FFCP PHASE1:Hg19::chr11:66494894..66494908,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000066!8.18e-12!254;CL:0000223!5.74e-07!59 | |ontology_enrichment_celltype=CL:0000066!8.18e-12!254;CL:0000223!5.74e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.10e-22;12 | |ontology_enrichment_celltype_v019=CL:0000182;6.10e-22;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.33e-22,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!8.92e-11!106;DOID:0050687!3.21e-09!143;DOID:3493!1.94e-07!2 | |ontology_enrichment_disease=DOID:305!8.92e-11!106;DOID:0050687!3.21e-09!143;DOID:3493!1.94e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!2.72e-10!44;UBERON:0001008!5.34e-10!45;UBERON:0005172!2.53e-09!55;UBERON:0005173!2.53e-09!55;UBERON:0002417!4.24e-08!61;UBERON:0000916!4.24e-08!61;UBERON:0003064!2.46e-07!37;UBERON:0000489!2.90e-07!32;UBERON:0002113!4.84e-07!27;UBERON:0003918!4.84e-07!27;UBERON:0005095!4.84e-07!27;UBERON:0007687!4.84e-07!27;UBERON:0000060!5.70e-07!12;UBERON:0000344!7.31e-07!12;UBERON:0003350!8.71e-07!5 | |ontology_enrichment_uberon=UBERON:0006554!2.72e-10!44;UBERON:0001008!5.34e-10!45;UBERON:0005172!2.53e-09!55;UBERON:0005173!2.53e-09!55;UBERON:0002417!4.24e-08!61;UBERON:0000916!4.24e-08!61;UBERON:0003064!2.46e-07!37;UBERON:0000489!2.90e-07!32;UBERON:0002113!4.84e-07!27;UBERON:0003918!4.84e-07!27;UBERON:0005095!4.84e-07!27;UBERON:0007687!4.84e-07!27;UBERON:0000060!5.70e-07!12;UBERON:0000344!7.31e-07!12;UBERON:0003350!8.71e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.38e-24;19!UBERON:0006925;2.38e-24;19!UBERON:0002423;1.17e-18;25!UBERON:0002365;1.20e-15;31!UBERON:0002330;1.20e-15;31!UBERON:0002368;1.26e-12;33!UBERON:0000949;1.27e-10;43!UBERON:0005172;7.07e-08;52!UBERON:0005173;7.07e-08;52 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.38e-24;19!UBERON:0006925;2.38e-24;19!UBERON:0002423;1.17e-18;25!UBERON:0002365;1.20e-15;31!UBERON:0002330;1.20e-15;31!UBERON:0002368;1.26e-12;33!UBERON:0000949;1.27e-10;43!UBERON:0005172;7.07e-08;52!UBERON:0005173;7.07e-08;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.31e-24,19;UBERON:0006925,2.31e-24,19;UBERON:0008836,2.31e-24,19;UBERON:0008835,3.95e-21,22;UBERON:0003894,3.95e-21,22;UBERON:0009854,3.07e-20,23;UBERON:0007499,1.14e-18,25;UBERON:0009497,1.14e-18,25;UBERON:0000015,1.14e-18,25;UBERON:0002423,1.14e-18,25;UBERON:0006235,1.14e-18,25;UBERON:0004161,1.14e-18,25;UBERON:0009856,5.65e-18,26;UBERON:0002365,3.61e-15,31;UBERON:0002330,3.61e-15,31;UBERON:0002368,1.69e-13,35;UBERON:0000949,1.30e-10,45;UBERON:0003929,6.41e-09,54;UBERON:0005172,6.41e-09,54;UBERON:0005173,6.41e-09,54;UBERON:0002530,3.36e-08,59;UBERON:0002417,4.53e-08,60;UBERON:0000916,4.53e-08,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,7.60530208930985,1.96565443335525,7.68026878685825,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.671624264166535,0,0,0,0,0.325378394664303,4.12164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44773882019626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0.260427761085233,0.0874599999961957,0,0.341380344856499,0.254253650292766,0,0,0,0,0,0,0,0,0.886642856860642,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.394028536495991,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,7.91382061861645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0.111231401892069,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244209805832924,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,7.60530208930985,1.96565443335525,7.68026878685825,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.671624264166535,0,0,0,0,0.325378394664303,4.12164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44773882019626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0.260427761085233,0.0874599999961957,0,0.341380344856499,0.254253650292766,0,0,0,0,0,0,0,0,0.886642856860642,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.394028536495991,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,7.91382061861645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0.111231401892069,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244209805832924,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr11:66494894..66494908,- | |short_description=p@chr11:66494894..66494908,- | ||
}} | }} |
Revision as of 13:59, 19 November 2012
Short description: | p@chr11:66494894..66494908, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:66494894..66494908, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.33e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.31e-24 | 19 |
digestive gland | 2.31e-24 | 19 |
liver bud | 2.31e-24 | 19 |
hepatic diverticulum | 3.95e-21 | 22 |
liver primordium | 3.95e-21 | 22 |
digestive tract diverticulum | 3.07e-20 | 23 |
epithelial sac | 1.14e-18 | 25 |
epithelium of foregut-midgut junction | 1.14e-18 | 25 |
anatomical boundary | 1.14e-18 | 25 |
hepatobiliary system | 1.14e-18 | 25 |
foregut-midgut junction | 1.14e-18 | 25 |
septum transversum | 1.14e-18 | 25 |
sac | 5.65e-18 | 26 |
exocrine gland | 3.61e-15 | 31 |
exocrine system | 3.61e-15 | 31 |
endocrine gland | 1.69e-13 | 35 |
endocrine system | 1.30e-10 | 45 |
gut epithelium | 6.41e-09 | 54 |
abdomen element | 6.41e-09 | 54 |
abdominal segment element | 6.41e-09 | 54 |
gland | 3.36e-08 | 59 |
abdominal segment of trunk | 4.53e-08 | 60 |
abdomen | 4.53e-08 | 60 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.