FFCP PHASE1:Hg19::chr4:77357318..77357335,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000128!1.49e-13!7;CL:0000126!1.49e-13!7;CL:0000127!1.49e-13!7;CL:0002453!1.49e-13!7;CL:0002319!1.07e-11!25;CL:0000243!2.51e-09!15;CL:0000125!2.51e-09!15;CL:0000030!2.51e-09!15;CL:0000339!2.51e-09!15;CL:0000095!4.41e-08!17;CL:0000123!4.41e-08!17;CL:0000133!2.17e-07!59;CL:0002605!5.02e-07!3;CL:0000064!5.73e-07!3;CL:0005012!5.73e-07!3;CL:0000067!5.73e-07!3;CL:0002304!5.73e-07!3 | |ontology_enrichment_celltype=CL:0000128!1.49e-13!7;CL:0000126!1.49e-13!7;CL:0000127!1.49e-13!7;CL:0002453!1.49e-13!7;CL:0002319!1.07e-11!25;CL:0000243!2.51e-09!15;CL:0000125!2.51e-09!15;CL:0000030!2.51e-09!15;CL:0000339!2.51e-09!15;CL:0000095!4.41e-08!17;CL:0000123!4.41e-08!17;CL:0000133!2.17e-07!59;CL:0002605!5.02e-07!3;CL:0000064!5.73e-07!3;CL:0005012!5.73e-07!3;CL:0000067!5.73e-07!3;CL:0002304!5.73e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000128;3.24e-35;7!CL:0000126;3.24e-35;7!CL:0000127;3.24e-35;7!CL:0002605;3.39e-22;3!CL:0000064;5.98e-22;3!CL:0000067;5.98e-22;3!CL:0005012;5.98e-22;3!CL:0002304;5.98e-22;3!CL:0002319;2.94e-19;25!CL:0000243;3.99e-19;15!CL:0000125;3.99e-19;15!CL:0000095;4.97e-17;17!CL:0002603;6.21e-10;3!CL:0000342;4.56e-08;1!CL:0002565;4.56e-08;1!CL:0000306;7.43e-08;4!CL:0002222;7.43e-08;4!CL:0002224;7.43e-08;4 | |ontology_enrichment_celltype_v019=CL:0000128;3.24e-35;7!CL:0000126;3.24e-35;7!CL:0000127;3.24e-35;7!CL:0002605;3.39e-22;3!CL:0000064;5.98e-22;3!CL:0000067;5.98e-22;3!CL:0005012;5.98e-22;3!CL:0002304;5.98e-22;3!CL:0002319;2.94e-19;25!CL:0000243;3.99e-19;15!CL:0000125;3.99e-19;15!CL:0000095;4.97e-17;17!CL:0002603;6.21e-10;3!CL:0000342;4.56e-08;1!CL:0002565;4.56e-08;1!CL:0000306;7.43e-08;4!CL:0002222;7.43e-08;4!CL:0002224;7.43e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000128,4.37e-35,7;CL:0000126,4.37e-35,7;CL:0000127,4.37e-35,7;CL:0002453,4.37e-35,7;CL:0002605,3.78e-22,3;CL:0000064,6.21e-22,3;CL:0000067,6.21e-22,3;CL:0005012,6.21e-22,3;CL:0002304,6.21e-22,3;CL:0002319,3.05e-19,25;CL:0000243,4.17e-19,15;CL:0000125,4.17e-19,15;CL:0000030,4.17e-19,15;CL:0000339,4.17e-19,15;CL:0000095,5.16e-17,17;CL:0000123,5.16e-17,17;CL:0000133,3.92e-14,59;CL:0000221,2.90e-11,72;CL:0002603,5.68e-10,3;CL:0000342,6.24e-08,1;CL:0002565,6.24e-08,1;CL:0000306,7.97e-08,4;CL:0002222,7.97e-08,4;CL:0002224,7.97e-08,4;CL:0000333,4.62e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000339;3.99e-19;15!CL:0000133;1.39e-09;59!UBERON:0009117;6.91e-07;10!UBERON:0005564;6.91e-07;10 | |ontology_enrichment_development_v019=CL:0000339;3.99e-19;15!CL:0000133;1.39e-09;59!UBERON:0009117;6.91e-07;10!UBERON:0005564;6.91e-07;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;7.83e-15;2!DOID:0050619;4.56e-08;1!DOID:1357;4.56e-08;1 | |ontology_enrichment_disease_v019=DOID:3493;7.83e-15;2!DOID:0050619;4.56e-08;1!DOID:1357;4.56e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,4.47e-15,2;DOID:0050619,5.43e-08,1;DOID:1357,5.43e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005743!9.31e-48!86;UBERON:0003075!9.66e-46!86;UBERON:0007284!9.66e-46!86;UBERON:0002346!5.86e-43!90;UBERON:0001017!1.90e-42!82;UBERON:0000073!1.16e-41!94;UBERON:0001016!1.16e-41!94;UBERON:0001049!1.59e-36!57;UBERON:0005068!1.59e-36!57;UBERON:0006241!1.59e-36!57;UBERON:0007135!1.59e-36!57;UBERON:0000955!1.32e-34!69;UBERON:0006238!1.32e-34!69;UBERON:0000033!8.70e-34!123;UBERON:0002616!8.50e-33!59;UBERON:0000153!8.89e-33!129;UBERON:0007811!8.89e-33!129;UBERON:0003056!2.00e-32!61;UBERON:0004121!3.01e-30!169;UBERON:0000924!4.28e-29!173;UBERON:0006601!4.28e-29!173;UBERON:0002780!2.31e-26!41;UBERON:0001890!2.31e-26!41;UBERON:0006240!2.31e-26!41;UBERON:0002020!2.33e-26!34;UBERON:0003528!2.33e-26!34;UBERON:0001893!2.50e-26!34;UBERON:0001869!3.48e-26!32;UBERON:0003080!1.55e-25!42;UBERON:0002791!6.38e-25!33;UBERON:0000956!5.55e-22!25;UBERON:0000203!5.55e-22!25;UBERON:0007023!6.03e-21!115;UBERON:0002619!2.98e-17!22;UBERON:0001950!5.92e-17!20;UBERON:0007625!7.12e-13!11;UBERON:0003076!4.94e-12!15;UBERON:0003057!4.94e-12!15;UBERON:0004733!1.42e-10!12;UBERON:0002028!1.42e-10!12;UBERON:0007277!1.42e-10!12;UBERON:0001871!2.71e-10!7;UBERON:0004732!1.33e-09!13;UBERON:0000025!1.47e-09!194;UBERON:0000970!4.37e-09!20;UBERON:0002680!5.76e-09!9;UBERON:0001895!5.76e-09!9;UBERON:0010092!5.76e-09!9;UBERON:0000020!5.86e-09!23;UBERON:0001456!1.15e-08!21;UBERON:0000488!1.31e-08!4;UBERON:0002104!1.61e-08!21;UBERON:0001032!1.86e-08!24;UBERON:0004456!1.86e-08!24;UBERON:0000483!2.69e-08!309;UBERON:0000064!3.21e-08!219;UBERON:0000019!3.70e-08!19;UBERON:0000047!3.70e-08!19;UBERON:0004088!3.70e-08!19;UBERON:0003072!3.70e-08!19;UBERON:0003071!3.70e-08!19;UBERON:0004128!3.70e-08!19;UBERON:0000119!4.61e-08!312;UBERON:0000477!6.40e-08!286;UBERON:0000475!2.01e-07!365;UBERON:0000481!2.07e-07!347;UBERON:0000062!2.30e-07!511;UBERON:0004111!3.83e-07!241;UBERON:0000200!5.08e-07!6;UBERON:0001778!5.73e-07!3;UBERON:0001775!5.73e-07!3 | |ontology_enrichment_uberon=UBERON:0005743!9.31e-48!86;UBERON:0003075!9.66e-46!86;UBERON:0007284!9.66e-46!86;UBERON:0002346!5.86e-43!90;UBERON:0001017!1.90e-42!82;UBERON:0000073!1.16e-41!94;UBERON:0001016!1.16e-41!94;UBERON:0001049!1.59e-36!57;UBERON:0005068!1.59e-36!57;UBERON:0006241!1.59e-36!57;UBERON:0007135!1.59e-36!57;UBERON:0000955!1.32e-34!69;UBERON:0006238!1.32e-34!69;UBERON:0000033!8.70e-34!123;UBERON:0002616!8.50e-33!59;UBERON:0000153!8.89e-33!129;UBERON:0007811!8.89e-33!129;UBERON:0003056!2.00e-32!61;UBERON:0004121!3.01e-30!169;UBERON:0000924!4.28e-29!173;UBERON:0006601!4.28e-29!173;UBERON:0002780!2.31e-26!41;UBERON:0001890!2.31e-26!41;UBERON:0006240!2.31e-26!41;UBERON:0002020!2.33e-26!34;UBERON:0003528!2.33e-26!34;UBERON:0001893!2.50e-26!34;UBERON:0001869!3.48e-26!32;UBERON:0003080!1.55e-25!42;UBERON:0002791!6.38e-25!33;UBERON:0000956!5.55e-22!25;UBERON:0000203!5.55e-22!25;UBERON:0007023!6.03e-21!115;UBERON:0002619!2.98e-17!22;UBERON:0001950!5.92e-17!20;UBERON:0007625!7.12e-13!11;UBERON:0003076!4.94e-12!15;UBERON:0003057!4.94e-12!15;UBERON:0004733!1.42e-10!12;UBERON:0002028!1.42e-10!12;UBERON:0007277!1.42e-10!12;UBERON:0001871!2.71e-10!7;UBERON:0004732!1.33e-09!13;UBERON:0000025!1.47e-09!194;UBERON:0000970!4.37e-09!20;UBERON:0002680!5.76e-09!9;UBERON:0001895!5.76e-09!9;UBERON:0010092!5.76e-09!9;UBERON:0000020!5.86e-09!23;UBERON:0001456!1.15e-08!21;UBERON:0000488!1.31e-08!4;UBERON:0002104!1.61e-08!21;UBERON:0001032!1.86e-08!24;UBERON:0004456!1.86e-08!24;UBERON:0000483!2.69e-08!309;UBERON:0000064!3.21e-08!219;UBERON:0000019!3.70e-08!19;UBERON:0000047!3.70e-08!19;UBERON:0004088!3.70e-08!19;UBERON:0003072!3.70e-08!19;UBERON:0003071!3.70e-08!19;UBERON:0004128!3.70e-08!19;UBERON:0000119!4.61e-08!312;UBERON:0000477!6.40e-08!286;UBERON:0000475!2.01e-07!365;UBERON:0000481!2.07e-07!347;UBERON:0000062!2.30e-07!511;UBERON:0004111!3.83e-07!241;UBERON:0000200!5.08e-07!6;UBERON:0001778!5.73e-07!3;UBERON:0001775!5.73e-07!3 | ||
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| ||
|short_description=p10@SHROOM3 | |short_description=p10@SHROOM3 | ||
}} | }} |
Revision as of 16:38, 17 November 2012
Short description: | p10@SHROOM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_SHROOM3_5end |
Coexpression cluster: | C1944_Astrocyte_Ciliary_Lens_colon_teratocarcinoma_gastric_Neural |
Association with transcript: | 19bp_to_ENST00000466541_5end |
EntrezGene: | SHROOM3 |
HGNC: | 30422 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 4.37e-35 | 7 |
macroglial cell | 4.37e-35 | 7 |
astrocyte | 4.37e-35 | 7 |
oligodendrocyte precursor cell | 4.37e-35 | 7 |
astrocyte of the cerebral cortex | 3.78e-22 | 3 |
ciliated cell | 6.21e-22 | 3 |
ciliated epithelial cell | 6.21e-22 | 3 |
multi-ciliated epithelial cell | 6.21e-22 | 3 |
non-pigmented ciliary epithelial cell | 6.21e-22 | 3 |
neural cell | 3.05e-19 | 25 |
glial cell (sensu Vertebrata) | 4.17e-19 | 15 |
glial cell | 4.17e-19 | 15 |
glioblast | 4.17e-19 | 15 |
glioblast (sensu Vertebrata) | 4.17e-19 | 15 |
neuron associated cell | 5.16e-17 | 17 |
neuron associated cell (sensu Vertebrata) | 5.16e-17 | 17 |
neurectodermal cell | 3.92e-14 | 59 |
ectodermal cell | 2.90e-11 | 72 |
astrocyte of the cerebellum | 5.68e-10 | 3 |
pigment cell (sensu Vertebrata) | 6.24e-08 | 1 |
iris pigment epithelial cell | 6.24e-08 | 1 |
crystallin accumulating cell | 7.97e-08 | 4 |
vertebrate lens cell | 7.97e-08 | 4 |
lens epithelial cell | 7.97e-08 | 4 |
migratory neural crest cell | 4.62e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.47e-15 | 2 |
paranasal sinus cancer | 5.43e-08 | 1 |
maxillary sinus cancer | 5.43e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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