FFCP PHASE1:Mm9::chr12:47797986..47798011,-: Difference between revisions
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|id=chr12:47797986..47798011,- | |id=chr12:47797986..47798011,- | ||
|ontology_enrichment_celltype=CL:0000117!1.33e-22!23;CL:0000337!1.33e-22!23;CL:0000540!2.46e-14!33;CL:0000047!2.46e-14!33;CL:0000031!2.46e-14!33;CL:0000404!2.46e-14!33;CL:0000393!1.97e-11!39;CL:0000211!1.97e-11!39;CL:0002319!3.32e-11!43;CL:0000221!7.62e-11!44;CL:0000133!7.62e-11!44;CL:0000055!5.46e-09!50;CL:0002612!1.21e-07!3;CL:0002610!1.94e-07!3;CL:0002613!5.12e-07!3 | |ontology_enrichment_celltype=CL:0000117!1.33e-22!23;CL:0000337!1.33e-22!23;CL:0000540!2.46e-14!33;CL:0000047!2.46e-14!33;CL:0000031!2.46e-14!33;CL:0000404!2.46e-14!33;CL:0000393!1.97e-11!39;CL:0000211!1.97e-11!39;CL:0002319!3.32e-11!43;CL:0000221!7.62e-11!44;CL:0000133!7.62e-11!44;CL:0000055!5.46e-09!50;CL:0002612!1.21e-07!3;CL:0002610!1.94e-07!3;CL:0002613!5.12e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002612,7.35e-53,3;CL:0002610,6.68e-24,3;CL:0000117,1.61e-19,23;CL:0000337,1.61e-19,23;CL:0000540,8.03e-14,33;CL:0000047,8.03e-14,33;CL:0000031,8.03e-14,33;CL:0000404,8.03e-14,33;CL:0000393,8.52e-12,39;CL:0000211,8.52e-12,39;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!6.11e-21!34;UBERON:0001017!1.21e-20!73;UBERON:0005743!1.21e-20!73;UBERON:0000073!7.15e-20!75;UBERON:0001016!7.15e-20!75;UBERON:0001049!1.20e-19!52;UBERON:0005068!1.20e-19!52;UBERON:0006241!1.20e-19!52;UBERON:0007135!1.20e-19!52;UBERON:0004121!9.49e-17!102;UBERON:0000924!9.49e-17!102;UBERON:0006601!9.49e-17!102;UBERON:0002346!3.20e-16!71;UBERON:0003075!3.20e-16!71;UBERON:0007284!3.20e-16!71;UBERON:0002616!8.42e-16!49;UBERON:0000955!2.31e-15!50;UBERON:0006238!2.31e-15!50;UBERON:0002791!1.97e-13!29;UBERON:0003528!1.97e-13!29;UBERON:0001893!1.97e-13!29;UBERON:0000033!2.43e-13!63;UBERON:0002240!1.29e-12!6;UBERON:0005174!1.29e-12!6;UBERON:0001137!1.29e-12!6;UBERON:0003080!1.96e-11!40;UBERON:0001948!6.50e-11!5;UBERON:0002315!6.50e-11!5;UBERON:0003056!7.73e-11!49;UBERON:0002780!2.31e-10!39;UBERON:0001890!2.31e-10!39;UBERON:0006240!2.31e-10!39;UBERON:0003076!5.58e-10!12;UBERON:0003057!5.58e-10!12;UBERON:0002420!1.75e-08!8;UBERON:0007245!1.75e-08!8;UBERON:0010009!1.75e-08!8;UBERON:0010011!1.75e-08!8;UBERON:0000454!1.75e-08!8;UBERON:0007811!4.27e-08!86;UBERON:0002298!4.37e-08!6;UBERON:0002619!1.16e-07!17;UBERON:0002257!1.21e-07!3;UBERON:0004684!1.94e-07!3;UBERON:0002275!1.94e-07!3;UBERON:0000956!3.34e-07!21;UBERON:0001869!3.34e-07!21;UBERON:0000203!3.34e-07!21;UBERON:0000153!6.71e-07!94 | |ontology_enrichment_uberon=UBERON:0002020!6.11e-21!34;UBERON:0001017!1.21e-20!73;UBERON:0005743!1.21e-20!73;UBERON:0000073!7.15e-20!75;UBERON:0001016!7.15e-20!75;UBERON:0001049!1.20e-19!52;UBERON:0005068!1.20e-19!52;UBERON:0006241!1.20e-19!52;UBERON:0007135!1.20e-19!52;UBERON:0004121!9.49e-17!102;UBERON:0000924!9.49e-17!102;UBERON:0006601!9.49e-17!102;UBERON:0002346!3.20e-16!71;UBERON:0003075!3.20e-16!71;UBERON:0007284!3.20e-16!71;UBERON:0002616!8.42e-16!49;UBERON:0000955!2.31e-15!50;UBERON:0006238!2.31e-15!50;UBERON:0002791!1.97e-13!29;UBERON:0003528!1.97e-13!29;UBERON:0001893!1.97e-13!29;UBERON:0000033!2.43e-13!63;UBERON:0002240!1.29e-12!6;UBERON:0005174!1.29e-12!6;UBERON:0001137!1.29e-12!6;UBERON:0003080!1.96e-11!40;UBERON:0001948!6.50e-11!5;UBERON:0002315!6.50e-11!5;UBERON:0003056!7.73e-11!49;UBERON:0002780!2.31e-10!39;UBERON:0001890!2.31e-10!39;UBERON:0006240!2.31e-10!39;UBERON:0003076!5.58e-10!12;UBERON:0003057!5.58e-10!12;UBERON:0002420!1.75e-08!8;UBERON:0007245!1.75e-08!8;UBERON:0010009!1.75e-08!8;UBERON:0010011!1.75e-08!8;UBERON:0000454!1.75e-08!8;UBERON:0007811!4.27e-08!86;UBERON:0002298!4.37e-08!6;UBERON:0002619!1.16e-07!17;UBERON:0002257!1.21e-07!3;UBERON:0004684!1.94e-07!3;UBERON:0002275!1.94e-07!3;UBERON:0000956!3.34e-07!21;UBERON:0001869!3.34e-07!21;UBERON:0000203!3.34e-07!21;UBERON:0000153!6.71e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002257,7.35e-53,3;UBERON:0001948,3.68e-32,5;UBERON:0002315,3.68e-32,5;UBERON:0002240,5.66e-27,6;UBERON:0005174,5.66e-27,6;UBERON:0001137,5.66e-27,6;UBERON:0004684,6.68e-24,3;UBERON:0002275,6.68e-24,3;UBERON:0003076,5.92e-14,12;UBERON:0003057,5.92e-14,12;UBERON:0000073,1.10e-08,54;UBERON:0000489,2.58e-08,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0.0958454710182364,0.919218786610021,1.10115880999389,0.638436690425939,1.53606533256243,0.395658863190582,0.640413505216868,0.52091337055676,0.279182999001381,0,0.45839474333043,5.89257170947335,3.98640706237488,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0,0.324482526135515,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.192075457214608,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0,0,0.271608227691724,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0.0958454710182364,0.919218786610021,1.10115880999389,0.638436690425939,1.53606533256243,0.395658863190582,0.640413505216868,0.52091337055676,0.279182999001381,0,0.45839474333043,5.89257170947335,3.98640706237488,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0,0.324482526135515,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.192075457214608,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0,0,0.271608227691724,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr12:47797986..47798011,- | |short_description=p@chr12:47797986..47798011,- | ||
}} | }} |
Revision as of 06:55, 14 November 2012
Short description: | p@chr12:47797986..47798011, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:47797986..47798011, - |
Coexpression cluster: | MCL_coexpression_mm9:438 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 7.35e-53 | 3 |
raphe nuclei neuron | 6.68e-24 | 3 |
CNS neuron (sensu Vertebrata) | 1.61e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.61e-19 | 23 |
neuron | 8.03e-14 | 33 |
neuronal stem cell | 8.03e-14 | 33 |
neuroblast | 8.03e-14 | 33 |
electrically signaling cell | 8.03e-14 | 33 |
electrically responsive cell | 8.52e-12 | 39 |
electrically active cell | 8.52e-12 | 39 |
neural cell | 9.33e-11 | 43 |
ectodermal cell | 1.59e-10 | 44 |
neurectodermal cell | 1.59e-10 | 44 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
ventral horn of spinal cord | 7.35e-53 | 3 |
regional part of spinal cord | 3.68e-32 | 5 |
gray matter of spinal cord | 3.68e-32 | 5 |
spinal cord | 5.66e-27 | 6 |
dorsal region element | 5.66e-27 | 6 |
dorsum | 5.66e-27 | 6 |
raphe nuclei | 6.68e-24 | 3 |
reticular formation | 6.68e-24 | 3 |
posterior neural tube | 5.92e-14 | 12 |
chordal neural plate | 5.92e-14 | 12 |
regional part of nervous system | 1.10e-08 | 54 |
cavitated compound organ | 2.58e-08 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.