FFCP PHASE1:Hg19::chr12:96184555..96184609,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!2.61e-18!254;CL:0002139!1.89e-08!24;CL:0000076!2.48e-07!62;CL:0000220!4.84e-07!246;CL:0002321!7.34e-07!248;CL:0002078!9.14e-07!44;CL:0000213!9.23e-07!57;CL:0000215!9.23e-07!57 | |ontology_enrichment_celltype=CL:0000066!2.61e-18!254;CL:0002139!1.89e-08!24;CL:0000076!2.48e-07!62;CL:0000220!4.84e-07!246;CL:0002321!7.34e-07!248;CL:0002078!9.14e-07!44;CL:0000213!9.23e-07!57;CL:0000215!9.23e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002139;6.46e-09;24!CL:1000449;3.29e-07;15!CL:1000497;4.12e-07;17!CL:0002518;4.12e-07;17 | |ontology_enrichment_celltype_v019=CL:0002139;6.46e-09;24!CL:1000449;3.29e-07;15!CL:1000497;4.12e-07;17!CL:0002518;4.12e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.78e-18,253;CL:0002139,6.06e-09,24;CL:0002078,7.06e-08,45;CL:0000213,2.47e-07,58;CL:0000215,2.47e-07,58;CL:1000449,3.39e-07,15;CL:1000497,3.51e-07,17;CL:0002518,3.51e-07,17;CL:0000076,7.60e-07,63 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!8.24e-26!286;UBERON:0004111!2.19e-23!241;UBERON:0000481!3.46e-20!347;UBERON:0000467!1.73e-16!625;UBERON:0000483!2.25e-16!309;UBERON:0000480!3.53e-16!626;UBERON:0000119!3.88e-16!312;UBERON:0000468!1.63e-15!659;UBERON:0000025!5.86e-15!194;UBERON:0000475!2.60e-14!365;UBERON:0000064!1.48e-13!219;UBERON:0004119!8.34e-13!169;UBERON:0000925!8.34e-13!169;UBERON:0006595!8.34e-13!169;UBERON:0003914!3.34e-12!118;UBERON:0003104!1.98e-11!238;UBERON:0009142!1.98e-11!238;UBERON:0001007!6.33e-11!155;UBERON:0001555!6.33e-11!155;UBERON:0007026!6.33e-11!155;UBERON:0000062!1.41e-10!511;UBERON:0002050!4.66e-10!605;UBERON:0005423!4.66e-10!605;UBERON:0000923!4.69e-10!604;UBERON:0005291!4.69e-10!604;UBERON:0006598!4.69e-10!604;UBERON:0002532!4.69e-10!604;UBERON:0000922!5.03e-10!612;UBERON:0002100!1.18e-09!216;UBERON:0001008!5.64e-09!45;UBERON:0003064!6.14e-09!37;UBERON:0000464!9.80e-09!104;UBERON:0006554!1.02e-08!44;UBERON:0002553!1.16e-08!70;UBERON:0003886!1.56e-08!63;UBERON:0000466!1.94e-08!126;UBERON:0004872!3.15e-08!84;UBERON:0000077!3.44e-08!130;UBERON:0004923!3.94e-08!57;UBERON:0000055!5.54e-08!69;UBERON:0003103!6.26e-08!69;UBERON:0000058!2.27e-07!26;UBERON:0004876!3.00e-07!20;UBERON:0004921!3.24e-07!129;UBERON:0004185!3.24e-07!129;UBERON:0003887!4.03e-07!21;UBERON:0006555!6.14e-07!17;UBERON:0005103!6.14e-07!17;UBERON:0000083!6.14e-07!17;UBERON:0009201!6.14e-07!17;UBERON:0004819!6.14e-07!17;UBERON:0006553!6.14e-07!17;UBERON:0003074!6.14e-07!17;UBERON:0003060!6.14e-07!17;UBERON:0000080!6.41e-07!18;UBERON:0002120!6.41e-07!18;UBERON:0004875!6.41e-07!18;UBERON:0005721!6.41e-07!18;UBERON:0005754!6.41e-07!18;UBERON:0007297!6.41e-07!18;UBERON:0002049!6.69e-07!79;UBERON:0007798!6.69e-07!79 | |ontology_enrichment_uberon=UBERON:0000477!8.24e-26!286;UBERON:0004111!2.19e-23!241;UBERON:0000481!3.46e-20!347;UBERON:0000467!1.73e-16!625;UBERON:0000483!2.25e-16!309;UBERON:0000480!3.53e-16!626;UBERON:0000119!3.88e-16!312;UBERON:0000468!1.63e-15!659;UBERON:0000025!5.86e-15!194;UBERON:0000475!2.60e-14!365;UBERON:0000064!1.48e-13!219;UBERON:0004119!8.34e-13!169;UBERON:0000925!8.34e-13!169;UBERON:0006595!8.34e-13!169;UBERON:0003914!3.34e-12!118;UBERON:0003104!1.98e-11!238;UBERON:0009142!1.98e-11!238;UBERON:0001007!6.33e-11!155;UBERON:0001555!6.33e-11!155;UBERON:0007026!6.33e-11!155;UBERON:0000062!1.41e-10!511;UBERON:0002050!4.66e-10!605;UBERON:0005423!4.66e-10!605;UBERON:0000923!4.69e-10!604;UBERON:0005291!4.69e-10!604;UBERON:0006598!4.69e-10!604;UBERON:0002532!4.69e-10!604;UBERON:0000922!5.03e-10!612;UBERON:0002100!1.18e-09!216;UBERON:0001008!5.64e-09!45;UBERON:0003064!6.14e-09!37;UBERON:0000464!9.80e-09!104;UBERON:0006554!1.02e-08!44;UBERON:0002553!1.16e-08!70;UBERON:0003886!1.56e-08!63;UBERON:0000466!1.94e-08!126;UBERON:0004872!3.15e-08!84;UBERON:0000077!3.44e-08!130;UBERON:0004923!3.94e-08!57;UBERON:0000055!5.54e-08!69;UBERON:0003103!6.26e-08!69;UBERON:0000058!2.27e-07!26;UBERON:0004876!3.00e-07!20;UBERON:0004921!3.24e-07!129;UBERON:0004185!3.24e-07!129;UBERON:0003887!4.03e-07!21;UBERON:0006555!6.14e-07!17;UBERON:0005103!6.14e-07!17;UBERON:0000083!6.14e-07!17;UBERON:0009201!6.14e-07!17;UBERON:0004819!6.14e-07!17;UBERON:0006553!6.14e-07!17;UBERON:0003074!6.14e-07!17;UBERON:0003060!6.14e-07!17;UBERON:0000080!6.41e-07!18;UBERON:0002120!6.41e-07!18;UBERON:0004875!6.41e-07!18;UBERON:0005721!6.41e-07!18;UBERON:0005754!6.41e-07!18;UBERON:0007297!6.41e-07!18;UBERON:0002049!6.69e-07!79;UBERON:0007798!6.69e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.29e-07;15!UBERON:0004819;3.29e-07;15!UBERON:0001285;3.29e-07;15!UBERON:0007684;3.29e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0006555;3.29e-07;15!UBERON:0004819;3.29e-07;15!UBERON:0001285;3.29e-07;15!UBERON:0007684;3.29e-07;15 | ||
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|phase1_expression=1.2717486548939,0.214100523890983,4.22863212287913,3.00219895059391,2.23480547213644,1.74467704820074,2.53299878168311,0.631719873426831,0,3.68600904752263,2.09340350391728,7.42700665242586,9.75937819445278,11.0152054134441,5.30235801164665,2.6893005858071,0,0.730310090387373,0,2.21617904538218,0.612002073732759,1.56727360739044,3.43483184557268,1.77936752594749,2.25976751270645,0,0,0,0.393364276848904,1.15148819429164,0.154816123316076,1.83884244895785,1.204823675113,3.32778609150109,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,1.23360899399706,0,0,0,0,0,0.589211814949674,0.221533894583621,0,0.25618263945135,0,0,0,0,0,0,0,0,3.44898444241729,1.03088233644789,0,1.27426165729639,1.95325036156926,0,2.40920190524436,1.79181255616186,0,0.947109008176067,1.64225599384209,1.20964045934839,0.802320587350522,0.868946423296794,0,2.01210257911091,3.06870148424473,14.8190052477672,18.048164782892,11.4428749979051,3.9764297352555,10.705967146658,3.02511414925017,3.54767035940102,0.87834785693126,5.95954793514592,0.364295288292542,1.48313777113772,0,0,0,0,0,0,5.56534740626774,6.02164216574287,9.02565304179745,9.61023501270816,9.22898759661793,10.7296036356626,3.55291443112578,17.0555061051757,13.519117982095,26.4429284084089,6.44526907374635,14.4451700086517,15.6199716830828,5.51494620518803,5.67099363517232,8.92997282840798,4.93964619777574,4.50445921933289,0,4.74632829784064,3.11442964681692,0,3.87780264148325,2.18047026071267,22.3637378262893,9.75054939817264,5.03154887090231,13.7681577959431,6.38403087957043,7.28880880184999,2.1349799145941,8.6333641946006,0.311211035399766,2.15537075311501,1.63461903113459,0.454072282934794,0,0.937285727335186,0.936480230490962,0.570471821544449,6.42629326372745,1.05691048779388,0.809364721840658,0.702254033511242,6.73708765141148,2.08818339430006,8.88601718111583,7.12801714369232,3.95627086845691,0.910161361938026,1.43723628363248,4.04006673489759,2.12701483782339,3.3247693858102,5.26773145057006,6.43624371177941,8.41333129876942,4.19699077692078,6.81680615617675,15.1625746061183,1.27159140695737,0.600182192168805,0.412210116953756,11.0785432219621,11.7253619488902,0.506328996723799,0.0974370051611986,0.757301322732344,3.77404584433427,5.98090410229604,2.4850671476163,2.11579406278045,6.95198428472999,4.25173876959253,3.00020732649918,2.29443676311203,0.609868530647977,0.927708378250397,0.813357600086629,1.0366105501537,0.756962552626885,0,4.69348596989448,7.07565032012174,1.38134921352481,1.85747171212792,2.88751792667834,3.31259040111563,2.86593973132773,2.6511213287183,3.639701100169,4.13970943775572,2.60997681022206,3.50561401216427,2.74710051175484,3.07797725557112,5.90524363699719,0,0.4115740113314,0,5.07020139287323,0.982827216677626,2.95394953340702,0,8.48620225947483,2.05881372358231,2.41450627898976,3.37205259772859,1.3068766413512,4.16648003213383,4.88712457965487,0,8.6598805215164,1.97081688457631,2.11335649624479,7.07395594029262,8.33373922637899,8.94194515502612,1.58040879591855,0,0,0,0,2.81201501960331,7.0552493843521,1.98485136139341,6.44821363460508,1.16253575405585,1.53353071666084,0,0,0.207328115540772,0.144119953416961,0,0,0,0,1.71072446022705,0.514137463516618,0,0,1.12131084345361,0.87192013766656,1.83345714552375,0.646358578788889,0,1.690605505112,8.77595784730073,9.36066932202295,1.28603687131071,0,0.266422179016099,2.00169191121407,0,0,0.325736184293735,0.355391948742546,0,4.82303003295338,6.97226766880235,2.59929777073348,0,0,0,22.2851115607172,16.0806710167759,0,5.35690834670043,6.1642896765115,0.537182889719687,0,1.18218456121156,1.72502059887614,0.641715181398742,0.254094624222463,5.20559415430487,2.31986643833309,5.69555302136786,0.637938751653163,0,0,0,4.41689370188904,1.50051156317903,9.49427582949075,5.40724239980099,5.70972764150918,7.254311091561,7.02848489956279,3.31040709700491,4.5481500811197,7.24311499047534,7.97070718242524,6.63729006750131,8.16705975999979,0.195801157462741,0.686286847621712,1.24060815673732,0,0.74709290462411,1.5156378572313,4.99306318531491,4.83824469327489,1.98486246255021,0.920771839728375,1.68396056659844,5.38184426873944,4.60536524160033,8.36440389946759,10.3892646511494,0.308419387605311,0.710246901252508,1.31403449622095,2.07701771673448,0.929683027679674,3.62578348774867,9.62431057455767,12.2467715284742,4.01850568576124,3.09554985611419,3.93373244878272,12.6335891614075,21.4872790521317,10.980896768476,11.6911379722609,20.8992225207894,5.68666920354483,6.46356080050759,13.1708708822305,20.0495428497376,2.43851793789468,2.50844886927427,11.2145560139817,12.4661401339309,7.61174166055406,0,0,4.35965212697862,3.93617574839647,5.20605431462885,4.73988653579522,1.19040304263846,0.742585499285292,4.01985876597321,2.60024098414608,4.82051789532479,6.86362099874066,0.308097234229289,0.614014698904518,0.275673144969061,0.322260734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| ||
|short_description=p2@NTN4 | |short_description=p2@NTN4 | ||
}} | }} |
Revision as of 19:24, 15 November 2012
Short description: | p2@NTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_NTN4_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000344911_5end |
EntrezGene: | NTN4 |
HGNC: | 13658 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.78e-18 | 253 |
endothelial cell of vascular tree | 6.06e-09 | 24 |
meso-epithelial cell | 7.06e-08 | 45 |
lining cell | 2.47e-07 | 58 |
barrier cell | 2.47e-07 | 58 |
epithelial cell of nephron | 3.39e-07 | 15 |
kidney cell | 3.51e-07 | 17 |
kidney epithelial cell | 3.51e-07 | 17 |
squamous epithelial cell | 7.60e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 8.07e-22 | 240 |
tube | 4.19e-13 | 192 |
epithelium | 4.59e-13 | 306 |
cell layer | 1.02e-12 | 309 |
epithelial tube | 3.72e-12 | 117 |
endoderm-derived structure | 2.33e-11 | 160 |
endoderm | 2.33e-11 | 160 |
presumptive endoderm | 2.33e-11 | 160 |
renal system | 1.43e-09 | 48 |
digestive system | 1.93e-09 | 145 |
digestive tract | 1.93e-09 | 145 |
primitive gut | 1.93e-09 | 145 |
urinary system structure | 2.65e-09 | 47 |
organ component layer | 2.32e-08 | 66 |
splanchnic layer of lateral plate mesoderm | 2.74e-08 | 83 |
compound organ | 7.23e-08 | 68 |
vessel | 7.58e-08 | 68 |
excretory tube | 1.81e-07 | 16 |
kidney epithelium | 1.81e-07 | 16 |
embryo | 2.08e-07 | 592 |
orifice | 2.72e-07 | 36 |
nephron epithelium | 3.39e-07 | 15 |
renal tubule | 3.39e-07 | 15 |
nephron tubule | 3.39e-07 | 15 |
nephron | 3.39e-07 | 15 |
uriniferous tubule | 3.39e-07 | 15 |
nephrogenic mesenchyme | 3.39e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.