Personal tools

FFCP PHASE1:Mm9::chr8:87238155..87238187,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr8:87238155..87238187,-
|id=chr8:87238155..87238187,-
|ontology_enrichment_celltype=CL:0000221!3.17e-16!44;CL:0000133!3.17e-16!44;CL:0002319!1.37e-15!43;CL:0000117!1.17e-12!23;CL:0000337!1.17e-12!23;CL:0000540!1.44e-12!33;CL:0000047!1.44e-12!33;CL:0000031!1.44e-12!33;CL:0000404!1.44e-12!33;CL:0000055!3.18e-11!50;CL:0000393!8.08e-09!39;CL:0000211!8.08e-09!39
|ontology_enrichment_celltype=CL:0000221!3.17e-16!44;CL:0000133!3.17e-16!44;CL:0002319!1.37e-15!43;CL:0000117!1.17e-12!23;CL:0000337!1.17e-12!23;CL:0000540!1.44e-12!33;CL:0000047!1.44e-12!33;CL:0000031!1.44e-12!33;CL:0000404!1.44e-12!33;CL:0000055!3.18e-11!50;CL:0000393!8.08e-09!39;CL:0000211!8.08e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000221,3.77e-23,44;CL:0000133,3.77e-23,44;CL:0002319,1.25e-21,43;CL:0000117,2.51e-18,23;CL:0000337,2.51e-18,23;CL:0002453,7.81e-16,8;CL:0002321,1.40e-12,70;CL:0000333,1.98e-12,10;CL:0000095,1.98e-12,10;CL:0000243,1.98e-12,10;CL:0000123,1.98e-12,10;CL:0000125,1.98e-12,10;CL:0000030,1.98e-12,10;CL:0000339,1.98e-12,10;CL:0000540,8.61e-12,33;CL:0000047,8.61e-12,33;CL:0000031,8.61e-12,33;CL:0000404,8.61e-12,33;CL:0000128,4.75e-11,6;CL:0000126,4.75e-11,6;CL:0000127,4.75e-11,6;CL:0002609,4.75e-11,6;CL:0000393,1.72e-09,39;CL:0000211,1.72e-09,39;CL:0002613,1.46e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.30e-18!73;UBERON:0005743!2.30e-18!73;UBERON:0000073!3.05e-17!75;UBERON:0001016!3.05e-17!75;UBERON:0004121!1.01e-12!102;UBERON:0000924!1.01e-12!102;UBERON:0006601!1.01e-12!102;UBERON:0001049!1.59e-12!52;UBERON:0005068!1.59e-12!52;UBERON:0006241!1.59e-12!52;UBERON:0007135!1.59e-12!52;UBERON:0000033!6.25e-10!63;UBERON:0000955!1.55e-09!50;UBERON:0006238!1.55e-09!50;UBERON:0002346!2.02e-09!71;UBERON:0003075!2.02e-09!71;UBERON:0007284!2.02e-09!71;UBERON:0002616!4.63e-09!49;UBERON:0003076!2.85e-07!12;UBERON:0003057!2.85e-07!12;UBERON:0003080!3.50e-07!40;UBERON:0003056!3.98e-07!49;UBERON:0002780!5.47e-07!39;UBERON:0001890!5.47e-07!39;UBERON:0006240!5.47e-07!39;UBERON:0002020!8.43e-07!34
|ontology_enrichment_uberon=UBERON:0001017!2.30e-18!73;UBERON:0005743!2.30e-18!73;UBERON:0000073!3.05e-17!75;UBERON:0001016!3.05e-17!75;UBERON:0004121!1.01e-12!102;UBERON:0000924!1.01e-12!102;UBERON:0006601!1.01e-12!102;UBERON:0001049!1.59e-12!52;UBERON:0005068!1.59e-12!52;UBERON:0006241!1.59e-12!52;UBERON:0007135!1.59e-12!52;UBERON:0000033!6.25e-10!63;UBERON:0000955!1.55e-09!50;UBERON:0006238!1.55e-09!50;UBERON:0002346!2.02e-09!71;UBERON:0003075!2.02e-09!71;UBERON:0007284!2.02e-09!71;UBERON:0002616!4.63e-09!49;UBERON:0003076!2.85e-07!12;UBERON:0003057!2.85e-07!12;UBERON:0003080!3.50e-07!40;UBERON:0003056!3.98e-07!49;UBERON:0002780!5.47e-07!39;UBERON:0001890!5.47e-07!39;UBERON:0006240!5.47e-07!39;UBERON:0002020!8.43e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.47e-21,73;UBERON:0001016,2.42e-20,75;UBERON:0001049,2.31e-18,52;UBERON:0005068,2.31e-18,52;UBERON:0006241,2.31e-18,52;UBERON:0007135,2.31e-18,52;UBERON:0004121,5.44e-16,95;UBERON:0000924,5.44e-16,95;UBERON:0006601,5.44e-16,95;UBERON:0000073,1.05e-15,54;UBERON:0002020,1.63e-15,34;UBERON:0002346,6.20e-14,64;UBERON:0003075,6.20e-14,64;UBERON:0007284,6.20e-14,64;UBERON:0002616,1.70e-13,46;UBERON:0000955,4.06e-13,47;UBERON:0006238,4.06e-13,47;UBERON:0010371,8.00e-13,73;UBERON:0003528,5.86e-12,29;UBERON:0002791,5.86e-12,29;UBERON:0001893,5.86e-12,29;UBERON:0002780,3.99e-11,39;UBERON:0001890,3.99e-11,39;UBERON:0006240,3.99e-11,39;UBERON:0003080,9.24e-11,40;UBERON:0001954,2.01e-09,7;UBERON:0003022,2.01e-09,7;UBERON:0002421,2.01e-09,7;UBERON:0000349,2.01e-09,7;UBERON:0002600,2.01e-09,7;UBERON:0003076,2.46e-09,12;UBERON:0003057,2.46e-09,12;UBERON:0010314,4.50e-09,92;UBERON:0003056,3.66e-08,49;UBERON:0000369,1.55e-07,5;UBERON:0002435,1.55e-07,5;UBERON:0000204,1.55e-07,5;UBERON:0010082,1.55e-07,5;UBERON:0002240,6.23e-07,6;UBERON:0005174,6.23e-07,6;UBERON:0001137,6.23e-07,6;UBERON:0000956,6.25e-07,21;UBERON:0001869,6.25e-07,21;UBERON:0000203,6.25e-07,21;UBERON:0002420,6.74e-07,8;UBERON:0007245,6.74e-07,8;UBERON:0010009,6.74e-07,8;UBERON:0010011,6.74e-07,8;UBERON:0000454,6.74e-07,8
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.81113203712009,7.90870257844099,9.3326351555656,1.25987779462826,4.31257693094915,0,0,0,0,0,0,1.61853168687678,0.528990979272033,1.90149421051854,0.677689064138264,0,0,0,0,5.39280198933128,9.98967593836042,7.25827286159344,7.2903206699113,7.15104868594699,3.42781181284564,0.662605622854841,2.20483438586917,2.49198224647415,0.919218786610021,0,0.127687338085188,0.46081959976873,1.45074916503213,1.46380229763855,1.56274011167028,0.558365998002762,1.12552522006336,0.15279824777681,2.35702868378934,1.99320353118744,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.433798070759735,0,1.61766849947409,0.220841518460394,0,0,0.878342391034642,1.04723353406728,0.255457055208591,0,0,0,0.299581278809645,0,1.13088916901578,0,0,0,0.162241263067758,0.611036183101898,0.622034853050465,1.0108910337347,0.841767423545896,0,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.187403449119458,0.776110112217047,0.215567992932842,0,0,0.43839146485515,0.834141747676794,0.348252166522167,1.23469281844766,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.697601834251224,0.268273401399619,0,0.329119699826961,0.656669856316381,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,3.49875682089567,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.38992817423824,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,1.13825766823663,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0.482443521363367,0,0,0.325929952884052,0.848725428875941,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0.44292937929755,0.478364305972461,0,0,0,0,0,0,0,1.9266070798535,0.586058432961016,0,0.504941854408746,0.631016438832513,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.963963949265421,0.141940085208269,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0.922305443831782,0,0.363533729477506,0,0,1.05418608574999,0,2.04263763452273,0.36012218806262,0.776152102696527,0.643011105094777,0.709360934569094,0.178368817602071,0.987294123612726,1.2178597964584,0,0,0,0,0,0.120625849856312,0.238744688006273,0.164140899745061,0,1.66882771809459,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0.436725127492355,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.583353565032143,0.129159823477731,0.337912250981556,0.117357238645754,0.5208175393758,0,0,0,0,0,0.410843828659309,0,0,0,0,0,0.302899349844443,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,1.04806581313991,0.735374033800057,0.888986911206461,0.412070114477788,0,0,0,0.377252682772152,0.37456602987953,0.640251524048693,0.287177344778066,0,1.0429589335037,0.578727661391115,0,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.423073039458382,1.09756783723664,0.526139422875686,0.543216455383447,0,0.474540072496697,0.394017929502254,0,0.154936841185966,0.578719832943424,0.749431733813838,0,0.214871054048298,0.191288332068843,0.882365676478062,1.62307484934295
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.81113203712009,7.90870257844099,9.3326351555656,1.25987779462826,4.31257693094915,0,0,0,0,0,0,1.61853168687678,0.528990979272033,1.90149421051854,0.677689064138264,0,0,0,0,5.39280198933128,9.98967593836042,7.25827286159344,7.2903206699113,7.15104868594699,3.42781181284564,0.662605622854841,2.20483438586917,2.49198224647415,0.919218786610021,0,0.127687338085188,0.46081959976873,1.45074916503213,1.46380229763855,1.56274011167028,0.558365998002762,1.12552522006336,0.15279824777681,2.35702868378934,1.99320353118744,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.433798070759735,0,1.61766849947409,0.220841518460394,0,0,0.878342391034642,1.04723353406728,0.255457055208591,0,0,0,0.299581278809645,0,1.13088916901578,0,0,0,0.162241263067758,0.611036183101898,0.622034853050465,1.0108910337347,0.841767423545896,0,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.187403449119458,0.776110112217047,0.215567992932842,0,0,0.43839146485515,0.834141747676794,0.348252166522167,1.23469281844766,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.697601834251224,0.268273401399619,0,0.329119699826961,0.656669856316381,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,3.49875682089567,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.38992817423824,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,1.13825766823663,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0.482443521363367,0,0,0.325929952884052,0.848725428875941,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0.44292937929755,0.478364305972461,0,0,0,0,0,0,0,1.9266070798535,0.586058432961016,0,0.504941854408746,0.631016438832513,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.963963949265421,0.141940085208269,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0.922305443831782,0,0.363533729477506,0,0,1.05418608574999,0,2.04263763452273,0.36012218806262,0.776152102696527,0.643011105094777,0.709360934569094,0.178368817602071,0.987294123612726,1.2178597964584,0,0,0,0,0,0.120625849856312,0.238744688006273,0.164140899745061,0,1.66882771809459,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0.436725127492355,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.583353565032143,0.129159823477731,0.337912250981556,0.117357238645754,0.5208175393758,0,0,0,0,0,0.410843828659309,0,0,0,0,0,0.302899349844443,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,1.04806581313991,0.735374033800057,0.888986911206461,0.412070114477788,0,0,0,0.377252682772152,0.37456602987953,0.640251524048693,0.287177344778066,0,1.0429589335037,0.578727661391115,0,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.423073039458382,1.09756783723664,0.526139422875686,0.543216455383447,0,0.474540072496697,0.394017929502254,0,0.154936841185966,0.578719832943424,0.749431733813838,0,0.214871054048298,0.191288332068843,0.882365676478062,1.62307484934295
|short_description=p13@Nfix
|short_description=p13@Nfix
}}
}}

Revision as of 19:26, 13 November 2012

Short description:p13@Nfix
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_13_at_Nfix_5end
Coexpression cluster:MCL_coexpression_mm9:1685
Association with transcript: -188bp_to_ENSMUST00000132236_5end
EntrezGene:Nfix
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p13@Nfix

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.81
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.91
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E89.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.26
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.29
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G13.50
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D51.14
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system4.47e-2173
nervous system2.42e-2075
neural tube2.31e-1852
neural rod2.31e-1852
future spinal cord2.31e-1852
neural keel2.31e-1852
ectoderm-derived structure5.44e-1695
ectoderm5.44e-1695
presumptive ectoderm5.44e-1695
regional part of nervous system1.05e-1554
gray matter1.63e-1534
neurectoderm6.20e-1464
neural plate6.20e-1464
presumptive neural plate6.20e-1464
regional part of brain1.70e-1346
brain4.06e-1347
future brain4.06e-1347
ecto-epithelium8.00e-1373
brain grey matter5.86e-1229
regional part of telencephalon5.86e-1229
telencephalon5.86e-1229
regional part of forebrain3.99e-1139
forebrain3.99e-1139
future forebrain3.99e-1139
anterior neural tube9.24e-1140
Ammon's horn2.01e-097
lobe parts of cerebral cortex2.01e-097
hippocampal formation2.01e-097
limbic system2.01e-097
limbic lobe2.01e-097
posterior neural tube2.46e-0912
chordal neural plate2.46e-0912
structure with developmental contribution from neural crest4.50e-0992
pre-chordal neural plate3.66e-0849
corpus striatum1.55e-075
striatum1.55e-075
ventral part of telencephalon1.55e-075
future corpus striatum1.55e-075
spinal cord6.23e-076
dorsal region element6.23e-076
dorsum6.23e-076
cerebral cortex6.25e-0721
cerebral hemisphere6.25e-0721
pallium6.25e-0721
basal ganglion6.74e-078
nuclear complex of neuraxis6.74e-078
aggregate regional part of brain6.74e-078
collection of basal ganglia6.74e-078
cerebral subcortex6.74e-078







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:87238155..87238187,-&oldid=2273337"