FFCP PHASE1:Hg19::chr2:175629374..175629385,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002556!1.64e-11!6;CL:0000515!2.89e-10!4;CL:0000055!1.16e-07!180;CL:0002144!6.52e-07!3 | |ontology_enrichment_celltype=CL:0002556!1.64e-11!6;CL:0000515!2.89e-10!4;CL:0000055!1.16e-07!180;CL:0002144!6.52e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002262;2.05e-15;2!CL:1000398;2.05e-15;2!CL:0002582;9.90e-11;3 | |ontology_enrichment_celltype_v019=CL:0002262;2.05e-15;2!CL:1000398;2.05e-15;2!CL:0002582;9.90e-11;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002262,2.05e-15,2;CL:1000398,2.05e-15,2;CL:0002582,1.20e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0009847;9.90e-11;3!UBERON:0003353;9.90e-11;3 | |ontology_enrichment_development_v019=UBERON:0009847;9.90e-11;3!UBERON:0003353;9.90e-11;3 | ||
|ontology_enrichment_disease=DOID:2394!2.05e-07!14 | |ontology_enrichment_disease=DOID:2394!2.05e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3371;9.98e-30;1!DOID:4549;9.98e-30;1!DOID:5861;9.98e-30;1!DOID:6496;9.98e-30;1 | |ontology_enrichment_disease_v019=DOID:3371;9.98e-30;1!DOID:4549;9.98e-30;1!DOID:5861;9.98e-30;1!DOID:6496;9.98e-30;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,9.99e-30,1;DOID:4549,9.99e-30,1;DOID:5861,9.99e-30,1;DOID:6496,9.99e-30,1 | |||
|ontology_enrichment_uberon=UBERON:0001758!1.64e-11!6;UBERON:0003672!1.64e-11!6;UBERON:0002118!3.37e-08!5;UBERON:0004532!3.37e-08!5;UBERON:0001915!6.52e-07!3;UBERON:0001982!6.52e-07!3;UBERON:0000914!8.07e-07!83;UBERON:0002329!8.07e-07!83;UBERON:0003077!8.07e-07!83;UBERON:0003059!8.07e-07!83;UBERON:0007282!8.07e-07!83;UBERON:0009618!8.07e-07!83;UBERON:0007285!8.07e-07!83 | |ontology_enrichment_uberon=UBERON:0001758!1.64e-11!6;UBERON:0003672!1.64e-11!6;UBERON:0002118!3.37e-08!5;UBERON:0004532!3.37e-08!5;UBERON:0001915!6.52e-07!3;UBERON:0001982!6.52e-07!3;UBERON:0000914!8.07e-07!83;UBERON:0002329!8.07e-07!83;UBERON:0003077!8.07e-07!83;UBERON:0003059!8.07e-07!83;UBERON:0007282!8.07e-07!83;UBERON:0009618!8.07e-07!83;UBERON:0007285!8.07e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;2.05e-15;2!UBERON:0003497;2.05e-15;2!UBERON:0003909;2.05e-15;2!UBERON:0003835;2.05e-15;2!UBERON:0002418;7.42e-11;3!UBERON:0004755;7.42e-11;3!UBERON:0001280;9.90e-11;3!UBERON:0004647;9.90e-11;3 | |ontology_enrichment_uberon_v019=UBERON:0001281;2.05e-15;2!UBERON:0003497;2.05e-15;2!UBERON:0003909;2.05e-15;2!UBERON:0003835;2.05e-15;2!UBERON:0002418;7.42e-11;3!UBERON:0004755;7.42e-11;3!UBERON:0001280;9.90e-11;3!UBERON:0004647;9.90e-11;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.05e-15,2;UBERON:0003497,2.05e-15,2;UBERON:0003909,2.05e-15,2;UBERON:0003835,2.05e-15,2;UBERON:0002418,7.42e-11,3;UBERON:0004755,7.42e-11,3;UBERON:0001280,9.90e-11,3;UBERON:0004647,9.90e-11,3;UBERON:0005171,9.90e-11,3 | |||
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|short_description=p5@CHRNA1 | |short_description=p5@CHRNA1 | ||
}} | }} |
Revision as of 17:18, 17 November 2012
Short description: | p5@CHRNA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CHRNA1_5end |
Coexpression cluster: | C315_Osteoblast_Preadipocyte_mesenchymal_Smooth_Cardiac_leiomyoma_Adipocyte |
Association with transcript: | -174bp_to_ENST00000348749, NM_000079, NM_001039523, uc002ujd.2, uc002uje.2, uc002ujf.3_5end |
EntrezGene: | CHRNA1 |
HGNC: | 1955 |
UniProt: | P02708Q53SH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 2.05e-15 | 2 |
endothelial cell of hepatic sinusoid | 2.05e-15 | 2 |
visceral preadipocyte | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.05e-15 | 2 |
abdomen blood vessel | 2.05e-15 | 2 |
sinusoid | 2.05e-15 | 2 |
abdominal segment blood vessel | 2.05e-15 | 2 |
cartilage tissue | 7.42e-11 | 3 |
skeletal tissue | 7.42e-11 | 3 |
liver parenchyma | 9.90e-11 | 3 |
liver lobule | 9.90e-11 | 3 |
hepatic duct | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.99e-30 | 1 |
extraosseous chondrosarcoma | 9.99e-30 | 1 |
myxoid chondrosarcoma | 9.99e-30 | 1 |
extraskeletal myxoid chondrosarcoma | 9.99e-30 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.