FFCP PHASE1:Mm9::chr7:133435987..133436002,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr7:133435987..133436002,+ | |id=chr7:133435987..133436002,+ | ||
|ontology_enrichment_celltype=CL:0002609!2.45e-07!6 | |ontology_enrichment_celltype=CL:0002609!2.45e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002613,3.89e-20,3;CL:0002609,1.07e-10,6;CL:0000117,1.24e-10,23;CL:0000337,1.24e-10,23;CL:0000540,1.46e-07,33;CL:0000047,1.46e-07,33;CL:0000031,1.46e-07,33;CL:0000404,1.46e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,6.34e-13,29;UBERON:0002791,6.34e-13,29;UBERON:0001893,6.34e-13,29;UBERON:0000369,1.62e-12,5;UBERON:0002435,1.62e-12,5;UBERON:0000204,1.62e-12,5;UBERON:0010082,1.62e-12,5;UBERON:0002616,8.56e-12,46;UBERON:0000955,1.50e-11,47;UBERON:0006238,1.50e-11,47;UBERON:0002020,4.32e-11,34;UBERON:0001049,1.77e-10,52;UBERON:0005068,1.77e-10,52;UBERON:0006241,1.77e-10,52;UBERON:0007135,1.77e-10,52;UBERON:0000073,4.19e-10,54;UBERON:0002780,1.01e-09,39;UBERON:0001890,1.01e-09,39;UBERON:0006240,1.01e-09,39;UBERON:0003080,1.73e-09,40;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0002420,3.41e-08,8;UBERON:0007245,3.41e-08,8;UBERON:0010009,3.41e-08,8;UBERON:0010011,3.41e-08,8;UBERON:0000454,3.41e-08,8;UBERON:0003056,8.18e-08,49;UBERON:0010371,1.48e-07,73;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75;UBERON:0000956,5.98e-07,21;UBERON:0001869,5.98e-07,21;UBERON:0000203,5.98e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.933206510776299,1.08004750665353,1.89292465216244,0,0,0.367472397644862,0.862609239164127,0.919218786610021,0,0.127687338085188,0,0.395658863190582,1.18933936683133,1.04182674111352,0,0,0,0,0.427115042397309,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693941307064543,0.304465478312141,0,0,0,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0.585561594023094,6.49284791121711,0.255457055208591,0,0,0,0.299581278809645,0,0.879580464790051,0,0.255715457330331,0,0,0.203678727700633,0.248813941220186,0,0,0.390361328888111,0,0.180062129805349,0.150704817835715,0.680364991513279,0.2562274405697,0.187403449119458,0,0.215567992932842,0,0.351902248327898,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0,0.292399974850665,0.219550115291051,0.134206418760372,0,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.432276099749388,0.398282546508734,0.189667900953082,0.228497025219458,0,0,0,0.280543279561274,0.126473074248515,0.147610147979602,0,0.493588655687202,0,0,0,0,0,0,0,0,0.648540907100142,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.776152102696527,0.857348140126369,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.58678619322877,0.39061315453185,0.314578033277133,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0.403304740547362,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.341467211508268,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0.231768651889711,0,0,0,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0,0,0.263069711437843,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.933206510776299,1.08004750665353,1.89292465216244,0,0,0.367472397644862,0.862609239164127,0.919218786610021,0,0.127687338085188,0,0.395658863190582,1.18933936683133,1.04182674111352,0,0,0,0,0.427115042397309,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693941307064543,0.304465478312141,0,0,0,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0.585561594023094,6.49284791121711,0.255457055208591,0,0,0,0.299581278809645,0,0.879580464790051,0,0.255715457330331,0,0,0.203678727700633,0.248813941220186,0,0,0.390361328888111,0,0.180062129805349,0.150704817835715,0.680364991513279,0.2562274405697,0.187403449119458,0,0.215567992932842,0,0.351902248327898,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0,0.292399974850665,0.219550115291051,0.134206418760372,0,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.432276099749388,0.398282546508734,0.189667900953082,0.228497025219458,0,0,0,0.280543279561274,0.126473074248515,0.147610147979602,0,0.493588655687202,0,0,0,0,0,0,0,0,0.648540907100142,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.776152102696527,0.857348140126369,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.58678619322877,0.39061315453185,0.314578033277133,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0.403304740547362,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.341467211508268,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0.231768651889711,0,0,0,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0,0,0.263069711437843,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr7:133435987..133436002,+ | |short_description=p@chr7:133435987..133436002,+ | ||
}} | }} |
Revision as of 12:48, 13 November 2012
Short description: | p@chr7:133435987..133436002, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:133435987..133436002, + |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 3.89e-20 | 3 |
neuron of cerebral cortex | 1.07e-10 | 6 |
CNS neuron (sensu Vertebrata) | 1.24e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.24e-10 | 23 |
neuron | 1.46e-07 | 33 |
neuronal stem cell | 1.46e-07 | 33 |
neuroblast | 1.46e-07 | 33 |
electrically signaling cell | 1.46e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 6.34e-13 | 29 |
regional part of telencephalon | 6.34e-13 | 29 |
telencephalon | 6.34e-13 | 29 |
corpus striatum | 1.62e-12 | 5 |
striatum | 1.62e-12 | 5 |
ventral part of telencephalon | 1.62e-12 | 5 |
future corpus striatum | 1.62e-12 | 5 |
regional part of brain | 8.56e-12 | 46 |
brain | 1.50e-11 | 47 |
future brain | 1.50e-11 | 47 |
gray matter | 4.32e-11 | 34 |
neural tube | 1.77e-10 | 52 |
neural rod | 1.77e-10 | 52 |
future spinal cord | 1.77e-10 | 52 |
neural keel | 1.77e-10 | 52 |
regional part of nervous system | 4.19e-10 | 54 |
regional part of forebrain | 1.01e-09 | 39 |
forebrain | 1.01e-09 | 39 |
future forebrain | 1.01e-09 | 39 |
anterior neural tube | 1.73e-09 | 40 |
neurectoderm | 1.41e-08 | 64 |
neural plate | 1.41e-08 | 64 |
presumptive neural plate | 1.41e-08 | 64 |
basal ganglion | 3.41e-08 | 8 |
nuclear complex of neuraxis | 3.41e-08 | 8 |
aggregate regional part of brain | 3.41e-08 | 8 |
collection of basal ganglia | 3.41e-08 | 8 |
cerebral subcortex | 3.41e-08 | 8 |
pre-chordal neural plate | 8.18e-08 | 49 |
ecto-epithelium | 1.48e-07 | 73 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |
cerebral cortex | 5.98e-07 | 21 |
cerebral hemisphere | 5.98e-07 | 21 |
pallium | 5.98e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.