FFCP PHASE1:Mm9::chr6:117856954..117857026,+: Difference between revisions
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|id=chr6:117856954..117857026,+ | |id=chr6:117856954..117857026,+ | ||
|ontology_enrichment_celltype=CL:0000063!2.62e-11!66;CL:0002320!4.89e-09!46;CL:0000134!4.89e-09!46;CL:0000838!1.91e-08!12;CL:0000738!2.62e-08!17;CL:0002087!2.62e-08!17;CL:0000988!6.44e-08!32;CL:0002032!6.44e-08!32;CL:0000037!6.44e-08!32;CL:0000566!6.44e-08!32;CL:0000837!6.44e-08!32;CL:0000084!7.77e-08!11;CL:0000827!7.77e-08!11;CL:0000219!9.73e-08!54;CL:0000542!5.48e-07!13;CL:0000051!5.48e-07!13;CL:0000791!8.65e-07!9;CL:0000789!8.65e-07!9;CL:0002420!8.65e-07!9;CL:0002419!8.65e-07!9;CL:0000790!8.65e-07!9 | |ontology_enrichment_celltype=CL:0000063!2.62e-11!66;CL:0002320!4.89e-09!46;CL:0000134!4.89e-09!46;CL:0000838!1.91e-08!12;CL:0000738!2.62e-08!17;CL:0002087!2.62e-08!17;CL:0000988!6.44e-08!32;CL:0002032!6.44e-08!32;CL:0000037!6.44e-08!32;CL:0000566!6.44e-08!32;CL:0000837!6.44e-08!32;CL:0000084!7.77e-08!11;CL:0000827!7.77e-08!11;CL:0000219!9.73e-08!54;CL:0000542!5.48e-07!13;CL:0000051!5.48e-07!13;CL:0000791!8.65e-07!9;CL:0000789!8.65e-07!9;CL:0002420!8.65e-07!9;CL:0002419!8.65e-07!9;CL:0000790!8.65e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002320,4.89e-09,46;CL:0000134,4.89e-09,46;CL:0000838,1.91e-08,12;CL:0000738,2.62e-08,17;CL:0002087,2.62e-08,17;CL:0000988,6.44e-08,32;CL:0002032,6.44e-08,32;CL:0000037,6.44e-08,32;CL:0000837,6.44e-08,32;CL:0000084,7.77e-08,11;CL:0000827,7.77e-08,11;CL:0000219,9.73e-08,54;CL:0000542,5.48e-07,13;CL:0000051,5.48e-07,13;CL:0000791,8.65e-07,9;CL:0000789,8.65e-07,9;CL:0002420,8.65e-07,9;CL:0002419,8.65e-07,9;CL:0000790,8.65e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.89e-09!46;UBERON:0004119!2.82e-07!130;UBERON:0000925!2.82e-07!130;UBERON:0006595!2.82e-07!130;UBERON:0001007!3.17e-07!128;UBERON:0001555!3.17e-07!128;UBERON:0007026!3.17e-07!128;UBERON:0002204!7.09e-07!32 | |ontology_enrichment_uberon=UBERON:0002384!4.89e-09!46;UBERON:0004119!2.82e-07!130;UBERON:0000925!2.82e-07!130;UBERON:0006595!2.82e-07!130;UBERON:0001007!3.17e-07!128;UBERON:0001555!3.17e-07!128;UBERON:0007026!3.17e-07!128;UBERON:0002204!7.09e-07!32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.89e-09,46;UBERON:0004119,5.94e-08,118;UBERON:0000925,5.94e-08,118;UBERON:0006595,5.94e-08,118;UBERON:0001007,6.53e-08,116;UBERON:0001555,6.53e-08,116;UBERON:0007026,6.53e-08,116;UBERON:0005409,7.90e-08,47;UBERON:0004921,2.62e-07,114;UBERON:0002204,7.09e-07,32;UBERON:0000160,8.49e-07,31 | |||
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| ||
|short_description=p5@Hnrnpf | |short_description=p5@Hnrnpf | ||
}} | }} |
Revision as of 06:26, 14 November 2012
Short description: | p5@Hnrnpf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Hnrnpf_5end |
Coexpression cluster: | MCL_coexpression_mm9:710 |
Association with transcript: | 154bp_to_ENSMUST00000163168, ENSMUST00000170346, NM_001166430, NM_001166431, uc009dlf.2, uc012eqy.1_5end |
EntrezGene: | Hnrnpf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 4.89e-09 | 46 |
mesenchymal cell | 4.89e-09 | 46 |
lymphoid lineage restricted progenitor cell | 1.91e-08 | 12 |
leukocyte | 2.62e-08 | 17 |
nongranular leukocyte | 2.62e-08 | 17 |
hematopoietic cell | 6.44e-08 | 32 |
hematopoietic oligopotent progenitor cell | 6.44e-08 | 32 |
hematopoietic stem cell | 6.44e-08 | 32 |
hematopoietic multipotent progenitor cell | 6.44e-08 | 32 |
T cell | 7.77e-08 | 11 |
pro-T cell | 7.77e-08 | 11 |
motile cell | 9.73e-08 | 54 |
lymphocyte | 5.48e-07 | 13 |
common lymphoid progenitor | 5.48e-07 | 13 |
mature alpha-beta T cell | 8.65e-07 | 9 |
alpha-beta T cell | 8.65e-07 | 9 |
immature T cell | 8.65e-07 | 9 |
mature T cell | 8.65e-07 | 9 |
immature alpha-beta T cell | 8.65e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.89e-09 | 46 |
endoderm-derived structure | 5.94e-08 | 118 |
endoderm | 5.94e-08 | 118 |
presumptive endoderm | 5.94e-08 | 118 |
digestive system | 6.53e-08 | 116 |
digestive tract | 6.53e-08 | 116 |
primitive gut | 6.53e-08 | 116 |
gastrointestinal system | 7.90e-08 | 47 |
subdivision of digestive tract | 2.62e-07 | 114 |
musculoskeletal system | 7.09e-07 | 32 |
intestine | 8.49e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.