,0,0,0,0,2.97838929107265,0,0,0.671132590786754,1.17780280338292,2.07260472469858,0,0,0,0,0,0,0,0.11294608203896,0,0,0,1.09279780251979,0,0,0,0,0,0,0,0,0,0,2.49975514047921,3.17605384544123,0,0,0,0,0,0,0,0,0,0,0,0.630832124175395,1.74824915141913,0.886889507080059,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0.976839223331694,0,0,0.718601616852695,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr3:193877020..193877026,+ | |short_description=p@chr3:193877020..193877026,+ | ||
}} | }} |
Revision as of 06:05, 20 November 2012
Short description: | p@chr3:193877020..193877026, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:193877020..193877026, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.14e-13 | 253 |
endodermal cell | 3.99e-11 | 58 |
endo-epithelial cell | 1.00e-10 | 42 |
epithelial cell of alimentary canal | 6.66e-08 | 20 |
squamous epithelial cell | 9.33e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 1.12e-09 | 6 |
neck of organ | 1.12e-09 | 6 |
maxillary sinus | 5.22e-08 | 1 |
paranasal sinus | 5.22e-08 | 1 |
mucosa of oral region | 1.86e-07 | 4 |
respiratory system mucosa | 1.86e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.13e-29 | 106 |
squamous cell carcinoma | 4.72e-28 | 14 |
cell type cancer | 7.84e-23 | 143 |
cancer | 7.53e-16 | 235 |
disease of cellular proliferation | 2.07e-15 | 239 |
signet ring cell adenocarcinoma | 2.39e-13 | 2 |
disease of anatomical entity | 1.21e-11 | 39 |
cervical cancer | 1.65e-11 | 5 |
adenocarcinoma | 1.36e-08 | 25 |
paranasal sinus cancer | 5.22e-08 | 1 |
maxillary sinus cancer | 5.22e-08 | 1 |
vascular disease | 1.48e-07 | 1 |
ischemia | 1.48e-07 | 1 |
extrinsic cardiomyopathy | 1.48e-07 | 1 |
myocardial ischemia | 1.48e-07 | 1 |
myocardial infarction | 1.48e-07 | 1 |
papillary adenocarcinoma | 1.58e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.