FFCP PHASE1:Hg19::chr1:53608270..53608288,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000306;1.70e-09;4!CL:0002222;1.70e-09;4!CL:0002224;1.70e-09;4!CL:0000243;8.55e-09;15!CL:0000125;8.55e-09;15!CL:0000095;5.73e-08;17 | |ontology_enrichment_celltype_v019=CL:0000306;1.70e-09;4!CL:0002222;1.70e-09;4!CL:0002224;1.70e-09;4!CL:0000243;8.55e-09;15!CL:0000125;8.55e-09;15!CL:0000095;5.73e-08;17 | ||
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|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;4.80e-12;11!DOID:5409;1.44e-09;4 | |ontology_enrichment_disease_v019=DOID:3093;4.80e-12;11!DOID:5409;1.44e-09;4 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,4.80e-12,11;DOID:5409,1.44e-09,4 | |||
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|short_description=p3@SLC1A7 | |short_description=p3@SLC1A7 | ||
}} | }} |
Revision as of 08:46, 18 November 2012
Short description: | p3@SLC1A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SLC1A7_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | 0bp_to_ENST00000371491, NM_006671, uc001cuy.2, uc001cuz.3_5end |
EntrezGene: | SLC1A7 |
HGNC: | 10945 |
UniProt: | Q9BW45O00341 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.70e-09 | 4 |
vertebrate lens cell | 1.70e-09 | 4 |
lens epithelial cell | 1.70e-09 | 4 |
glial cell (sensu Vertebrata) | 8.55e-09 | 15 |
glial cell | 8.55e-09 | 15 |
glioblast | 8.55e-09 | 15 |
glioblast (sensu Vertebrata) | 8.55e-09 | 15 |
neuron associated cell | 5.73e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 5.73e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
eye | 1.12e-25 | 21 |
visual system | 1.12e-25 | 21 |
retina | 4.34e-23 | 6 |
photoreceptor array | 4.34e-23 | 6 |
posterior segment of eyeball | 4.34e-23 | 6 |
sense organ | 1.46e-22 | 24 |
sensory system | 1.46e-22 | 24 |
entire sense organ system | 1.46e-22 | 24 |
camera-type eye | 1.29e-15 | 20 |
simple eye | 1.29e-15 | 20 |
immature eye | 1.29e-15 | 20 |
ocular region | 1.29e-15 | 20 |
eyeball of camera-type eye | 1.29e-15 | 20 |
optic cup | 1.29e-15 | 20 |
optic vesicle | 1.29e-15 | 20 |
eye primordium | 1.29e-15 | 20 |
face | 2.85e-14 | 22 |
ectodermal placode | 2.36e-10 | 31 |
cuboidal epithelium | 1.70e-09 | 4 |
transparent eye structure | 1.70e-09 | 4 |
simple cuboidal epithelium | 1.70e-09 | 4 |
cranial placode | 1.70e-09 | 4 |
lens of camera-type eye | 1.70e-09 | 4 |
epithelium of lens | 1.70e-09 | 4 |
lens placode | 1.70e-09 | 4 |
lens vesicle | 1.70e-09 | 4 |
subdivision of head | 8.40e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 4.80e-12 | 11 |
lung small cell carcinoma | 1.44e-09 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.