FFCP PHASE1:Hg19::chr4:63304920..63304933,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0002621!4.27e-11!3;CL:0002589!1.99e-07!2 | |ontology_enrichment_celltype=CL:0002621!4.27e-11!3;CL:0002589!1.99e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000319;7.00e-17;1!CL:0000159;4.18e-09;2!CL:1000415;8.41e-09;2 | |ontology_enrichment_celltype_v019=CL:0000319;7.00e-17;1!CL:0000159;4.18e-09;2!CL:1000415;8.41e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000319,6.47e-17,1;CL:0000159,4.02e-09,2;CL:1000415,8.74e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009497;3.50e-11;13 | |ontology_enrichment_development_v019=UBERON:0009497;3.50e-11;13 | ||
|ontology_enrichment_disease=DOID:305!1.65e-07!106;DOID:162!8.04e-07!235 | |ontology_enrichment_disease=DOID:305!1.65e-07!106;DOID:162!8.04e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:3030;7.00e-17;1!DOID:6193;7.00e-17;1!DOID:3112;8.86e-17;1!DOID:5662;1.04e-16;1!DOID:7;1.67e-09;39!DOID:3350;4.18e-09;2 | |ontology_enrichment_disease_v019=DOID:3030;7.00e-17;1!DOID:6193;7.00e-17;1!DOID:3112;8.86e-17;1!DOID:5662;1.04e-16;1!DOID:7;1.67e-09;39!DOID:3350;4.18e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3030,6.47e-17,1;DOID:6193,7.57e-17,1;DOID:3112,8.86e-17,1;DOID:5662,1.04e-16,1;DOID:305,6.46e-11,106;DOID:7,8.42e-10,39;DOID:0050687,8.52e-10,143;DOID:3350,4.34e-09,2;DOID:162,3.21e-08,235;DOID:14566,5.05e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001949!4.27e-11!3;UBERON:0002394!5.56e-09!4;UBERON:0003928!5.56e-09!4;UBERON:0002294!1.05e-08!7;UBERON:0001173!1.05e-08!7;UBERON:0004912!1.05e-08!7;UBERON:0001529!1.99e-07!2;UBERON:0007204!1.99e-07!2;UBERON:0003929!5.88e-07!54;UBERON:0002046!6.26e-07!5;UBERON:0004117!6.26e-07!5;UBERON:0007689!6.26e-07!5;UBERON:0007123!6.26e-07!5;UBERON:0003091!6.26e-07!5 | |ontology_enrichment_uberon=UBERON:0001949!4.27e-11!3;UBERON:0002394!5.56e-09!4;UBERON:0003928!5.56e-09!4;UBERON:0002294!1.05e-08!7;UBERON:0001173!1.05e-08!7;UBERON:0004912!1.05e-08!7;UBERON:0001529!1.99e-07!2;UBERON:0007204!1.99e-07!2;UBERON:0003929!5.88e-07!54;UBERON:0002046!6.26e-07!5;UBERON:0004117!6.26e-07!5;UBERON:0007689!6.26e-07!5;UBERON:0007123!6.26e-07!5;UBERON:0003091!6.26e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002294;5.10e-20;7!UBERON:0001173;5.10e-20;7!UBERON:0007195;1.31e-16;1!UBERON:0001282;1.93e-16;1!UBERON:0009842;1.93e-16;1!UBERON:0003704;1.93e-16;1!UBERON:0001171;1.93e-16;1!UBERON:0001172;1.93e-16;1!UBERON:0002394;3.73e-16;4!UBERON:0003928;3.73e-16;4!UBERON:0002423;5.09e-10;25!UBERON:0000058;5.19e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0002294;5.10e-20;7!UBERON:0001173;5.10e-20;7!UBERON:0007195;1.31e-16;1!UBERON:0001282;1.93e-16;1!UBERON:0009842;1.93e-16;1!UBERON:0003704;1.93e-16;1!UBERON:0001171;1.93e-16;1!UBERON:0001172;1.93e-16;1!UBERON:0002394;3.73e-16;4!UBERON:0003928;3.73e-16;4!UBERON:0002423;5.09e-10;25!UBERON:0000058;5.19e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.41e-16,1;UBERON:0001282,2.25e-16,1;UBERON:0009842,2.25e-16,1;UBERON:0003704,2.25e-16,1;UBERON:0001171,2.25e-16,1;UBERON:0001172,2.25e-16,1;UBERON:0002294,1.05e-15,9;UBERON:0001173,1.05e-15,9;UBERON:0004912,1.05e-15,9;UBERON:0002394,4.37e-11,6;UBERON:0003928,4.37e-11,6;UBERON:0009497,5.22e-10,25;UBERON:0000015,5.22e-10,25;UBERON:0002423,5.22e-10,25;UBERON:0006235,5.22e-10,25;UBERON:0004161,5.22e-10,25;UBERON:0003929,4.74e-07,54;UBERON:0008835,7.94e-07,22;UBERON:0003894,7.94e-07,22 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.445160178233687,0,0,0,0,0,0,0,0,0.532306030317022,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5367292871844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,3.77447074818773,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05095700524602,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0,0,6.36348320144981,0,0,0,0,0,0,0,0.19871461170299,0,0,1.20238230377301,0,0.19980960958213,0,0,0,0.288109595976299,0,0,0.543616824294456,1.67364554099733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,2.92425886013794,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0,6.63586853635042,0.633936370075881,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.076929442813,0.443568258651136,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,4.6301762548103,0,0,0,0,0,0,0,0,2.15927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41079230602953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897054900644907,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.445160178233687,0,0,0,0,0,0,0,0,0.532306030317022,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5367292871844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,3.77447074818773,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05095700524602,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0,0,6.36348320144981,0,0,0,0,0,0,0,0.19871461170299,0,0,1.20238230377301,0,0.19980960958213,0,0,0,0.288109595976299,0,0,0.543616824294456,1.67364554099733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,2.92425886013794,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0,6.63586853635042,0.633936370075881,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.076929442813,0.443568258651136,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,4.6301762548103,0,0,0,0,0,0,0,0,2.15927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41079230602953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897054900644907,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:63304920..63304933,- | |short_description=p@chr4:63304920..63304933,- | ||
}} | }} |
Revision as of 01:58, 16 November 2012
Short description: | p@chr4:63304920..63304933, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:63304920..63304933, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 6.47e-17 | 1 |
seromucus secreting cell | 4.02e-09 | 2 |
epithelial cell of gall bladder | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.41e-16 | 1 |
intralobular bile duct | 2.25e-16 | 1 |
acinus | 2.25e-16 | 1 |
intrahepatic bile duct | 2.25e-16 | 1 |
portal lobule | 2.25e-16 | 1 |
hepatic acinus | 2.25e-16 | 1 |
biliary system | 1.05e-15 | 9 |
biliary tree | 1.05e-15 | 9 |
biliary bud | 1.05e-15 | 9 |
bile duct | 4.37e-11 | 6 |
digestive system duct | 4.37e-11 | 6 |
epithelium of foregut-midgut junction | 5.22e-10 | 25 |
anatomical boundary | 5.22e-10 | 25 |
hepatobiliary system | 5.22e-10 | 25 |
foregut-midgut junction | 5.22e-10 | 25 |
septum transversum | 5.22e-10 | 25 |
gut epithelium | 4.74e-07 | 54 |
hepatic diverticulum | 7.94e-07 | 22 |
liver primordium | 7.94e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 6.47e-17 | 1 |
epithelioid sarcoma | 7.57e-17 | 1 |
papillary adenocarcinoma | 8.86e-17 | 1 |
pleomorphic carcinoma | 1.04e-16 | 1 |
carcinoma | 6.46e-11 | 106 |
disease of anatomical entity | 8.42e-10 | 39 |
cell type cancer | 8.52e-10 | 143 |
mesenchymal cell neoplasm | 4.34e-09 | 2 |
cancer | 3.21e-08 | 235 |
disease of cellular proliferation | 5.05e-08 | 239 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.