FFCP PHASE1:Mm9::chr1:193645355..193645368,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr1:193645355..193645368,+ | |id=chr1:193645355..193645368,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.79e-07,3;CL:0000351,3.79e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002323,6.76e-08,37;UBERON:0004458,6.76e-08,37;UBERON:0000473,7.62e-08,14;UBERON:0003886,1.36e-07,38;UBERON:0002553,2.62e-07,39;UBERON:0003135,3.26e-07,15;UBERON:0002106,3.33e-07,6;UBERON:0004457,3.33e-07,6;UBERON:0000042,3.33e-07,6;UBERON:0004854,3.33e-07,6;UBERON:0009034,3.33e-07,6;UBERON:0002095,3.33e-07,6;UBERON:0004782,3.33e-07,6;UBERON:0003281,3.33e-07,6;UBERON:0009664,3.33e-07,6;UBERON:0002296,3.33e-07,6;UBERON:0005602,3.33e-07,6;UBERON:0001179,3.33e-07,6;UBERON:0006293,3.33e-07,6;UBERON:0000358,3.79e-07,3;UBERON:0000307,3.79e-07,3;UBERON:0007010,3.79e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0.999329285446988,1.41732687172878,2.09868563438444,0,0.137114433605739,0.84877930359606,4.16712121740242,0.297872853602656,1.30599894569468,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0.504060259519861,0.665191531965914,0,1.23012957516914,0,0.866554859253824,0.831173226792462,0.612508068787107,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0.971020706062307,0.251793635951155,0,0.367093504323363,0.782391344348039,0.65407546914134,0.219686182734472,0,0.419959264876088,0,0,0,0.336093799142464,0.771778308107841,0,0,0.202316460859598,0,0,0.677689064138264,0,0.449949858640699,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,0,0.220868540951614,0.244981598429908,0.383381884072945,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0.142371680799103,0,0.075726193333184,0.831287161174641,0,0,0,0,0,0,0.421333260395256,1.36344258062446,1.81850203222008,0,0,0,0,0,1.29894624606728,1.01343946190039,0.505524445014783,0.68510327831436,0.517875767294343,0,0.520455980298408,0,0.691846491768175,0,0.23517741427141,0.251333182659351,0,0,0.884610551949874,0.808834249737046,0.662524555381181,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0.479260498023681,0,1.14363204365758,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0.162241263067758,0.916554274652847,0.746441823660558,0.252722758433675,0,0.390361328888111,0.689706313300419,0.720248519221397,0.150704817835715,0.612328492361951,0.384341160854549,0.187403449119458,0.258703370739016,0.431135985865684,0.567318240503458,0.703804496655795,0.876782929710299,0.556094498451196,0.696504333044333,0.61734640922383,0.199034266818493,0.702213187313235,0.257347907114715,0,0.414251545071004,0.938104239924385,1.2604344302271,0.23674473558521,0.983821158737019,0.308534225774757,0.232533944750408,0.268273401399619,0.583826711835847,0.329119699826961,0.492502392237286,0,0,0.219550115291051,0.134206418760372,0.210289948564127,0.411618449517138,0,0,1.06644125267617,0.464473343720877,0.38660238396628,0.201683524623343,0.667134131534611,0.760902504450237,1.42358718463353,0,0.754005626400808,0.795825888164603,0.19496408711912,0,0.216138049874694,0.199141273254367,1.13800740571849,0.913988100877831,1.1270773567308,0.203651327845314,0.193952487167626,0.420814919341911,0.505892296994058,0,0,0.246794327843601,0,1.16791574001266,1.37591296579242,1.34917267430912,1.01430060694251,0.72353147925725,0.25462585178142,0,0.648540907100142,0.823684239564244,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0,0,0,0.568474235311454,0.651859905768103,1.35796068620151,0.704070744865506,0.502518772325447,0.714130922658041,0.390267295715598,0.630540576424764,0,0,0.163863314715738,0.518054945597687,0.433947175744535,0,0,2.45882136509518,0,0,0,0.655739781506702,0,0.315508219416257,1.56175497718655,0.215423397732799,0.477937595905104,0.222798674082394,0,1.21443210502468,0.584511715822624,0.790575555893047,0,0.283880170416537,0.178065603667255,0.325773918707152,0,0,1.94224508923985,0.604647113929502,0.754420319023592,0.885905678642318,0.307435147943927,0,0.727067458955011,1.06949213515416,0,0,0,0,1.08036656418786,0.129358683782755,0.428674070063185,0.532020700926821,0.891844088010353,0.329098041204242,0,0.938686832254841,0.21183207086382,0,0.65954501176592,0.645857706783622,1.20625849856312,0.835606408021955,0.492422699235184,0.291480836629851,0,1.36696704638282,1.03193433981611,0.370389054739423,1.31857919903284,1.50363650493128,1.37266903923914,0.339956859987711,0.419854356970974,0.552799895217695,0,0.632671987162271,0.813277868507395,0.432021363287205,0,0.218362563746178,0.134864346384821,0.495920734352016,0,0.648074866458964,0,17.4744810992099,1.49516546043979,0.827292452285488,1.36115831840833,0.258319646955462,1.35164900392623,1.29092962510329,0.781226309063701,2.20204623293993,12.0792060413003,12.3852902690882,0.632022241256357,0.608175645870493,1.33524244314275,0.51968329191118,0.716106782669926,0.596044064343795,1.20195449519969,0.443068581523732,1.71642964911851,1.67654974641,1.20991422164209,0.779663045918019,1.15454209968395,0.818138315270983,0,2.66383144048878,6.45939767588225,2.68615386182526,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0.93408612825759,0.399024873401031,0.682934423016537,0.729320151204882,0.628839487883947,0.551530525350042,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.565879024158229,0.468207537349412,0.512201219238954,0.689225627467359,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.294397840268795,1.71434626192708,0.532427418478012,0.238436189947321,0.145346416632329,1.03520318456864,0.0846146078916765,0.365855945745545,0.263069711437843,0.407412341537585,0,0.593175090620871,0.394017929502254,0,0.309873682371932,0.578719832943424,0,0.701794825336225,0.429742108096597,0.382576664137687,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0.999329285446988,1.41732687172878,2.09868563438444,0,0.137114433605739,0.84877930359606,4.16712121740242,0.297872853602656,1.30599894569468,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0.504060259519861,0.665191531965914,0,1.23012957516914,0,0.866554859253824,0.831173226792462,0.612508068787107,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0.971020706062307,0.251793635951155,0,0.367093504323363,0.782391344348039,0.65407546914134,0.219686182734472,0,0.419959264876088,0,0,0,0.336093799142464,0.771778308107841,0,0,0.202316460859598,0,0,0.677689064138264,0,0.449949858640699,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,0,0.220868540951614,0.244981598429908,0.383381884072945,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0.142371680799103,0,0.075726193333184,0.831287161174641,0,0,0,0,0,0,0.421333260395256,1.36344258062446,1.81850203222008,0,0,0,0,0,1.29894624606728,1.01343946190039,0.505524445014783,0.68510327831436,0.517875767294343,0,0.520455980298408,0,0.691846491768175,0,0.23517741427141,0.251333182659351,0,0,0.884610551949874,0.808834249737046,0.662524555381181,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0.479260498023681,0,1.14363204365758,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0.162241263067758,0.916554274652847,0.746441823660558,0.252722758433675,0,0.390361328888111,0.689706313300419,0.720248519221397,0.150704817835715,0.612328492361951,0.384341160854549,0.187403449119458,0.258703370739016,0.431135985865684,0.567318240503458,0.703804496655795,0.876782929710299,0.556094498451196,0.696504333044333,0.61734640922383,0.199034266818493,0.702213187313235,0.257347907114715,0,0.414251545071004,0.938104239924385,1.2604344302271,0.23674473558521,0.983821158737019,0.308534225774757,0.232533944750408,0.268273401399619,0.583826711835847,0.329119699826961,0.492502392237286,0,0,0.219550115291051,0.134206418760372,0.210289948564127,0.411618449517138,0,0,1.06644125267617,0.464473343720877,0.38660238396628,0.201683524623343,0.667134131534611,0.760902504450237,1.42358718463353,0,0.754005626400808,0.795825888164603,0.19496408711912,0,0.216138049874694,0.199141273254367,1.13800740571849,0.913988100877831,1.1270773567308,0.203651327845314,0.193952487167626,0.420814919341911,0.505892296994058,0,0,0.246794327843601,0,1.16791574001266,1.37591296579242,1.34917267430912,1.01430060694251,0.72353147925725,0.25462585178142,0,0.648540907100142,0.823684239564244,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0,0,0,0.568474235311454,0.651859905768103,1.35796068620151,0.704070744865506,0.502518772325447,0.714130922658041,0.390267295715598,0.630540576424764,0,0,0.163863314715738,0.518054945597687,0.433947175744535,0,0,2.45882136509518,0,0,0,0.655739781506702,0,0.315508219416257,1.56175497718655,0.215423397732799,0.477937595905104,0.222798674082394,0,1.21443210502468,0.584511715822624,0.790575555893047,0,0.283880170416537,0.178065603667255,0.325773918707152,0,0,1.94224508923985,0.604647113929502,0.754420319023592,0.885905678642318,0.307435147943927,0,0.727067458955011,1.06949213515416,0,0,0,0,1.08036656418786,0.129358683782755,0.428674070063185,0.532020700926821,0.891844088010353,0.329098041204242,0,0.938686832254841,0.21183207086382,0,0.65954501176592,0.645857706783622,1.20625849856312,0.835606408021955,0.492422699235184,0.291480836629851,0,1.36696704638282,1.03193433981611,0.370389054739423,1.31857919903284,1.50363650493128,1.37266903923914,0.339956859987711,0.419854356970974,0.552799895217695,0,0.632671987162271,0.813277868507395,0.432021363287205,0,0.218362563746178,0.134864346384821,0.495920734352016,0,0.648074866458964,0,17.4744810992099,1.49516546043979,0.827292452285488,1.36115831840833,0.258319646955462,1.35164900392623,1.29092962510329,0.781226309063701,2.20204623293993,12.0792060413003,12.3852902690882,0.632022241256357,0.608175645870493,1.33524244314275,0.51968329191118,0.716106782669926,0.596044064343795,1.20195449519969,0.443068581523732,1.71642964911851,1.67654974641,1.20991422164209,0.779663045918019,1.15454209968395,0.818138315270983,0,2.66383144048878,6.45939767588225,2.68615386182526,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0.93408612825759,0.399024873401031,0.682934423016537,0.729320151204882,0.628839487883947,0.551530525350042,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.565879024158229,0.468207537349412,0.512201219238954,0.689225627467359,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.294397840268795,1.71434626192708,0.532427418478012,0.238436189947321,0.145346416632329,1.03520318456864,0.0846146078916765,0.365855945745545,0.263069711437843,0.407412341537585,0,0.593175090620871,0.394017929502254,0,0.309873682371932,0.578719832943424,0,0.701794825336225,0.429742108096597,0.382576664137687,0,0 | ||
|short_description=p2@Nek2 | |short_description=p2@Nek2 | ||
}} | }} |
Revision as of 18:18, 14 November 2012
Short description: | p2@Nek2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nek2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 3bp_to_NM_010892, uc007ecw.2, uc007ecx.2_5end |
EntrezGene: | Nek2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.79e-07 | 3 |
trophoblast cell | 3.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
body cavity | 6.76e-08 | 37 |
body cavity or lining | 6.76e-08 | 37 |
testis | 7.62e-08 | 14 |
body cavity precursor | 1.36e-07 | 38 |
anatomical cavity | 2.62e-07 | 39 |
male reproductive organ | 3.26e-07 | 15 |
spleen | 3.33e-07 | 6 |
cavity lining | 3.33e-07 | 6 |
serous membrane | 3.33e-07 | 6 |
gastrointestinal system mesentery | 3.33e-07 | 6 |
stomach region | 3.33e-07 | 6 |
mesentery | 3.33e-07 | 6 |
gastrointestinal system serosa | 3.33e-07 | 6 |
mesentery of stomach | 3.33e-07 | 6 |
gut mesentery | 3.33e-07 | 6 |
dorsal mesentery | 3.33e-07 | 6 |
dorsal mesogastrium | 3.33e-07 | 6 |
peritoneal cavity | 3.33e-07 | 6 |
spleen primordium | 3.33e-07 | 6 |
blastocyst | 3.79e-07 | 3 |
blastula | 3.79e-07 | 3 |
cleaving embryo | 3.79e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.