FFCP PHASE1:Hg19::chr8:123580995..123581003,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002582!3.79e-11!3;CL:0002591!1.89e-09!1;CL:0002574!1.07e-08!1;CL:0002537!4.16e-07!5 | |ontology_enrichment_celltype=CL:0002582!3.79e-11!3;CL:0002591!1.89e-09!1;CL:0002574!1.07e-08!1;CL:0002537!4.16e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002591;5.12e-50;1!CL:0000322;6.76e-18;3!CL:0002149;1.50e-09;6!CL:0002255;1.50e-09;6!CL:0002202;7.48e-07;9!CL:0002632;7.48e-07;9 | |ontology_enrichment_celltype_v019=CL:0002591;5.12e-50;1!CL:0000322;6.76e-18;3!CL:0002149;1.50e-09;6!CL:0002255;1.50e-09;6!CL:0002202;7.48e-07;9!CL:0002632;7.48e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002591,3.99e-50,1;CL:0000322,6.76e-18,3;CL:0002149,1.57e-09,6;CL:0002255,1.57e-09,6;CL:0002202,7.48e-07,9;CL:0002632,7.48e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;4.32e-26;2!DOID:3908;2.66e-11;5!DOID:1115;5.85e-11;20!DOID:3001;1.50e-09;6!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |ontology_enrichment_disease_v019=DOID:3910;4.32e-26;2!DOID:3908;2.66e-11;5!DOID:1115;5.85e-11;20!DOID:3001;1.50e-09;6!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,4.32e-26,2;DOID:3908,2.66e-11,5;DOID:1115,6.00e-11,20;DOID:3001,1.57e-09,6;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;4.32e-26;2!UBERON:0002173;4.32e-26;2!UBERON:0002186;4.32e-26;2!UBERON:0000078;8.10e-26;2!UBERON:0002012;8.10e-26;2!UBERON:0008886;8.10e-26;2!UBERON:0004821;6.76e-18;3!UBERON:0007499;6.76e-18;3!UBERON:0003215;6.76e-18;3!UBERON:0010368;6.76e-18;3!UBERON:0009911;6.76e-18;3!UBERON:0002299;6.76e-18;3!UBERON:0006524;6.76e-18;3!UBERON:0008874;6.76e-18;3!UBERON:0002169;6.76e-18;3!UBERON:0004894;6.76e-18;3!UBERON:0009856;8.82e-14;4 | |ontology_enrichment_uberon_v019=UBERON:0004903;4.32e-26;2!UBERON:0002173;4.32e-26;2!UBERON:0002186;4.32e-26;2!UBERON:0000078;8.10e-26;2!UBERON:0002012;8.10e-26;2!UBERON:0008886;8.10e-26;2!UBERON:0004821;6.76e-18;3!UBERON:0007499;6.76e-18;3!UBERON:0003215;6.76e-18;3!UBERON:0010368;6.76e-18;3!UBERON:0009911;6.76e-18;3!UBERON:0002299;6.76e-18;3!UBERON:0006524;6.76e-18;3!UBERON:0008874;6.76e-18;3!UBERON:0002169;6.76e-18;3!UBERON:0004894;6.76e-18;3!UBERON:0009856;8.82e-14;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,4.32e-26,2;UBERON:0002173,4.32e-26,2;UBERON:0002186,4.32e-26,2;UBERON:0000078,7.14e-26,2;UBERON:0007497,7.14e-26,2;UBERON:0003643,7.14e-26,2;UBERON:0003504,7.14e-26,2;UBERON:0003469,7.14e-26,2;UBERON:0003496,7.14e-26,2;UBERON:0002012,7.14e-26,2;UBERON:0008886,7.14e-26,2;UBERON:0007303,7.14e-26,2;UBERON:0002061,7.14e-26,2;UBERON:0005432,7.14e-26,2;UBERON:0004363,7.14e-26,2;UBERON:0004821,6.76e-18,3;UBERON:0003215,6.76e-18,3;UBERON:0010368,6.76e-18,3;UBERON:0009911,6.76e-18,3;UBERON:0002299,6.76e-18,3;UBERON:0006524,6.76e-18,3;UBERON:0008874,6.76e-18,3;UBERON:0002169,6.76e-18,3;UBERON:0004894,6.76e-18,3;UBERON:0004145,9.46e-18,3;UBERON:0003498,3.26e-11,5;UBERON:0005985,3.26e-11,5;UBERON:0010188,1.44e-09,6;UBERON:0002539,1.44e-09,6;UBERON:0003351,1.44e-09,6;UBERON:0008816,1.44e-09,6;UBERON:0004807,3.78e-08,28;UBERON:0000485,8.37e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532685175939381,0.0821271560138091,0,0.464841513839837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.52408440419239,0.23874448473769,0,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10939738410511,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23737241392301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532685175939381,0.0821271560138091,0,0.464841513839837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.52408440419239,0.23874448473769,0,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10939738410511,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23737241392301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:123580995..123581003,- | |short_description=p@chr8:123580995..123581003,- | ||
}} | }} |
Revision as of 00:26, 19 November 2012
Short description: | p@chr8:123580995..123581003, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:123580995..123581003, - |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 3.99e-50 | 1 |
pneumocyte | 6.76e-18 | 3 |
epithelial cell of uterus | 1.57e-09 | 6 |
stromal cell of endometrium | 1.57e-09 | 6 |
epithelial cell of tracheobronchial tree | 7.48e-07 | 9 |
epithelial cell of lower respiratory tract | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 4.32e-26 | 2 |
alveolar duct | 4.32e-26 | 2 |
bronchiole | 4.32e-26 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 7.14e-26 | 2 |
developing epithelial placode | 7.14e-26 | 2 |
respiratory system arterial blood vessel | 7.14e-26 | 2 |
respiratory system blood vessel | 7.14e-26 | 2 |
respiratory system artery | 7.14e-26 | 2 |
head blood vessel | 7.14e-26 | 2 |
pulmonary artery | 7.14e-26 | 2 |
pulmonary vascular system | 7.14e-26 | 2 |
pharyngeal vasculature | 7.14e-26 | 2 |
truncus arteriosus | 7.14e-26 | 2 |
aortic sac | 7.14e-26 | 2 |
pharyngeal arch artery | 7.14e-26 | 2 |
pulmonary alveolus epithelium | 6.76e-18 | 3 |
alveolus | 6.76e-18 | 3 |
pulmonary lobule | 6.76e-18 | 3 |
lobule | 6.76e-18 | 3 |
alveolus of lung | 6.76e-18 | 3 |
alveolar system | 6.76e-18 | 3 |
pulmonary acinus | 6.76e-18 | 3 |
alveolar sac | 6.76e-18 | 3 |
alveolar wall | 6.76e-18 | 3 |
outflow tract | 9.46e-18 | 3 |
heart blood vessel | 3.26e-11 | 5 |
coronary vessel | 3.26e-11 | 5 |
protuberance | 1.44e-09 | 6 |
pharyngeal arch | 1.44e-09 | 6 |
pharyngeal epithelium | 1.44e-09 | 6 |
embryonic head | 1.44e-09 | 6 |
respiratory system epithelium | 3.78e-08 | 28 |
simple columnar epithelium | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 4.32e-26 | 2 |
non-small cell lung carcinoma | 2.66e-11 | 5 |
sarcoma | 6.00e-11 | 20 |
female reproductive endometrioid cancer | 1.57e-09 | 6 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.