FFCP PHASE1:Hg19::chr4:109541772..109541801,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000012!2.22e-39!682;CL:0000548!2.53e-37!679;CL:0000004!2.53e-37!679;CL:0000255!2.53e-37!679;CL:0000144!9.23e-32!625;CL:0002321!3.53e-26!248;CL:0000220!3.65e-25!246;CL:0000003!1.08e-21!722;CL:0002371!3.42e-20!591;CL:0000222!6.10e-15!119;CL:0000066!5.03e-14!254;CL:0000055!5.34e-13!180;CL:0000393!9.75e-11!60;CL:0000211!9.75e-11!60;CL:0000063!3.74e-10!578;CL:0000680!4.08e-10!57;CL:0000056!4.08e-10!57;CL:0000355!4.08e-10!57;CL:0000183!5.83e-10!59;CL:0000187!1.55e-09!54;CL:0000192!4.68e-08!42;CL:0000514!4.68e-08!42;CL:0000359!4.84e-07!32;CL:0000221!5.21e-07!71 | |ontology_enrichment_celltype=CL:0000012!2.22e-39!682;CL:0000548!2.53e-37!679;CL:0000004!2.53e-37!679;CL:0000255!2.53e-37!679;CL:0000144!9.23e-32!625;CL:0002321!3.53e-26!248;CL:0000220!3.65e-25!246;CL:0000003!1.08e-21!722;CL:0002371!3.42e-20!591;CL:0000222!6.10e-15!119;CL:0000066!5.03e-14!254;CL:0000055!5.34e-13!180;CL:0000393!9.75e-11!60;CL:0000211!9.75e-11!60;CL:0000063!3.74e-10!578;CL:0000680!4.08e-10!57;CL:0000056!4.08e-10!57;CL:0000355!4.08e-10!57;CL:0000183!5.83e-10!59;CL:0000187!1.55e-09!54;CL:0000192!4.68e-08!42;CL:0000514!4.68e-08!42;CL:0000359!4.84e-07!32;CL:0000221!5.21e-07!71 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.59e-26,250;CL:0000222,5.98e-15,121;CL:0000066,3.49e-14,253;CL:0000393,1.88e-10,61;CL:0000211,1.88e-10,61;CL:0000680,7.81e-10,58;CL:0000056,7.81e-10,58;CL:0000355,7.81e-10,58;CL:0000187,2.95e-09,55;CL:0000192,9.14e-08,43;CL:0000514,9.14e-08,43;CL:0000221,2.12e-07,72;CL:0000359,4.79e-07,32 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!1.16e-14!239;DOID:162!2.02e-14!235;DOID:2531!3.78e-12!51;DOID:0060083!3.78e-12!51;DOID:0050686!6.07e-11!137;DOID:1240!2.14e-09!39;DOID:8692!1.53e-08!31 | |ontology_enrichment_disease=DOID:14566!1.16e-14!239;DOID:162!2.02e-14!235;DOID:2531!3.78e-12!51;DOID:0060083!3.78e-12!51;DOID:0050686!6.07e-11!137;DOID:1240!2.14e-09!39;DOID:8692!1.53e-08!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.74e-08;31!DOID:1240;8.44e-08;39!DOID:2531;1.13e-07;51!DOID:0060083;1.13e-07;51 | |ontology_enrichment_disease_v019=DOID:8692;2.74e-08;31!DOID:1240;8.44e-08;39!DOID:2531;1.13e-07;51!DOID:0060083;1.13e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:14566,1.13e-14,239;DOID:162,1.98e-14,235;DOID:2531,3.71e-12,51;DOID:0060083,3.71e-12,51;DOID:0050686,5.98e-11,137;DOID:1240,2.11e-09,39;DOID:8692,1.51e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002049!5.74e-11!79;UBERON:0007798!5.74e-11!79;UBERON:0000486!6.29e-10!82;UBERON:0000914!2.34e-09!83;UBERON:0002329!2.34e-09!83;UBERON:0003077!2.34e-09!83;UBERON:0003059!2.34e-09!83;UBERON:0007282!2.34e-09!83;UBERON:0009618!2.34e-09!83;UBERON:0007285!2.34e-09!83;UBERON:0000055!4.00e-09!69;UBERON:0004290!4.33e-09!70;UBERON:0000490!1.06e-08!138;UBERON:0001134!1.65e-08!61;UBERON:0002036!1.65e-08!61;UBERON:0003082!1.65e-08!61;UBERON:0001637!4.68e-08!42;UBERON:0003509!4.68e-08!42;UBERON:0004572!4.68e-08!42;UBERON:0001981!1.16e-07!60;UBERON:0007500!1.16e-07!60;UBERON:0004537!1.16e-07!60;UBERON:0006965!1.16e-07!60;UBERON:0003914!1.22e-07!118;UBERON:0002385!1.60e-07!63;UBERON:0001015!1.60e-07!63;UBERON:0000383!1.60e-07!63;UBERON:0005256!1.75e-07!143;UBERON:0004872!7.12e-07!84 | |ontology_enrichment_uberon=UBERON:0002049!5.74e-11!79;UBERON:0007798!5.74e-11!79;UBERON:0000486!6.29e-10!82;UBERON:0000914!2.34e-09!83;UBERON:0002329!2.34e-09!83;UBERON:0003077!2.34e-09!83;UBERON:0003059!2.34e-09!83;UBERON:0007282!2.34e-09!83;UBERON:0009618!2.34e-09!83;UBERON:0007285!2.34e-09!83;UBERON:0000055!4.00e-09!69;UBERON:0004290!4.33e-09!70;UBERON:0000490!1.06e-08!138;UBERON:0001134!1.65e-08!61;UBERON:0002036!1.65e-08!61;UBERON:0003082!1.65e-08!61;UBERON:0001637!4.68e-08!42;UBERON:0003509!4.68e-08!42;UBERON:0004572!4.68e-08!42;UBERON:0001981!1.16e-07!60;UBERON:0007500!1.16e-07!60;UBERON:0004537!1.16e-07!60;UBERON:0006965!1.16e-07!60;UBERON:0003914!1.22e-07!118;UBERON:0002385!1.60e-07!63;UBERON:0001015!1.60e-07!63;UBERON:0000383!1.60e-07!63;UBERON:0005256!1.75e-07!143;UBERON:0004872!7.12e-07!84 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p3@RPL34 | |short_description=p3@RPL34 | ||
}} | }} |
Revision as of 02:18, 17 November 2012
Short description: | p3@RPL34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RPL34_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000503574, ENST00000506397_5end |
EntrezGene: | RPL34 |
HGNC: | 10340 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.59e-26 | 250 |
mesodermal cell | 5.98e-15 | 121 |
epithelial cell | 3.49e-14 | 253 |
electrically responsive cell | 1.88e-10 | 61 |
electrically active cell | 1.88e-10 | 61 |
muscle precursor cell | 7.81e-10 | 58 |
myoblast | 7.81e-10 | 58 |
multi-potent skeletal muscle stem cell | 7.81e-10 | 58 |
muscle cell | 2.95e-09 | 55 |
smooth muscle cell | 9.14e-08 | 43 |
smooth muscle myoblast | 9.14e-08 | 43 |
ectodermal cell | 2.12e-07 | 72 |
vascular associated smooth muscle cell | 4.79e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.90e-11 | 78 |
vascular system | 2.90e-11 | 78 |
epithelial vesicle | 2.16e-10 | 78 |
multilaminar epithelium | 1.02e-09 | 83 |
vessel | 2.09e-09 | 68 |
unilaminar epithelium | 3.05e-09 | 148 |
somite | 7.20e-09 | 71 |
presomitic mesoderm | 7.20e-09 | 71 |
presumptive segmental plate | 7.20e-09 | 71 |
dermomyotome | 7.20e-09 | 71 |
trunk paraxial mesoderm | 7.20e-09 | 71 |
dense mesenchyme tissue | 1.56e-08 | 73 |
paraxial mesoderm | 2.68e-08 | 72 |
presumptive paraxial mesoderm | 2.68e-08 | 72 |
skeletal muscle tissue | 2.81e-08 | 62 |
striated muscle tissue | 2.81e-08 | 62 |
myotome | 2.81e-08 | 62 |
artery | 4.97e-08 | 42 |
arterial blood vessel | 4.97e-08 | 42 |
arterial system | 4.97e-08 | 42 |
epithelial tube open at both ends | 6.24e-08 | 59 |
blood vessel | 6.24e-08 | 59 |
blood vasculature | 6.24e-08 | 59 |
vascular cord | 6.24e-08 | 59 |
epithelial tube | 8.60e-08 | 117 |
muscle tissue | 2.55e-07 | 64 |
musculature | 2.55e-07 | 64 |
musculature of body | 2.55e-07 | 64 |
mesenchyme | 3.09e-07 | 160 |
entire embryonic mesenchyme | 3.09e-07 | 160 |
splanchnic layer of lateral plate mesoderm | 4.54e-07 | 83 |
cardiovascular system | 7.29e-07 | 109 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.13e-14 | 239 |
cancer | 1.98e-14 | 235 |
hematologic cancer | 3.71e-12 | 51 |
immune system cancer | 3.71e-12 | 51 |
organ system cancer | 5.98e-11 | 137 |
leukemia | 2.11e-09 | 39 |
myeloid leukemia | 1.51e-08 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.