FFCP PHASE1:Hg19::chr12:7727849..7727866,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002619!1.03e-15!3 | |ontology_enrichment_celltype=CL:0002619!1.03e-15!3 | ||
|ontology_enrichment_celltype_v019=CL:0002619;1.73e-117;3!CL:0000115;4.17e-10;36!CL:0000576;1.90e-08;48!CL:0002078;3.65e-07;45 | |ontology_enrichment_celltype_v019=CL:0002619;1.73e-117;3!CL:0000115;4.17e-10;36!CL:0000576;1.90e-08;48!CL:0002078;3.65e-07;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0002619,1.16e-117,3;CL:0000115,1.05e-10,36;CL:0002078,1.01e-08,45;CL:0000213,6.27e-07,58;CL:0000215,6.27e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.14e-23;7 | |ontology_enrichment_development_v019=UBERON:0004872;1.14e-23;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.04e-26!115;UBERON:0002780!2.94e-18!41;UBERON:0001890!2.94e-18!41;UBERON:0006240!2.94e-18!41;UBERON:0003080!9.20e-18!42;UBERON:0001049!2.03e-14!57;UBERON:0005068!2.03e-14!57;UBERON:0006241!2.03e-14!57;UBERON:0007135!2.03e-14!57;UBERON:0002791!5.96e-14!33;UBERON:0002616!7.90e-14!59;UBERON:0001893!1.72e-13!34;UBERON:0000955!7.70e-13!69;UBERON:0006238!7.70e-13!69;UBERON:0001017!7.32e-12!82;UBERON:0003056!2.17e-11!61;UBERON:0002020!3.64e-11!34;UBERON:0003528!3.64e-11!34;UBERON:0005743!3.75e-11!86;UBERON:0001875!1.31e-10!2;UBERON:0006514!1.31e-10!2;UBERON:0000073!8.98e-10!94;UBERON:0001016!8.98e-10!94;UBERON:0001869!1.11e-09!32;UBERON:0002619!9.51e-09!22;UBERON:0003075!1.54e-08!86;UBERON:0007284!1.54e-08!86;UBERON:0002346!5.02e-08!90;UBERON:0002106!1.18e-07!3;UBERON:0004854!1.18e-07!3;UBERON:0009034!1.18e-07!3;UBERON:0002095!1.18e-07!3;UBERON:0004782!1.18e-07!3;UBERON:0003281!1.18e-07!3;UBERON:0009664!1.18e-07!3;UBERON:0002296!1.18e-07!3;UBERON:0005602!1.18e-07!3;UBERON:0001179!1.18e-07!3;UBERON:0006293!1.18e-07!3;UBERON:0000956!1.24e-07!25;UBERON:0000203!1.24e-07!25;UBERON:0001950!3.13e-07!20;UBERON:0000153!3.39e-07!129;UBERON:0007811!3.39e-07!129;UBERON:0002771!5.12e-07!3;UBERON:0004177!7.97e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!1.04e-26!115;UBERON:0002780!2.94e-18!41;UBERON:0001890!2.94e-18!41;UBERON:0006240!2.94e-18!41;UBERON:0003080!9.20e-18!42;UBERON:0001049!2.03e-14!57;UBERON:0005068!2.03e-14!57;UBERON:0006241!2.03e-14!57;UBERON:0007135!2.03e-14!57;UBERON:0002791!5.96e-14!33;UBERON:0002616!7.90e-14!59;UBERON:0001893!1.72e-13!34;UBERON:0000955!7.70e-13!69;UBERON:0006238!7.70e-13!69;UBERON:0001017!7.32e-12!82;UBERON:0003056!2.17e-11!61;UBERON:0002020!3.64e-11!34;UBERON:0003528!3.64e-11!34;UBERON:0005743!3.75e-11!86;UBERON:0001875!1.31e-10!2;UBERON:0006514!1.31e-10!2;UBERON:0000073!8.98e-10!94;UBERON:0001016!8.98e-10!94;UBERON:0001869!1.11e-09!32;UBERON:0002619!9.51e-09!22;UBERON:0003075!1.54e-08!86;UBERON:0007284!1.54e-08!86;UBERON:0002346!5.02e-08!90;UBERON:0002106!1.18e-07!3;UBERON:0004854!1.18e-07!3;UBERON:0009034!1.18e-07!3;UBERON:0002095!1.18e-07!3;UBERON:0004782!1.18e-07!3;UBERON:0003281!1.18e-07!3;UBERON:0009664!1.18e-07!3;UBERON:0002296!1.18e-07!3;UBERON:0005602!1.18e-07!3;UBERON:0001179!1.18e-07!3;UBERON:0006293!1.18e-07!3;UBERON:0000956!1.24e-07!25;UBERON:0000203!1.24e-07!25;UBERON:0001950!3.13e-07!20;UBERON:0000153!3.39e-07!129;UBERON:0007811!3.39e-07!129;UBERON:0002771!5.12e-07!3;UBERON:0004177!7.97e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.68e-53;3!UBERON:0004177;1.23e-32;5!UBERON:0005057;1.23e-32;5!UBERON:0002075;7.10e-10;18!UBERON:0000077;6.62e-07;27!UBERON:0002405;6.62e-07;27 | |ontology_enrichment_uberon_v019=UBERON:0002106;1.68e-53;3!UBERON:0004177;1.23e-32;5!UBERON:0005057;1.23e-32;5!UBERON:0002075;7.10e-10;18!UBERON:0000077;6.62e-07;27!UBERON:0002405;6.62e-07;27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.19e-53,3;UBERON:0004854,2.19e-53,3;UBERON:0009034,2.19e-53,3;UBERON:0002095,2.19e-53,3;UBERON:0004782,2.19e-53,3;UBERON:0003281,2.19e-53,3;UBERON:0009664,2.19e-53,3;UBERON:0002296,2.19e-53,3;UBERON:0005602,2.19e-53,3;UBERON:0001179,2.19e-53,3;UBERON:0006293,2.19e-53,3;UBERON:0004177,1.28e-23,7;UBERON:0005057,1.28e-23,7;UBERON:0000945,8.12e-21,8;UBERON:0010039,8.12e-21,8;UBERON:0004457,2.94e-14,12;UBERON:0000042,2.94e-14,12;UBERON:0003887,2.94e-14,12;UBERON:0002405,3.61e-11,93;UBERON:0002390,1.23e-10,98;UBERON:0003061,1.23e-10,98;UBERON:0002075,7.42e-10,18;UBERON:0002193,1.03e-09,108;UBERON:0005409,4.02e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80656306207871,1.6194683300949,4.89393578504954,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0.53746777989381,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0.672567444437648,0,0.91064876540519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,4.41724414505312,4.76988371004471,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.248298857183432,0,0,0,0,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80656306207871,1.6194683300949,4.89393578504954,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0.53746777989381,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0.672567444437648,0,0.91064876540519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,4.41724414505312,4.76988371004471,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.248298857183432,0,0,0,0,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:7727849..7727866,- | |short_description=p@chr12:7727849..7727866,- | ||
}} | }} |
Revision as of 11:17, 18 November 2012
Short description: | p@chr12:7727849..7727866, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:7727849..7727866, - |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 1.16e-117 | 3 |
endothelial cell | 1.05e-10 | 36 |
meso-epithelial cell | 1.01e-08 | 45 |
lining cell | 6.27e-07 | 58 |
barrier cell | 6.27e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.19e-53 | 3 |
gastrointestinal system mesentery | 2.19e-53 | 3 |
stomach region | 2.19e-53 | 3 |
mesentery | 2.19e-53 | 3 |
gastrointestinal system serosa | 2.19e-53 | 3 |
mesentery of stomach | 2.19e-53 | 3 |
gut mesentery | 2.19e-53 | 3 |
dorsal mesentery | 2.19e-53 | 3 |
dorsal mesogastrium | 2.19e-53 | 3 |
peritoneal cavity | 2.19e-53 | 3 |
spleen primordium | 2.19e-53 | 3 |
hemopoietic organ | 1.28e-23 | 7 |
immune organ | 1.28e-23 | 7 |
stomach | 8.12e-21 | 8 |
food storage organ | 8.12e-21 | 8 |
cavity lining | 2.94e-14 | 12 |
serous membrane | 2.94e-14 | 12 |
intraembryonic coelom | 2.94e-14 | 12 |
immune system | 3.61e-11 | 93 |
hematopoietic system | 1.23e-10 | 98 |
blood island | 1.23e-10 | 98 |
viscus | 7.42e-10 | 18 |
hemolymphoid system | 1.03e-09 | 108 |
gastrointestinal system | 4.02e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.