FFCP PHASE1:Hg19::chr22:31644352..31644379,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002076!1.15e-09!43;CL:0002077!2.35e-08!33;CL:0000220!4.42e-08!246;CL:0000066!5.01e-08!254;CL:0002321!6.33e-08!248;CL:0000359!1.30e-07!32;CL:0000192!9.69e-07!42;CL:0000514!9.69e-07!42 | |ontology_enrichment_celltype=CL:0002076!1.15e-09!43;CL:0002077!2.35e-08!33;CL:0000220!4.42e-08!246;CL:0000066!5.01e-08!254;CL:0002321!6.33e-08!248;CL:0000359!1.30e-07!32;CL:0000192!9.69e-07!42;CL:0000514!9.69e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000349;4.14e-10;19!CL:0002076;1.63e-08;42!CL:0002077;5.10e-08;34!CL:0000359;1.42e-07;32!CL:0002159;7.75e-07;14 | |ontology_enrichment_celltype_v019=CL:0000349;4.14e-10;19!CL:0002076;1.63e-08;42!CL:0002077;5.10e-08;34!CL:0000359;1.42e-07;32!CL:0002159;7.75e-07;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.87e-10,42;CL:0000349,3.87e-10,19;CL:0002077,6.03e-09,34;CL:0000066,1.26e-08,253;CL:0000359,4.76e-08,32;CL:0002159,7.27e-07,14 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.43e-22!365;UBERON:0004121!1.07e-15!169;UBERON:0000064!2.45e-15!219;UBERON:0000483!3.86e-15!309;UBERON:0000119!4.93e-15!312;UBERON:0000468!5.25e-15!659;UBERON:0000481!9.37e-15!347;UBERON:0000924!3.50e-14!173;UBERON:0006601!3.50e-14!173;UBERON:0000033!1.13e-12!123;UBERON:0000153!2.31e-12!129;UBERON:0007811!2.31e-12!129;UBERON:0000467!1.05e-11!625;UBERON:0000922!1.67e-11!612;UBERON:0000480!1.86e-11!626;UBERON:0002050!3.70e-11!605;UBERON:0005423!3.70e-11!605;UBERON:0000923!5.50e-11!604;UBERON:0005291!5.50e-11!604;UBERON:0006598!5.50e-11!604;UBERON:0002532!5.50e-11!604;UBERON:0003075!5.03e-10!86;UBERON:0007284!5.03e-10!86;UBERON:0000477!1.22e-09!286;UBERON:0000062!3.15e-09!511;UBERON:0002346!1.98e-08!90;UBERON:0005631!2.48e-08!14;UBERON:0000158!2.48e-08!14;UBERON:0001049!2.48e-08!57;UBERON:0005068!2.48e-08!57;UBERON:0006241!2.48e-08!57;UBERON:0007135!2.48e-08!57;UBERON:0003056!2.56e-08!61;UBERON:0002616!4.31e-08!59;UBERON:0004111!8.64e-08!241;UBERON:0005085!8.72e-08!29;UBERON:0000478!1.26e-07!24;UBERON:0004923!1.65e-07!57;UBERON:0005743!1.95e-07!86;UBERON:0000063!7.53e-07!97;UBERON:0000486!9.41e-07!82;UBERON:0001017!9.61e-07!82 | |ontology_enrichment_uberon=UBERON:0000475!4.43e-22!365;UBERON:0004121!1.07e-15!169;UBERON:0000064!2.45e-15!219;UBERON:0000483!3.86e-15!309;UBERON:0000119!4.93e-15!312;UBERON:0000468!5.25e-15!659;UBERON:0000481!9.37e-15!347;UBERON:0000924!3.50e-14!173;UBERON:0006601!3.50e-14!173;UBERON:0000033!1.13e-12!123;UBERON:0000153!2.31e-12!129;UBERON:0007811!2.31e-12!129;UBERON:0000467!1.05e-11!625;UBERON:0000922!1.67e-11!612;UBERON:0000480!1.86e-11!626;UBERON:0002050!3.70e-11!605;UBERON:0005423!3.70e-11!605;UBERON:0000923!5.50e-11!604;UBERON:0005291!5.50e-11!604;UBERON:0006598!5.50e-11!604;UBERON:0002532!5.50e-11!604;UBERON:0003075!5.03e-10!86;UBERON:0007284!5.03e-10!86;UBERON:0000477!1.22e-09!286;UBERON:0000062!3.15e-09!511;UBERON:0002346!1.98e-08!90;UBERON:0005631!2.48e-08!14;UBERON:0000158!2.48e-08!14;UBERON:0001049!2.48e-08!57;UBERON:0005068!2.48e-08!57;UBERON:0006241!2.48e-08!57;UBERON:0007135!2.48e-08!57;UBERON:0003056!2.56e-08!61;UBERON:0002616!4.31e-08!59;UBERON:0004111!8.64e-08!241;UBERON:0005085!8.72e-08!29;UBERON:0000478!1.26e-07!24;UBERON:0004923!1.65e-07!57;UBERON:0005743!1.95e-07!86;UBERON:0000063!7.53e-07!97;UBERON:0000486!9.41e-07!82;UBERON:0001017!9.61e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0010371;2.47e-10;31!UBERON:0000478;1.74e-08;24 | |ontology_enrichment_uberon_v019=UBERON:0010371;2.47e-10;31!UBERON:0000478;1.74e-08;24 | ||
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| ||
|short_description=p2@LIMK2 | |short_description=p2@LIMK2 | ||
}} | }} |
Revision as of 19:36, 15 November 2012
Short description: | p2@LIMK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LIMK2_5end |
Coexpression cluster: | C4094_Urothelial_Prostate_serous_Mallassezderived_Keratinocyte_Esophageal_Corneal |
Association with transcript: | 0bp_to_ENST00000436394_5end |
EntrezGene: | LIMK2 |
HGNC: | 6614 |
UniProt: | F5GY29 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.87e-10 | 42 |
extraembryonic cell | 3.87e-10 | 19 |
ecto-epithelial cell | 6.03e-09 | 34 |
epithelial cell | 1.26e-08 | 253 |
vascular associated smooth muscle cell | 4.76e-08 | 32 |
general ecto-epithelial cell | 7.27e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 1.57e-16 | 104 |
ectoderm-derived structure | 4.11e-14 | 171 |
ectoderm | 4.11e-14 | 171 |
presumptive ectoderm | 4.11e-14 | 171 |
epithelium | 1.94e-13 | 306 |
cell layer | 4.83e-13 | 309 |
developing anatomical structure | 3.85e-11 | 581 |
embryo | 1.89e-10 | 592 |
embryonic structure | 3.92e-10 | 564 |
neural plate | 7.14e-10 | 82 |
presumptive neural plate | 7.14e-10 | 82 |
germ layer | 5.60e-09 | 560 |
germ layer / neural crest | 5.60e-09 | 560 |
embryonic tissue | 5.60e-09 | 560 |
presumptive structure | 5.60e-09 | 560 |
germ layer / neural crest derived structure | 5.60e-09 | 560 |
epiblast (generic) | 5.60e-09 | 560 |
extraembryonic membrane | 8.06e-09 | 14 |
membranous layer | 8.06e-09 | 14 |
extraembryonic structure | 1.65e-08 | 24 |
structure with developmental contribution from neural crest | 2.00e-08 | 132 |
neurectoderm | 2.19e-08 | 86 |
neural tube | 2.36e-08 | 56 |
neural rod | 2.36e-08 | 56 |
future spinal cord | 2.36e-08 | 56 |
neural keel | 2.36e-08 | 56 |
pre-chordal neural plate | 4.35e-08 | 61 |
anatomical conduit | 8.01e-08 | 240 |
ectodermal placode | 1.05e-07 | 31 |
regional part of nervous system | 1.84e-07 | 53 |
regional part of brain | 1.84e-07 | 53 |
tube | 9.74e-07 | 192 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.