FFCP PHASE1:Mm9::chr4:44717334..44717367,-: Difference between revisions
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|id=chr4:44717334..44717367,- | |id=chr4:44717334..44717367,- | ||
|ontology_enrichment_celltype=CL:0000117!9.75e-10!23;CL:0000337!9.75e-10!23 | |ontology_enrichment_celltype=CL:0000117!9.75e-10!23;CL:0000337!9.75e-10!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.79e-13,6;CL:0000556,2.79e-13,6;CL:0000117,1.22e-11,23;CL:0000337,1.22e-11,23;CL:0000120,6.16e-11,3;CL:0002614,1.48e-09,3;CL:0002610,1.69e-09,3;CL:0000050,9.63e-09,9;CL:0000540,1.47e-07,33;CL:0000047,1.47e-07,33;CL:0000031,1.47e-07,33;CL:0000404,1.47e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002950,4.34e-12,4;UBERON:0001891,4.34e-12,4;UBERON:0009616,4.34e-12,4;UBERON:0010286,4.34e-12,4;UBERON:0002038,1.48e-09,3;UBERON:0009663,1.48e-09,3;UBERON:0009661,1.48e-09,3;UBERON:0000125,1.48e-09,3;UBERON:0002308,1.48e-09,3;UBERON:0004684,1.69e-09,3;UBERON:0002275,1.69e-09,3;UBERON:0002106,2.57e-08,6;UBERON:0004457,2.57e-08,6;UBERON:0000042,2.57e-08,6;UBERON:0004854,2.57e-08,6;UBERON:0009034,2.57e-08,6;UBERON:0002095,2.57e-08,6;UBERON:0004782,2.57e-08,6;UBERON:0003281,2.57e-08,6;UBERON:0009664,2.57e-08,6;UBERON:0002296,2.57e-08,6;UBERON:0005602,2.57e-08,6;UBERON:0001179,2.57e-08,6;UBERON:0006293,2.57e-08,6;UBERON:0003887,2.46e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,2.42970320867791,0,13.5648731104042,15.219702130237,10.6097412949508,0.255129870453209,0.0992909512008853,0,0.319984845586813,0.45881856213434,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.39582593923324,0,0,0,0,0,19.624696703381,21.6886301501533,15.2119536841483,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0.244981598429908,0.0958454710182364,0,4.40463523997555,1.0214987046815,3.22573719838111,0.395658863190582,0,0,5.862842979029,2.25105044012672,1.68078072554491,0.294628585473668,0.996601765593721,1.3047961207771,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,3.36619248741323,0,0,0,0,0,0.117588707135705,0,0,0,0,0.485300549842228,2.65009822152472,3.87900202508178,0,0,0,0.255457055208591,0,0,0,2.09706895166752,0,0,0,0,1.66230435647648,1.1356888414743,0,1.7416975885413,0,0,0,0.229902104433473,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405720242777006,0.964708639009667,0.763877555344259,0.863088412352432,0.486405680325106,0.274561413188081,0,0,0,0,0,0,1.10851914099963,0,0,0,0,0,0,0,0,0,0.318909537314974,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,0.642202359951168,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0.18542530201051,2.73393409276564,0,0.185194527369712,1.69531611304222,3.69074414846768,5.26189798375002,0,0.419854356970974,0.690999869022119,0,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.352071715937262,0,0,0,0.864090018773596,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,2.79317411380722,0.682934423016537,0.486213434136588,0.628839487883947,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.50695859978048,0.565879024158229,0.0936415074698824,0.256100609619477,0.402048282689293,0,0.463537303779422,0.192909220463705,0,0.441596760403192,0.342869252385415,0,0,0.290692833264657,0.282328141245992,0.338458431566706,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0.0985044823755635,0.409231043169689,0.619747364743864,0.385813221962283,0,0.233931608445408,0,0,0,1.15933917810211 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,2.42970320867791,0,13.5648731104042,15.219702130237,10.6097412949508,0.255129870453209,0.0992909512008853,0,0.319984845586813,0.45881856213434,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.39582593923324,0,0,0,0,0,19.624696703381,21.6886301501533,15.2119536841483,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0.244981598429908,0.0958454710182364,0,4.40463523997555,1.0214987046815,3.22573719838111,0.395658863190582,0,0,5.862842979029,2.25105044012672,1.68078072554491,0.294628585473668,0.996601765593721,1.3047961207771,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,3.36619248741323,0,0,0,0,0,0.117588707135705,0,0,0,0,0.485300549842228,2.65009822152472,3.87900202508178,0,0,0,0.255457055208591,0,0,0,2.09706895166752,0,0,0,0,1.66230435647648,1.1356888414743,0,1.7416975885413,0,0,0,0.229902104433473,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405720242777006,0.964708639009667,0.763877555344259,0.863088412352432,0.486405680325106,0.274561413188081,0,0,0,0,0,0,1.10851914099963,0,0,0,0,0,0,0,0,0,0.318909537314974,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,0.642202359951168,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0.18542530201051,2.73393409276564,0,0.185194527369712,1.69531611304222,3.69074414846768,5.26189798375002,0,0.419854356970974,0.690999869022119,0,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.352071715937262,0,0,0,0.864090018773596,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,2.79317411380722,0.682934423016537,0.486213434136588,0.628839487883947,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.50695859978048,0.565879024158229,0.0936415074698824,0.256100609619477,0.402048282689293,0,0.463537303779422,0.192909220463705,0,0.441596760403192,0.342869252385415,0,0,0.290692833264657,0.282328141245992,0.338458431566706,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0.0985044823755635,0.409231043169689,0.619747364743864,0.385813221962283,0,0.233931608445408,0,0,0,1.15933917810211 | ||
|short_description=p5@Pax5 | |short_description=p5@Pax5 | ||
}} | }} |
Revision as of 01:25, 15 November 2012
Short description: | p5@Pax5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Pax5_5end |
Coexpression cluster: | NA |
Association with transcript: | -456bp_to_ENSMUST00000146335_5end |
EntrezGene: | Pax5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.79e-13 | 6 |
megakaryocyte | 2.79e-13 | 6 |
CNS neuron (sensu Vertebrata) | 1.22e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.22e-11 | 23 |
granule cell | 6.16e-11 | 3 |
neuron of the substantia nigra | 1.48e-09 | 3 |
raphe nuclei neuron | 1.69e-09 | 3 |
megakaryocyte-erythroid progenitor cell | 9.63e-09 | 9 |
neuron | 1.47e-07 | 33 |
neuronal stem cell | 1.47e-07 | 33 |
neuroblast | 1.47e-07 | 33 |
electrically signaling cell | 1.47e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
regional part of midbrain | 4.34e-12 | 4 |
midbrain | 4.34e-12 | 4 |
presumptive midbrain | 4.34e-12 | 4 |
midbrain neural tube | 4.34e-12 | 4 |
substantia nigra | 1.48e-09 | 3 |
telencephalic nucleus | 1.48e-09 | 3 |
midbrain nucleus | 1.48e-09 | 3 |
neural nucleus | 1.48e-09 | 3 |
nucleus of brain | 1.48e-09 | 3 |
raphe nuclei | 1.69e-09 | 3 |
reticular formation | 1.69e-09 | 3 |
spleen | 2.57e-08 | 6 |
cavity lining | 2.57e-08 | 6 |
serous membrane | 2.57e-08 | 6 |
gastrointestinal system mesentery | 2.57e-08 | 6 |
stomach region | 2.57e-08 | 6 |
mesentery | 2.57e-08 | 6 |
gastrointestinal system serosa | 2.57e-08 | 6 |
mesentery of stomach | 2.57e-08 | 6 |
gut mesentery | 2.57e-08 | 6 |
dorsal mesentery | 2.57e-08 | 6 |
dorsal mesogastrium | 2.57e-08 | 6 |
peritoneal cavity | 2.57e-08 | 6 |
spleen primordium | 2.57e-08 | 6 |
intraembryonic coelom | 2.46e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.