FFCP PHASE1:Hg19::chr2:135805029..135805039,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.90e-12;2!UBERON:0008947;1.54e-07;29 | |ontology_enrichment_development_v019=UBERON:0007297;2.90e-12;2!UBERON:0008947;1.54e-07;29 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@YSK4 | |short_description=p2@YSK4 | ||
}} | }} |
Revision as of 19:33, 19 November 2012
Short description: | p2@YSK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_YSK4_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000468155, uc010fne.1_5end |
EntrezGene: | YSK4 |
HGNC: | 26249 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 1.98e-30 | 3 |
myelencephalon | 1.98e-30 | 3 |
future myelencephalon | 1.98e-30 | 3 |
epididymis | 2.62e-23 | 1 |
corpus callosum | 6.40e-23 | 1 |
central nervous system cell part cluster | 6.40e-23 | 1 |
axon tract | 6.40e-23 | 1 |
intercerebral commissure | 6.40e-23 | 1 |
dorsal telencephalic commissure | 6.40e-23 | 1 |
brain white matter | 6.40e-23 | 1 |
brain commissure | 6.40e-23 | 1 |
white matter | 6.40e-23 | 1 |
nervous system commissure | 6.40e-23 | 1 |
cerebral hemisphere white matter | 6.40e-23 | 1 |
brainstem | 9.04e-16 | 6 |
open tracheal system trachea | 1.48e-12 | 2 |
throat | 3.24e-12 | 2 |
multi cell component structure | 3.62e-12 | 2 |
neuron projection bundle | 3.62e-12 | 2 |
adult organism | 2.41e-09 | 114 |
male genital duct | 1.12e-08 | 3 |
internal male genitalia | 1.12e-08 | 3 |
segmental subdivision of hindbrain | 2.29e-08 | 12 |
hindbrain | 2.29e-08 | 12 |
presumptive hindbrain | 2.29e-08 | 12 |
segmental subdivision of nervous system | 8.59e-08 | 13 |
posterior neural tube | 7.20e-07 | 15 |
chordal neural plate | 7.20e-07 | 15 |
duct of male reproductive system | 8.14e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.