FFCP PHASE1:Hg19::chr15:63340734..63340769,+: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.98e-07;31 | |ontology_enrichment_development_v019=UBERON:0003104;1.98e-07;31 | ||
|ontology_enrichment_disease=DOID:305!1.13e-07!106 | |ontology_enrichment_disease=DOID:305!1.13e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,9.38e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.51e-19!115;UBERON:0000481!5.50e-14!347;UBERON:0000468!1.35e-13!659;UBERON:0000477!2.22e-12!286;UBERON:0004921!1.03e-11!129;UBERON:0004185!1.03e-11!129;UBERON:0004111!2.03e-11!241;UBERON:0001007!4.86e-11!155;UBERON:0001555!4.86e-11!155;UBERON:0007026!4.86e-11!155;UBERON:0000922!2.73e-10!612;UBERON:0000119!4.33e-10!312;UBERON:0000467!4.98e-10!625;UBERON:0000483!6.68e-10!309;UBERON:0000480!9.16e-10!626;UBERON:0004119!2.52e-09!169;UBERON:0000925!2.52e-09!169;UBERON:0006595!2.52e-09!169;UBERON:0003104!6.87e-09!238;UBERON:0009142!6.87e-09!238;UBERON:0000025!7.63e-09!194;UBERON:0000077!1.19e-08!130;UBERON:0002100!1.36e-08!216;UBERON:0002050!1.76e-08!605;UBERON:0005423!1.76e-08!605;UBERON:0000475!2.28e-08!365;UBERON:0000490!2.39e-08!138;UBERON:0000923!3.34e-08!604;UBERON:0005291!3.34e-08!604;UBERON:0006598!3.34e-08!604;UBERON:0002532!3.34e-08!604;UBERON:0001048!1.04e-07!168;UBERON:0009497!1.07e-07!25;UBERON:0000015!1.07e-07!25;UBERON:0002423!1.07e-07!25;UBERON:0006235!1.07e-07!25;UBERON:0004161!1.07e-07!25;UBERON:0000160!3.10e-07!27;UBERON:0009854!3.35e-07!23;UBERON:0009856!6.14e-07!26;UBERON:0005409!6.38e-07!35;UBERON:0008835!7.43e-07!22;UBERON:0003894!7.43e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!1.51e-19!115;UBERON:0000481!5.50e-14!347;UBERON:0000468!1.35e-13!659;UBERON:0000477!2.22e-12!286;UBERON:0004921!1.03e-11!129;UBERON:0004185!1.03e-11!129;UBERON:0004111!2.03e-11!241;UBERON:0001007!4.86e-11!155;UBERON:0001555!4.86e-11!155;UBERON:0007026!4.86e-11!155;UBERON:0000922!2.73e-10!612;UBERON:0000119!4.33e-10!312;UBERON:0000467!4.98e-10!625;UBERON:0000483!6.68e-10!309;UBERON:0000480!9.16e-10!626;UBERON:0004119!2.52e-09!169;UBERON:0000925!2.52e-09!169;UBERON:0006595!2.52e-09!169;UBERON:0003104!6.87e-09!238;UBERON:0009142!6.87e-09!238;UBERON:0000025!7.63e-09!194;UBERON:0000077!1.19e-08!130;UBERON:0002100!1.36e-08!216;UBERON:0002050!1.76e-08!605;UBERON:0005423!1.76e-08!605;UBERON:0000475!2.28e-08!365;UBERON:0000490!2.39e-08!138;UBERON:0000923!3.34e-08!604;UBERON:0005291!3.34e-08!604;UBERON:0006598!3.34e-08!604;UBERON:0002532!3.34e-08!604;UBERON:0001048!1.04e-07!168;UBERON:0009497!1.07e-07!25;UBERON:0000015!1.07e-07!25;UBERON:0002423!1.07e-07!25;UBERON:0006235!1.07e-07!25;UBERON:0004161!1.07e-07!25;UBERON:0000160!3.10e-07!27;UBERON:0009854!3.35e-07!23;UBERON:0009856!6.14e-07!26;UBERON:0005409!6.38e-07!35;UBERON:0008835!7.43e-07!22;UBERON:0003894!7.43e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.18e-07;25!UBERON:0000160;7.80e-07;17 | |ontology_enrichment_uberon_v019=UBERON:0002423;1.18e-07;25!UBERON:0000160;7.80e-07;17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.66e-20,114;UBERON:0011216,6.68e-12,223;UBERON:0004921,6.63e-10,118;UBERON:0004111,1.40e-09,240;UBERON:0001007,7.97e-09,145;UBERON:0001555,7.97e-09,145;UBERON:0007026,7.97e-09,145;UBERON:0003104,1.89e-08,160;UBERON:0009142,1.89e-08,160;UBERON:0000119,5.35e-08,309;UBERON:0000483,7.96e-08,306;UBERON:0004119,9.15e-08,160;UBERON:0000925,9.15e-08,160;UBERON:0006595,9.15e-08,160;UBERON:0005256,9.30e-08,122;UBERON:0002100,9.75e-08,199;UBERON:0009497,1.02e-07,25;UBERON:0000015,1.02e-07,25;UBERON:0002423,1.02e-07,25;UBERON:0006235,1.02e-07,25;UBERON:0004161,1.02e-07,25;UBERON:0000025,2.79e-07,192;UBERON:0009854,3.36e-07,23;UBERON:0000490,5.65e-07,148;UBERON:0000160,7.31e-07,17;UBERON:0008835,7.65e-07,22;UBERON:0003894,7.65e-07,22 | |||
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| ||
|short_description=p4@TPM1 | |short_description=p4@TPM1 | ||
}} | }} |
Revision as of 23:56, 19 November 2012
Short description: | p4@TPM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TPM1_5end |
Coexpression cluster: | C3503_osteoclastoma_acute_small_hepatoblastoma_stomach_sacrococcigeal_heart |
Association with transcript: | 0bp_to_ENST00000558868, ENST00000560959_5end |
EntrezGene: | TPM1 |
HGNC: | 12010 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.66e-20 | 114 |
organ system subdivision | 6.68e-12 | 223 |
subdivision of digestive tract | 6.63e-10 | 118 |
anatomical conduit | 1.40e-09 | 240 |
digestive system | 7.97e-09 | 145 |
digestive tract | 7.97e-09 | 145 |
primitive gut | 7.97e-09 | 145 |
mesenchyme | 1.89e-08 | 160 |
entire embryonic mesenchyme | 1.89e-08 | 160 |
cell layer | 5.35e-08 | 309 |
epithelium | 7.96e-08 | 306 |
endoderm-derived structure | 9.15e-08 | 160 |
endoderm | 9.15e-08 | 160 |
presumptive endoderm | 9.15e-08 | 160 |
trunk mesenchyme | 9.30e-08 | 122 |
trunk | 9.75e-08 | 199 |
epithelium of foregut-midgut junction | 1.02e-07 | 25 |
anatomical boundary | 1.02e-07 | 25 |
hepatobiliary system | 1.02e-07 | 25 |
foregut-midgut junction | 1.02e-07 | 25 |
septum transversum | 1.02e-07 | 25 |
tube | 2.79e-07 | 192 |
digestive tract diverticulum | 3.36e-07 | 23 |
unilaminar epithelium | 5.65e-07 | 148 |
intestine | 7.31e-07 | 17 |
hepatic diverticulum | 7.65e-07 | 22 |
liver primordium | 7.65e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.38e-07 | 106 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.