FFCP PHASE1:Hg19::chr1:94586634..94586639,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.62e-23;3 | |ontology_enrichment_development_v019=UBERON:0003056;2.62e-23;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!1.81e-54!3;UBERON:0005290!1.81e-54!3;UBERON:0010096!1.81e-54!3;UBERON:0002298!5.91e-21!8;UBERON:0001301!2.25e-19!1;UBERON:0001882!2.71e-19!1;UBERON:0005403!2.71e-19!1;UBERON:0004733!3.30e-14!12;UBERON:0002028!3.30e-14!12;UBERON:0007277!3.30e-14!12;UBERON:0004732!3.63e-13!13;UBERON:0003076!1.70e-11!15;UBERON:0003057!1.70e-11!15;UBERON:0001049!7.67e-08!57;UBERON:0005068!7.67e-08!57;UBERON:0006241!7.67e-08!57;UBERON:0007135!7.67e-08!57;UBERON:0002616!1.40e-07!59;UBERON:0007023!2.30e-07!115;UBERON:0006947!2.47e-07!3;UBERON:0004054!2.47e-07!3;UBERON:0003075!2.48e-07!86;UBERON:0007284!2.48e-07!86;UBERON:0005743!3.02e-07!86;UBERON:0002346!5.33e-07!90 | |ontology_enrichment_uberon=UBERON:0001896!1.81e-54!3;UBERON:0005290!1.81e-54!3;UBERON:0010096!1.81e-54!3;UBERON:0002298!5.91e-21!8;UBERON:0001301!2.25e-19!1;UBERON:0001882!2.71e-19!1;UBERON:0005403!2.71e-19!1;UBERON:0004733!3.30e-14!12;UBERON:0002028!3.30e-14!12;UBERON:0007277!3.30e-14!12;UBERON:0004732!3.63e-13!13;UBERON:0003076!1.70e-11!15;UBERON:0003057!1.70e-11!15;UBERON:0001049!7.67e-08!57;UBERON:0005068!7.67e-08!57;UBERON:0006241!7.67e-08!57;UBERON:0007135!7.67e-08!57;UBERON:0002616!1.40e-07!59;UBERON:0007023!2.30e-07!115;UBERON:0006947!2.47e-07!3;UBERON:0004054!2.47e-07!3;UBERON:0003075!2.48e-07!86;UBERON:0007284!2.48e-07!86;UBERON:0005743!3.02e-07!86;UBERON:0002346!5.33e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;4.09e-23;3!UBERON:0005290;4.09e-23;3!UBERON:0000966;1.40e-14;5!UBERON:0005388;1.40e-14;5!UBERON:0001802;1.40e-14;5!UBERON:0000970;2.41e-14;20!UBERON:0002104;1.02e-13;21!UBERON:0000020;1.25e-12;23!UBERON:0002298;2.74e-12;6!UBERON:0001032;3.75e-12;24!UBERON:0004456;3.75e-12;24!UBERON:0004733;8.38e-07;12!UBERON:0002028;8.38e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0001896;4.09e-23;3!UBERON:0005290;4.09e-23;3!UBERON:0000966;1.40e-14;5!UBERON:0005388;1.40e-14;5!UBERON:0001802;1.40e-14;5!UBERON:0000970;2.41e-14;20!UBERON:0002104;1.02e-13;21!UBERON:0000020;1.25e-12;23!UBERON:0002298;2.74e-12;6!UBERON:0001032;3.75e-12;24!UBERON:0004456;3.75e-12;24!UBERON:0004733;8.38e-07;12!UBERON:0002028;8.38e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,4.09e-23,3;UBERON:0005290,4.09e-23,3;UBERON:0010096,4.09e-23,3;UBERON:0000970,1.02e-13,21;UBERON:0002104,1.02e-13,21;UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6;UBERON:0002298,2.74e-12,6;UBERON:0000020,3.75e-12,24;UBERON:0001032,3.75e-12,24;UBERON:0004456,3.75e-12,24;UBERON:0004733,8.38e-07,12;UBERON:0002028,8.38e-07,12;UBERON:0007277,8.38e-07,12 | |||
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|short_description=p5@ABCA4 | |short_description=p5@ABCA4 | ||
}} | }} |
Revision as of 04:55, 18 November 2012
Short description: | p5@ABCA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ABCA4_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 41bp_to_ENST00000535735_5end |
EntrezGene: | ABCA4 |
HGNC: | 34 |
UniProt: | F5H6E5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 4.09e-23 | 3 |
myelencephalon | 4.09e-23 | 3 |
future myelencephalon | 4.09e-23 | 3 |
eye | 1.02e-13 | 21 |
visual system | 1.02e-13 | 21 |
retina | 2.19e-12 | 6 |
photoreceptor array | 2.19e-12 | 6 |
posterior segment of eyeball | 2.19e-12 | 6 |
brainstem | 2.74e-12 | 6 |
sense organ | 3.75e-12 | 24 |
sensory system | 3.75e-12 | 24 |
entire sense organ system | 3.75e-12 | 24 |
segmental subdivision of hindbrain | 8.38e-07 | 12 |
hindbrain | 8.38e-07 | 12 |
presumptive hindbrain | 8.38e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.