FFCP PHASE1:Hg19::chr14:55590646..55590689,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002009!3.66e-46!65;CL:0002194!6.98e-45!63;CL:0000576!6.98e-45!63;CL:0000040!6.98e-45!63;CL:0000559!6.98e-45!63;CL:0000557!7.82e-44!71;CL:0000766!2.24e-42!76;CL:0000839!8.52e-42!70;CL:0002057!1.20e-29!42;CL:0000860!3.21e-27!45;CL:0000763!3.44e-27!112;CL:0000049!3.44e-27!112;CL:0000738!3.21e-22!140;CL:0002087!5.51e-22!119;CL:0002031!8.84e-21!124;CL:0000037!4.49e-16!172;CL:0000566!4.49e-16!172;CL:0002032!4.08e-15!165;CL:0000837!4.08e-15!165;CL:0000988!1.31e-14!182;CL:0002619!1.21e-08!3;CL:0000840!2.02e-08!5;CL:0001029!2.02e-08!5;CL:0000235!7.11e-07!10 | |ontology_enrichment_celltype=CL:0002009!3.66e-46!65;CL:0002194!6.98e-45!63;CL:0000576!6.98e-45!63;CL:0000040!6.98e-45!63;CL:0000559!6.98e-45!63;CL:0000557!7.82e-44!71;CL:0000766!2.24e-42!76;CL:0000839!8.52e-42!70;CL:0002057!1.20e-29!42;CL:0000860!3.21e-27!45;CL:0000763!3.44e-27!112;CL:0000049!3.44e-27!112;CL:0000738!3.21e-22!140;CL:0002087!5.51e-22!119;CL:0002031!8.84e-21!124;CL:0000037!4.49e-16!172;CL:0000566!4.49e-16!172;CL:0002032!4.08e-15!165;CL:0000837!4.08e-15!165;CL:0000988!1.31e-14!182;CL:0002619!1.21e-08!3;CL:0000840!2.02e-08!5;CL:0001029!2.02e-08!5;CL:0000235!7.11e-07!10 | ||
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|ontology_enrichment_development_v019=UBERON:0000358;6.76e-11;1 | |ontology_enrichment_development_v019=UBERON:0000358;6.76e-11;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.25e-16,14;UBERON:0000158,1.25e-16,14;UBERON:0000478,1.13e-13,24;UBERON:0003124,1.26e-12,7;UBERON:0002171,6.14e-11,1;UBERON:0006518,6.14e-11,1;UBERON:0008949,6.14e-11,1;UBERON:0000101,6.14e-11,1;UBERON:0002167,6.14e-11,1;UBERON:0001987,2.05e-10,4;UBERON:0004340,2.05e-10,4;UBERON:0003081,2.21e-09,203;UBERON:0002371,7.48e-09,76;UBERON:0001474,4.02e-08,82;UBERON:0004765,2.68e-07,90;UBERON:0002405,5.02e-07,93 | |||
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| ||
|short_description=p2@LGALS3 | |short_description=p2@LGALS3 | ||
}} | }} |
Revision as of 21:39, 18 November 2012
Short description: | p2@LGALS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LGALS3_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | -138bp_to_ENST00000553493_5end |
EntrezGene: | LGALS3 |
HGNC: | 6563 |
UniProt: | G3V407 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 1.75e-26 | 5 |
common dendritic progenitor | 1.75e-26 | 5 |
conventional dendritic cell | 9.39e-18 | 8 |
macrophage | 6.73e-15 | 6 |
dendritic cell | 1.44e-14 | 10 |
placental epithelial cell | 1.41e-13 | 3 |
extraembryonic cell | 3.10e-12 | 19 |
macrophage dendritic cell progenitor | 2.70e-11 | 61 |
granulocyte monocyte progenitor cell | 3.45e-10 | 67 |
monopoietic cell | 3.06e-09 | 59 |
monocyte | 3.06e-09 | 59 |
monoblast | 3.06e-09 | 59 |
promonocyte | 3.06e-09 | 59 |
myeloid lineage restricted progenitor cell | 3.59e-08 | 66 |
myeloid leukocyte | 2.04e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.25e-16 | 14 |
membranous layer | 1.25e-16 | 14 |
extraembryonic structure | 1.13e-13 | 24 |
chorion | 1.26e-12 | 7 |
lower lobe of right lung | 6.14e-11 | 1 |
right lung lobe | 6.14e-11 | 1 |
lower lobe of lung | 6.14e-11 | 1 |
lobe of lung | 6.14e-11 | 1 |
right lung | 6.14e-11 | 1 |
placenta | 2.05e-10 | 4 |
allantois | 2.05e-10 | 4 |
lateral plate mesoderm | 2.21e-09 | 203 |
bone marrow | 7.48e-09 | 76 |
bone element | 4.02e-08 | 82 |
skeletal element | 2.68e-07 | 90 |
immune system | 5.02e-07 | 93 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.