FFCP PHASE1:Mm9::chr3:127483227..127483256,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 7: | Line 7: | ||
|id=chr3:127483227..127483256,- | |id=chr3:127483227..127483256,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.90e-10,25;CL:0002076,5.90e-08,15;CL:0002563,6.89e-08,9;CL:0002251,6.89e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.37e-07!15 | |ontology_enrichment_uberon=UBERON:0000344!4.37e-07!15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.81e-17,31;UBERON:0005409,1.17e-15,47;UBERON:0001007,7.89e-11,116;UBERON:0001555,7.89e-11,116;UBERON:0007026,7.89e-11,116;UBERON:0004921,1.37e-10,114;UBERON:0004119,2.05e-10,118;UBERON:0000925,2.05e-10,118;UBERON:0006595,2.05e-10,118;UBERON:0000485,3.70e-09,11;UBERON:0003350,6.89e-08,9;UBERON:0004808,6.89e-08,9;UBERON:0001277,6.89e-08,9;UBERON:0001242,8.86e-08,13;UBERON:0001262,8.86e-08,13;UBERON:0004786,8.86e-08,13;UBERON:0000344,1.29e-07,15;UBERON:0000055,2.38e-07,5;UBERON:0007500,2.38e-07,5;UBERON:0001981,2.38e-07,5;UBERON:0002049,2.38e-07,5;UBERON:0007798,2.38e-07,5;UBERON:0004537,2.38e-07,5;UBERON:0006965,2.38e-07,5 | |||
|phase1_expression=1.92178616525753,4.53668029931169,5.0049916332849,0.90739263392049,1.00179145989269,2.51818907867835,2.10251376535973,0,0,0,0,0,0,0,0,0.607425802169478,0.699561878128147,0,0.274228867211478,0,0.850432901510698,0,0,0.799962113967033,1.37645568640302,2.29692785646008,3.01533397311352,1.50829862880122,3.23039813075836,1.76421090831952,0.886922042621219,0,0,0,2.88851619751275,2.32728503501889,3.47087905646027,2.09265815368454,0.7813353445238,0.523523743973798,1.17646297606203,0.683045484958446,0.971020706062307,5.66535680890098,6.79225439170748,5.32285581268876,0,0,0,0.194429899074283,0,0,0.167782606057736,0,0,0.771778308107841,1.71920063963254,1.03134418455488,0,0,0,0.338844532069132,0.889294796111139,0,0,1.4209602298922,0.599200221036809,0.384218305321555,0.207379224616955,0,0.210324961351382,0,0.220868540951614,0,0.0958454710182364,0,1.10115880999389,0.127687338085188,0,0,0.0914876436024097,0,0,0.56276261003168,0.763991238884051,0.294628585473668,0.142371680799103,0,0.075726193333184,0.302286240427142,4.34796733052517,0,0.679971333707751,0,0,0.448026887097336,1.12355536105401,4.09032774187339,1.81850203222008,1.41335829804136,1.12674735821344,5.13305909657271,2.54805239706646,0,0.432982082022428,0.760079596425296,1.51657333504435,0.91347103775248,2.33044095282455,2.52351636410202,0.346970653532272,0,0.922461989024234,0.904335843315735,0.470354828542819,0.753999547978053,0,2.02439099687876,0,0.323533699894818,0.441683036920787,0.969750506270444,3.72783522436244,0,0.209446706813455,4.59822699375465,0.479260498023681,0.599902730993408,0.127070227073065,1.04853447583376,0.457500602818626,0,0.521472960576829,0,0.20778804455956,0.324482526135515,0.101839363850316,0.995255764880744,0.758168275301024,0.841767423545896,0.390361328888111,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0,1.03481348295606,0,0,0.527853372491847,0,0.556094498451196,0.696504333044333,1.02891068203972,0.59710280045548,0.702213187313235,0.257347907114715,0.852490498186778,0,0,0.720248245844059,0,0,0.462801338662135,0,0.268273401399619,0,0.329119699826961,0.492502392237286,0.648550476366846,0.877199924551994,0.878200461164203,0.536825675041487,0.841159794256509,0.102904612379284,0.660837565967596,4.7601101999438,0,0.464473343720877,1.15980715189884,1.4117846723634,1.33426826306922,1.33157938278791,2.37264530772256,1.64698954724011,2.01068167040216,1.79060824837036,1.9496408711912,3.59527763461689,1.72910439899755,0.597423819763102,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.350679099451593,0.442655759869801,0.738050739898011,0,0.246794327843601,0.296452627087149,0,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0.575392274901621,0.162135226775035,0,1.43768206527355,0.744281895337007,0.624075346229121,0.252578877947112,0.358794827043824,0.482443521363367,3.69506380333209,0.189491411770485,0.488894929326078,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.472905432318573,0.8858587585951,0.637819074629948,1.96635977658886,0.690739927463582,1.44649058581512,1.50791283939272,2.17562273527484,0,0.827810238914197,0.80275294993896,0.117211686592203,0.819674726883377,0.252470927204373,0.315508219416257,0.390438744296638,0.861693590931196,0,0.891194696329576,0.283076530788832,0,0,1.18586333383957,0,1.13552068166615,0.35613120733451,1.14020871547503,2.3095817216155,2.65490276679926,0,0.302323556964751,0.377210159511796,0,0,0,0,0,0,0,0,3.40439605753788,0,0,0,0.709360934569094,0.713475270408282,0.987294123612726,0.608929898229199,0.469343416127421,0.21183207086382,0.220528398054962,2.63818004706368,0.484393280087717,0.241251699712623,0.716234064018819,1.31312719796049,2.04036585640896,0.927126510052548,0.683483523191411,0,0.370389054739423,0,0.683471138605126,0.686334519619568,0.169978429993855,0.559805809294632,0.138199973804424,0,0,0.813277868507395,0.972048067396211,1.67270636811575,2.18362563746178,1.61837215661785,2.47960367176008,2.35580347785627,1.8146096260851,3.10669656543463,0,0.149516546043979,0.165458490457098,0.388902376688095,0.129159823477731,0.675824501963113,0.352071715937262,0.13020438484395,0.943734099831398,0.483168241652012,0.864090018773596,1.26404448251271,1.01362607645082,1.74608627180206,0.909445760844565,0.895133478337407,0.79472541912506,0.480781798079875,0.590758108698309,1.11063094942962,0.457240839929999,0.504130925684203,0.682205165178267,0.384847366561318,1.05189211963412,4.98806843953465,0,0.0897138566094757,0,5.79568782096571,0.750729901804728,3.11357761254351,3.00115730710692,0,0,0,0,0.515559547031063,0.685082519770642,0.755393897389701,0,0,2.26571204492102,0,0,0.399024873401031,0,0.972426868273176,0.209613162627982,0,0.44449345560323,0,0,0,0.25347929989024,0.377252682772152,0.280924522409647,0.512201219238954,0.287177344778066,0,0.695305955669133,0.578727661391115,0.412085900803307,0.588795680537589,0.685738504770831,0.354951612318675,0.476872379894642,0.290692833264657,0.282328141245992,0.338458431566706,0.548783918618318,0.263069711437843,0.407412341537585,0,0.593175090620871,0.689531376628944,1.63692417267876,0.309873682371932,0.192906610981141,0,0.467863216890817,0.214871054048298,0.57386499620653,0.882365676478062,0.695603506861264 | |phase1_expression=1.92178616525753,4.53668029931169,5.0049916332849,0.90739263392049,1.00179145989269,2.51818907867835,2.10251376535973,0,0,0,0,0,0,0,0,0.607425802169478,0.699561878128147,0,0.274228867211478,0,0.850432901510698,0,0,0.799962113967033,1.37645568640302,2.29692785646008,3.01533397311352,1.50829862880122,3.23039813075836,1.76421090831952,0.886922042621219,0,0,0,2.88851619751275,2.32728503501889,3.47087905646027,2.09265815368454,0.7813353445238,0.523523743973798,1.17646297606203,0.683045484958446,0.971020706062307,5.66535680890098,6.79225439170748,5.32285581268876,0,0,0,0.194429899074283,0,0,0.167782606057736,0,0,0.771778308107841,1.71920063963254,1.03134418455488,0,0,0,0.338844532069132,0.889294796111139,0,0,1.4209602298922,0.599200221036809,0.384218305321555,0.207379224616955,0,0.210324961351382,0,0.220868540951614,0,0.0958454710182364,0,1.10115880999389,0.127687338085188,0,0,0.0914876436024097,0,0,0.56276261003168,0.763991238884051,0.294628585473668,0.142371680799103,0,0.075726193333184,0.302286240427142,4.34796733052517,0,0.679971333707751,0,0,0.448026887097336,1.12355536105401,4.09032774187339,1.81850203222008,1.41335829804136,1.12674735821344,5.13305909657271,2.54805239706646,0,0.432982082022428,0.760079596425296,1.51657333504435,0.91347103775248,2.33044095282455,2.52351636410202,0.346970653532272,0,0.922461989024234,0.904335843315735,0.470354828542819,0.753999547978053,0,2.02439099687876,0,0.323533699894818,0.441683036920787,0.969750506270444,3.72783522436244,0,0.209446706813455,4.59822699375465,0.479260498023681,0.599902730993408,0.127070227073065,1.04853447583376,0.457500602818626,0,0.521472960576829,0,0.20778804455956,0.324482526135515,0.101839363850316,0.995255764880744,0.758168275301024,0.841767423545896,0.390361328888111,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0,1.03481348295606,0,0,0.527853372491847,0,0.556094498451196,0.696504333044333,1.02891068203972,0.59710280045548,0.702213187313235,0.257347907114715,0.852490498186778,0,0,0.720248245844059,0,0,0.462801338662135,0,0.268273401399619,0,0.329119699826961,0.492502392237286,0.648550476366846,0.877199924551994,0.878200461164203,0.536825675041487,0.841159794256509,0.102904612379284,0.660837565967596,4.7601101999438,0,0.464473343720877,1.15980715189884,1.4117846723634,1.33426826306922,1.33157938278791,2.37264530772256,1.64698954724011,2.01068167040216,1.79060824837036,1.9496408711912,3.59527763461689,1.72910439899755,0.597423819763102,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.350679099451593,0.442655759869801,0.738050739898011,0,0.246794327843601,0.296452627087149,0,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0.575392274901621,0.162135226775035,0,1.43768206527355,0.744281895337007,0.624075346229121,0.252578877947112,0.358794827043824,0.482443521363367,3.69506380333209,0.189491411770485,0.488894929326078,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.472905432318573,0.8858587585951,0.637819074629948,1.96635977658886,0.690739927463582,1.44649058581512,1.50791283939272,2.17562273527484,0,0.827810238914197,0.80275294993896,0.117211686592203,0.819674726883377,0.252470927204373,0.315508219416257,0.390438744296638,0.861693590931196,0,0.891194696329576,0.283076530788832,0,0,1.18586333383957,0,1.13552068166615,0.35613120733451,1.14020871547503,2.3095817216155,2.65490276679926,0,0.302323556964751,0.377210159511796,0,0,0,0,0,0,0,0,3.40439605753788,0,0,0,0.709360934569094,0.713475270408282,0.987294123612726,0.608929898229199,0.469343416127421,0.21183207086382,0.220528398054962,2.63818004706368,0.484393280087717,0.241251699712623,0.716234064018819,1.31312719796049,2.04036585640896,0.927126510052548,0.683483523191411,0,0.370389054739423,0,0.683471138605126,0.686334519619568,0.169978429993855,0.559805809294632,0.138199973804424,0,0,0.813277868507395,0.972048067396211,1.67270636811575,2.18362563746178,1.61837215661785,2.47960367176008,2.35580347785627,1.8146096260851,3.10669656543463,0,0.149516546043979,0.165458490457098,0.388902376688095,0.129159823477731,0.675824501963113,0.352071715937262,0.13020438484395,0.943734099831398,0.483168241652012,0.864090018773596,1.26404448251271,1.01362607645082,1.74608627180206,0.909445760844565,0.895133478337407,0.79472541912506,0.480781798079875,0.590758108698309,1.11063094942962,0.457240839929999,0.504130925684203,0.682205165178267,0.384847366561318,1.05189211963412,4.98806843953465,0,0.0897138566094757,0,5.79568782096571,0.750729901804728,3.11357761254351,3.00115730710692,0,0,0,0,0.515559547031063,0.685082519770642,0.755393897389701,0,0,2.26571204492102,0,0,0.399024873401031,0,0.972426868273176,0.209613162627982,0,0.44449345560323,0,0,0,0.25347929989024,0.377252682772152,0.280924522409647,0.512201219238954,0.287177344778066,0,0.695305955669133,0.578727661391115,0.412085900803307,0.588795680537589,0.685738504770831,0.354951612318675,0.476872379894642,0.290692833264657,0.282328141245992,0.338458431566706,0.548783918618318,0.263069711437843,0.407412341537585,0,0.593175090620871,0.689531376628944,1.63692417267876,0.309873682371932,0.192906610981141,0,0.467863216890817,0.214871054048298,0.57386499620653,0.882365676478062,0.695603506861264 | ||
|short_description=p3@Alpk1 | |short_description=p3@Alpk1 | ||
}} | }} |
Revision as of 22:03, 13 November 2012
Short description: | p3@Alpk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Alpk1_5end |
Coexpression cluster: | NA |
Association with transcript: | 174bp_to_ENSMUST00000029662, ENSMUST00000161239_5end |
EntrezGene: | Alpk1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.90e-10 | 25 |
endo-epithelial cell | 5.90e-08 | 15 |
intestinal epithelial cell | 6.89e-08 | 9 |
epithelial cell of alimentary canal | 6.89e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.81e-17 | 31 |
gastrointestinal system | 1.17e-15 | 47 |
digestive system | 7.89e-11 | 116 |
digestive tract | 7.89e-11 | 116 |
primitive gut | 7.89e-11 | 116 |
subdivision of digestive tract | 1.37e-10 | 114 |
endoderm-derived structure | 2.05e-10 | 118 |
endoderm | 2.05e-10 | 118 |
presumptive endoderm | 2.05e-10 | 118 |
simple columnar epithelium | 3.70e-09 | 11 |
epithelium of mucosa | 6.89e-08 | 9 |
gastrointestinal system epithelium | 6.89e-08 | 9 |
intestinal epithelium | 6.89e-08 | 9 |
intestinal mucosa | 8.86e-08 | 13 |
wall of intestine | 8.86e-08 | 13 |
gastrointestinal system mucosa | 8.86e-08 | 13 |
mucosa | 1.29e-07 | 15 |
vessel | 2.38e-07 | 5 |
epithelial tube open at both ends | 2.38e-07 | 5 |
blood vessel | 2.38e-07 | 5 |
vasculature | 2.38e-07 | 5 |
vascular system | 2.38e-07 | 5 |
blood vasculature | 2.38e-07 | 5 |
vascular cord | 2.38e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.