FFCP PHASE1:Mm9::chr2:181498020..181498040,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr2:181498020..181498040,+ | |id=chr2:181498020..181498040,+ | ||
|ontology_enrichment_celltype=CL:0000540!6.80e-13!33;CL:0000047!6.80e-13!33;CL:0000031!6.80e-13!33;CL:0000404!6.80e-13!33;CL:0000221!1.91e-10!44;CL:0000133!1.91e-10!44;CL:0002319!9.04e-10!43;CL:0000393!1.16e-09!39;CL:0000211!1.16e-09!39;CL:0000107!4.75e-09!9;CL:0002609!8.44e-08!6;CL:0000055!2.79e-07!50 | |ontology_enrichment_celltype=CL:0000540!6.80e-13!33;CL:0000047!6.80e-13!33;CL:0000031!6.80e-13!33;CL:0000404!6.80e-13!33;CL:0000221!1.91e-10!44;CL:0000133!1.91e-10!44;CL:0002319!9.04e-10!43;CL:0000393!1.16e-09!39;CL:0000211!1.16e-09!39;CL:0000107!4.75e-09!9;CL:0002609!8.44e-08!6;CL:0000055!2.79e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.61e-23,33;CL:0000047,2.61e-23,33;CL:0000031,2.61e-23,33;CL:0000404,2.61e-23,33;CL:0000221,2.65e-20,44;CL:0000133,2.65e-20,44;CL:0000393,4.96e-19,39;CL:0000211,4.96e-19,39;CL:0002319,8.49e-19,43;CL:0002609,5.97e-16,6;CL:0000107,7.37e-12,9;CL:0000117,1.05e-11,23;CL:0000337,1.05e-11,23;CL:0002321,5.92e-11,70;CL:0002608,2.80e-09,3;CL:0000120,1.56e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.66e-11!102;UBERON:0000924!1.66e-11!102;UBERON:0006601!1.66e-11!102;UBERON:0002346!4.13e-09!71;UBERON:0003075!4.13e-09!71;UBERON:0007284!4.13e-09!71;UBERON:0002410!4.75e-09!9;UBERON:0001017!8.31e-09!73;UBERON:0005743!8.31e-09!73;UBERON:0000073!2.77e-08!75;UBERON:0001016!2.77e-08!75;UBERON:0003056!1.01e-07!49;UBERON:0000033!2.21e-07!63;UBERON:0000020!4.40e-07!12;UBERON:0001032!4.40e-07!12;UBERON:0004456!4.40e-07!12;UBERON:0000010!6.42e-07!11 | |ontology_enrichment_uberon=UBERON:0004121!1.66e-11!102;UBERON:0000924!1.66e-11!102;UBERON:0006601!1.66e-11!102;UBERON:0002346!4.13e-09!71;UBERON:0003075!4.13e-09!71;UBERON:0007284!4.13e-09!71;UBERON:0002410!4.75e-09!9;UBERON:0001017!8.31e-09!73;UBERON:0005743!8.31e-09!73;UBERON:0000073!2.77e-08!75;UBERON:0001016!2.77e-08!75;UBERON:0003056!1.01e-07!49;UBERON:0000033!2.21e-07!63;UBERON:0000020!4.40e-07!12;UBERON:0001032!4.40e-07!12;UBERON:0004456!4.40e-07!12;UBERON:0000010!6.42e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.90e-19,95;UBERON:0000924,4.90e-19,95;UBERON:0006601,4.90e-19,95;UBERON:0000020,4.52e-16,12;UBERON:0001032,4.52e-16,12;UBERON:0004456,4.52e-16,12;UBERON:0000033,1.06e-14,13;UBERON:0005085,1.06e-14,13;UBERON:0010371,2.19e-14,73;UBERON:0002346,5.22e-14,64;UBERON:0003075,5.22e-14,64;UBERON:0007284,5.22e-14,64;UBERON:0000970,1.22e-13,9;UBERON:0000019,1.22e-13,9;UBERON:0000047,1.22e-13,9;UBERON:0010312,1.22e-13,9;UBERON:0004088,1.22e-13,9;UBERON:0002104,1.22e-13,9;UBERON:0001456,1.22e-13,9;UBERON:0003072,1.22e-13,9;UBERON:0004128,1.22e-13,9;UBERON:0003071,1.22e-13,9;UBERON:0003056,6.76e-13,49;UBERON:0001017,1.06e-12,73;UBERON:0001016,3.19e-12,75;UBERON:0002410,7.37e-12,9;UBERON:0001444,5.86e-11,11;UBERON:0010314,2.76e-10,92;UBERON:0000010,1.57e-09,11;UBERON:0010313,2.90e-07,3;UBERON:0002342,2.90e-07,3;UBERON:0002005,2.90e-07,3;UBERON:0005428,2.90e-07,3;UBERON:0005062,2.90e-07,3 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,0,0,0.139986421625363,0,0,0,0,0,0,0,4.04632921719196,4.23192783417626,2.53532561402472,0,0,0,0,0,0,0,3.42175720617976,4.18518408828241,2.3135745748652,0,0.220868540951614,7.59442955132715,8.62609239164127,5.51531271966013,0,0,0,3.82470234417562,1.64677758484337,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83096445709685,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0,0,0.376999773989026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00523481690292,0,0.255715457330331,0.20778804455956,0,0,0,0,0,2.99277018814219,3.90833577536904,3.60124259610698,1.9591626318643,4.21826294738233,7.55870949680614,6.27801554550183,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823236899034275,0,0,0.213288250535234,0.464473343720877,0.38660238396628,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,1.26203287766503,2.34263246577983,1.29254038639679,0.955875191810208,2.00518806674155,1.69845918473299,0.809621403349789,2.04579100537918,3.55759000151871,0,0,0,0,0,0,1.94224508923985,1.81394134178851,1.50884063804718,0.295301892880773,0.922305443831782,0,0.727067458955011,0.712994756769443,0,0,0,0,1.98067203434441,1.4229455216103,0.857348140126369,0.709360934569094,0.713475270408282,0.658196082408484,0,0,0,0,0,0.645857706783622,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0.756037385752609,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08558003162466,7.18244772121856,1.70733605754134,0.243106717068294,0,0,0,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.448176066834085,0.0574354689556133,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0,0,0.423073039458382,0.914639864363863,0,0.135804113845862,0,0.474540072496697,0,0.818462086339379,0.464810523557898,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=2.88267924788629,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,0,0,0.139986421625363,0,0,0,0,0,0,0,4.04632921719196,4.23192783417626,2.53532561402472,0,0,0,0,0,0,0,3.42175720617976,4.18518408828241,2.3135745748652,0,0.220868540951614,7.59442955132715,8.62609239164127,5.51531271966013,0,0,0,3.82470234417562,1.64677758484337,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83096445709685,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0,0,0.376999773989026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00523481690292,0,0.255715457330331,0.20778804455956,0,0,0,0,0,2.99277018814219,3.90833577536904,3.60124259610698,1.9591626318643,4.21826294738233,7.55870949680614,6.27801554550183,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823236899034275,0,0,0.213288250535234,0.464473343720877,0.38660238396628,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,1.26203287766503,2.34263246577983,1.29254038639679,0.955875191810208,2.00518806674155,1.69845918473299,0.809621403349789,2.04579100537918,3.55759000151871,0,0,0,0,0,0,1.94224508923985,1.81394134178851,1.50884063804718,0.295301892880773,0.922305443831782,0,0.727067458955011,0.712994756769443,0,0,0,0,1.98067203434441,1.4229455216103,0.857348140126369,0.709360934569094,0.713475270408282,0.658196082408484,0,0,0,0,0,0.645857706783622,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0.756037385752609,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08558003162466,7.18244772121856,1.70733605754134,0.243106717068294,0,0,0,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.448176066834085,0.0574354689556133,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0,0,0.423073039458382,0.914639864363863,0,0.135804113845862,0,0.474540072496697,0,0.818462086339379,0.464810523557898,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p5@Myt1 | |short_description=p5@Myt1 | ||
}} | }} |
Revision as of 22:08, 13 November 2012
Short description: | p5@Myt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Myt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1720 |
Association with transcript: | 0bp_to_ENSMUST00000081125, NM_001171615, uc008onr.2_5end |
EntrezGene: | Myt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.61e-23 | 33 |
neuronal stem cell | 2.61e-23 | 33 |
neuroblast | 2.61e-23 | 33 |
electrically signaling cell | 2.61e-23 | 33 |
ectodermal cell | 2.65e-20 | 44 |
neurectodermal cell | 2.65e-20 | 44 |
electrically responsive cell | 4.96e-19 | 39 |
electrically active cell | 4.96e-19 | 39 |
neural cell | 8.49e-19 | 43 |
neuron of cerebral cortex | 5.97e-16 | 6 |
autonomic neuron | 7.37e-12 | 9 |
CNS neuron (sensu Vertebrata) | 1.05e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.05e-11 | 23 |
embryonic cell | 5.92e-11 | 70 |
hippocampal neuron | 2.80e-09 | 3 |
granule cell | 1.56e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.90e-19 | 95 |
ectoderm | 4.90e-19 | 95 |
presumptive ectoderm | 4.90e-19 | 95 |
sense organ | 4.52e-16 | 12 |
sensory system | 4.52e-16 | 12 |
entire sense organ system | 4.52e-16 | 12 |
head | 1.06e-14 | 13 |
ectodermal placode | 1.06e-14 | 13 |
ecto-epithelium | 2.19e-14 | 73 |
neurectoderm | 5.22e-14 | 64 |
neural plate | 5.22e-14 | 64 |
presumptive neural plate | 5.22e-14 | 64 |
eye | 1.22e-13 | 9 |
camera-type eye | 1.22e-13 | 9 |
simple eye | 1.22e-13 | 9 |
immature eye | 1.22e-13 | 9 |
ocular region | 1.22e-13 | 9 |
visual system | 1.22e-13 | 9 |
face | 1.22e-13 | 9 |
optic cup | 1.22e-13 | 9 |
optic vesicle | 1.22e-13 | 9 |
eye primordium | 1.22e-13 | 9 |
pre-chordal neural plate | 6.76e-13 | 49 |
central nervous system | 1.06e-12 | 73 |
nervous system | 3.19e-12 | 75 |
autonomic nervous system | 7.37e-12 | 9 |
subdivision of head | 5.86e-11 | 11 |
structure with developmental contribution from neural crest | 2.76e-10 | 92 |
peripheral nervous system | 1.57e-09 | 11 |
neural crest-derived structure | 2.90e-07 | 3 |
neural crest | 2.90e-07 | 3 |
enteric nervous system | 2.90e-07 | 3 |
vagal neural crest | 2.90e-07 | 3 |
neural fold | 2.90e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.