FFCP PHASE1:Hg19::chr7:45026177..45026188,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000037!1.27e-17!172;CL:0000566!1.27e-17!172;CL:0000988!4.02e-17!182;CL:0002032!2.49e-16!165;CL:0000837!2.49e-16!165;CL:0000063!2.26e-13!578;CL:0000012!4.18e-13!682;CL:0000548!2.95e-12!679;CL:0000004!2.95e-12!679;CL:0000255!2.95e-12!679;CL:0000738!5.90e-12!140;CL:0000860!2.62e-11!45;CL:0000763!2.91e-11!112;CL:0000049!2.91e-11!112;CL:0000003!7.06e-11!722;CL:0002087!1.03e-10!119;CL:0002057!6.06e-10!42;CL:0002031!1.27e-09!124 | |ontology_enrichment_celltype=CL:0000037!1.27e-17!172;CL:0000566!1.27e-17!172;CL:0000988!4.02e-17!182;CL:0002032!2.49e-16!165;CL:0000837!2.49e-16!165;CL:0000063!2.26e-13!578;CL:0000012!4.18e-13!682;CL:0000548!2.95e-12!679;CL:0000004!2.95e-12!679;CL:0000255!2.95e-12!679;CL:0000738!5.90e-12!140;CL:0000860!2.62e-11!45;CL:0000763!2.91e-11!112;CL:0000049!2.91e-11!112;CL:0000003!7.06e-11!722;CL:0002087!1.03e-10!119;CL:0002057!6.06e-10!42;CL:0002031!1.27e-09!124 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.26e-21,177;CL:0000037,1.53e-20,168;CL:0002032,8.03e-19,161;CL:0000837,8.03e-19,161;CL:0000738,1.07e-12,136;CL:0000763,5.93e-11,108;CL:0000049,5.93e-11,108;CL:0002087,8.83e-10,115;CL:0002031,1.32e-08,120;CL:0000542,3.42e-08,53;CL:0000051,3.42e-08,53;CL:0000838,6.80e-08,52;CL:0000453,8.29e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!8.76e-31!235;DOID:14566!5.97e-30!239;DOID:0050686!5.44e-18!137;DOID:2531!2.84e-15!51;DOID:0060083!2.84e-15!51;DOID:0050687!1.17e-13!143;DOID:305!1.82e-12!106;DOID:1240!1.64e-11!39;DOID:8692!9.52e-08!31;DOID:0060058!6.80e-07!10 | |ontology_enrichment_disease=DOID:162!8.76e-31!235;DOID:14566!5.97e-30!239;DOID:0050686!5.44e-18!137;DOID:2531!2.84e-15!51;DOID:0060083!2.84e-15!51;DOID:0050687!1.17e-13!143;DOID:305!1.82e-12!106;DOID:1240!1.64e-11!39;DOID:8692!9.52e-08!31;DOID:0060058!6.80e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:2531;2.27e-12;51!DOID:0060083;2.27e-12;51!DOID:1240;2.69e-12;39!DOID:0060058;3.64e-10;10!DOID:8692;1.58e-09;31!DOID:1749;7.24e-09;14 | |ontology_enrichment_disease_v019=DOID:2531;2.27e-12;51!DOID:0060083;2.27e-12;51!DOID:1240;2.69e-12;39!DOID:0060058;3.64e-10;10!DOID:8692;1.58e-09;31!DOID:1749;7.24e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:14566,1.43e-28,239;DOID:162,1.86e-28,235;DOID:2531,8.53e-21,51;DOID:0060083,8.53e-21,51;DOID:0050686,7.13e-16,137;DOID:1240,9.75e-16,39;DOID:305,1.38e-14,106;DOID:0050687,6.87e-12,143;DOID:0060058,3.27e-10,10;DOID:8692,6.81e-10,31;DOID:1749,1.86e-08,14 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.94e-07;9!UBERON:0001557;5.94e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;5.94e-07;9!UBERON:0001557;5.94e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.79e-07,9 | |||
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| ||
|short_description=p2@SNHG15 | |short_description=p2@SNHG15 | ||
}} | }} |
Revision as of 22:19, 18 November 2012
Short description: | p2@SNHG15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SNHG15_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | 47bp_to_uc003tmk.3_5end |
EntrezGene: | SNHG15 |
HGNC: | 27797 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.26e-21 | 177 |
hematopoietic stem cell | 1.53e-20 | 168 |
hematopoietic oligopotent progenitor cell | 8.03e-19 | 161 |
hematopoietic multipotent progenitor cell | 8.03e-19 | 161 |
leukocyte | 1.07e-12 | 136 |
myeloid cell | 5.93e-11 | 108 |
common myeloid progenitor | 5.93e-11 | 108 |
nongranular leukocyte | 8.83e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.32e-08 | 120 |
lymphocyte | 3.42e-08 | 53 |
common lymphoid progenitor | 3.42e-08 | 53 |
lymphoid lineage restricted progenitor cell | 6.80e-08 | 52 |
Langerhans cell | 8.29e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.79e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.43e-28 | 239 |
cancer | 1.86e-28 | 235 |
hematologic cancer | 8.53e-21 | 51 |
immune system cancer | 8.53e-21 | 51 |
organ system cancer | 7.13e-16 | 137 |
leukemia | 9.75e-16 | 39 |
carcinoma | 1.38e-14 | 106 |
cell type cancer | 6.87e-12 | 143 |
lymphoma | 3.27e-10 | 10 |
myeloid leukemia | 6.81e-10 | 31 |
squamous cell carcinoma | 1.86e-08 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.