FFCP PHASE1:Mm9::chr15:98918857..98918860,-: Difference between revisions
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|id=chr15:98918857..98918860,- | |id=chr15:98918857..98918860,- | ||
|ontology_enrichment_celltype=CL:0000117!5.95e-14!23;CL:0000337!5.95e-14!23;CL:0000540!1.04e-07!33;CL:0000047!1.04e-07!33;CL:0000031!1.04e-07!33;CL:0000404!1.04e-07!33;CL:0000393!4.03e-07!39;CL:0000211!4.03e-07!39 | |ontology_enrichment_celltype=CL:0000117!5.95e-14!23;CL:0000337!5.95e-14!23;CL:0000540!1.04e-07!33;CL:0000047!1.04e-07!33;CL:0000031!1.04e-07!33;CL:0000404!1.04e-07!33;CL:0000393!4.03e-07!39;CL:0000211!4.03e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.25e-27,23;CL:0000337,5.25e-27,23;CL:0000540,7.92e-18,33;CL:0000047,7.92e-18,33;CL:0000031,7.92e-18,33;CL:0000404,7.92e-18,33;CL:0000393,1.40e-14,39;CL:0000211,1.40e-14,39;CL:0002319,6.38e-13,43;CL:0000221,1.49e-12,44;CL:0000133,1.49e-12,44;CL:0000120,1.08e-10,3;CL:0002613,6.61e-10,3;CL:0002610,1.22e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.06e-12,73;UBERON:0000073,2.43e-12,54;UBERON:0001016,5.76e-12,75;UBERON:0004121,1.03e-10,95;UBERON:0000924,1.03e-10,95;UBERON:0006601,1.03e-10,95;UBERON:0004684,1.22e-09,3;UBERON:0002275,1.22e-09,3;UBERON:0001948,1.41e-09,5;UBERON:0002315,1.41e-09,5;UBERON:0002420,2.06e-09,8;UBERON:0007245,2.06e-09,8;UBERON:0010009,2.06e-09,8;UBERON:0010011,2.06e-09,8;UBERON:0000454,2.06e-09,8;UBERON:0002346,2.37e-08,64;UBERON:0003075,2.37e-08,64;UBERON:0007284,2.37e-08,64;UBERON:0001049,2.64e-08,52;UBERON:0005068,2.64e-08,52;UBERON:0006241,2.64e-08,52;UBERON:0007135,2.64e-08,52;UBERON:0003076,4.25e-08,12;UBERON:0003057,4.25e-08,12;UBERON:0002240,5.47e-08,6;UBERON:0005174,5.47e-08,6;UBERON:0001137,5.47e-08,6;UBERON:0002950,2.05e-07,4;UBERON:0001891,2.05e-07,4;UBERON:0009616,2.05e-07,4;UBERON:0010286,2.05e-07,4;UBERON:0010371,6.41e-07,73 | |||
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|short_description=p@chr15:98918857..98918860,- | |short_description=p@chr15:98918857..98918860,- | ||
}} | }} |
Revision as of 00:09, 14 November 2012
Short description: | p@chr15:98918857..98918860, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:98918857..98918860, - |
Coexpression cluster: | MCL_coexpression_mm9:224 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.25e-27 | 23 |
neuroblast (sensu Vertebrata) | 5.25e-27 | 23 |
neuron | 7.92e-18 | 33 |
neuronal stem cell | 7.92e-18 | 33 |
neuroblast | 7.92e-18 | 33 |
electrically signaling cell | 7.92e-18 | 33 |
electrically responsive cell | 1.40e-14 | 39 |
electrically active cell | 1.40e-14 | 39 |
neural cell | 6.38e-13 | 43 |
ectodermal cell | 1.49e-12 | 44 |
neurectodermal cell | 1.49e-12 | 44 |
granule cell | 1.08e-10 | 3 |
striatum neuron | 6.61e-10 | 3 |
raphe nuclei neuron | 1.22e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.06e-12 | 73 |
regional part of nervous system | 2.43e-12 | 54 |
nervous system | 5.76e-12 | 75 |
ectoderm-derived structure | 1.03e-10 | 95 |
ectoderm | 1.03e-10 | 95 |
presumptive ectoderm | 1.03e-10 | 95 |
raphe nuclei | 1.22e-09 | 3 |
reticular formation | 1.22e-09 | 3 |
regional part of spinal cord | 1.41e-09 | 5 |
gray matter of spinal cord | 1.41e-09 | 5 |
basal ganglion | 2.06e-09 | 8 |
nuclear complex of neuraxis | 2.06e-09 | 8 |
aggregate regional part of brain | 2.06e-09 | 8 |
collection of basal ganglia | 2.06e-09 | 8 |
cerebral subcortex | 2.06e-09 | 8 |
neurectoderm | 2.37e-08 | 64 |
neural plate | 2.37e-08 | 64 |
presumptive neural plate | 2.37e-08 | 64 |
neural tube | 2.64e-08 | 52 |
neural rod | 2.64e-08 | 52 |
future spinal cord | 2.64e-08 | 52 |
neural keel | 2.64e-08 | 52 |
posterior neural tube | 4.25e-08 | 12 |
chordal neural plate | 4.25e-08 | 12 |
spinal cord | 5.47e-08 | 6 |
dorsal region element | 5.47e-08 | 6 |
dorsum | 5.47e-08 | 6 |
regional part of midbrain | 2.05e-07 | 4 |
midbrain | 2.05e-07 | 4 |
presumptive midbrain | 2.05e-07 | 4 |
midbrain neural tube | 2.05e-07 | 4 |
ecto-epithelium | 6.41e-07 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.