FFCP PHASE1:Mm9::chr8:86773565..86773580,-: Difference between revisions
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|id=chr8:86773565..86773580,- | |id=chr8:86773565..86773580,- | ||
|ontology_enrichment_celltype=CL:0000144!2.33e-12!121;CL:0000012!2.33e-12!121;CL:0002371!7.91e-11!118;CL:0000034!4.86e-10!97;CL:0000548!1.67e-09!115;CL:0000004!1.67e-09!115;CL:0000255!1.67e-09!115;CL:0000723!2.51e-08!91;CL:0000048!2.51e-08!91;CL:0000219!3.16e-07!54;CL:0000063!3.43e-07!66 | |ontology_enrichment_celltype=CL:0000144!2.33e-12!121;CL:0000012!2.33e-12!121;CL:0002371!7.91e-11!118;CL:0000034!4.86e-10!97;CL:0000548!1.67e-09!115;CL:0000004!1.67e-09!115;CL:0000255!1.67e-09!115;CL:0000723!2.51e-08!91;CL:0000048!2.51e-08!91;CL:0000219!3.16e-07!54;CL:0000063!3.43e-07!66 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.26e-11,97;CL:0000988,2.26e-09,32;CL:0002032,2.26e-09,32;CL:0000037,2.26e-09,32;CL:0000837,2.26e-09,32;CL:0000723,2.29e-09,91;CL:0000048,2.29e-09,91;CL:0000791,2.72e-09,9;CL:0000789,2.72e-09,9;CL:0002420,2.72e-09,9;CL:0002419,2.72e-09,9;CL:0000790,2.72e-09,9;CL:0002320,3.43e-09,46;CL:0000134,3.43e-09,46;CL:0000219,5.80e-09,54;CL:0000624,2.94e-08,8;CL:0000838,3.83e-08,12;CL:0000738,4.16e-08,17;CL:0002087,4.16e-08,17;CL:0000542,2.65e-07,13;CL:0000051,2.65e-07,13;CL:0000084,3.68e-07,11;CL:0000827,3.68e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.43e-09,46 | |||
|phase1_expression=2.7225304007815,2.09385244583617,0.454999239389536,0.90739263392049,0.500895729946347,0.671517087647559,0.700837921786577,4.00282302668886,32.6629835391867,64.6018092648702,1.02730780935303,1.43589886191606,2.56801094896809,3.67165690159789,0.666219523631325,0.404950534779652,0,0.630924330716475,0.822686601634433,2.12194825899015,0.765389611359628,0.794327609607082,0.783599367416806,0.159992422793407,0.45881856213434,1.72269589234506,1.29228598847722,0.861884930743556,0,0.756090389279792,0.443461021310609,0.635030673459631,0,0,0.577703239502549,0.831173226792462,0.204169356262369,11.3003540298965,12.5013655123808,4.71171369576418,24.1174910092716,24.589637458504,11.6522484727477,0.377690453926732,0.405507724878058,0.550640256485045,3.9119567217402,0.65407546914134,1.09843091367236,0.388859798148567,0.419959264876088,1.43752564364972,9.73139115134871,10.1550699881588,9.07453257684653,0.771778308107841,0.573066879877513,0.515672092277442,0.606949382578793,0.528990979272033,0.633831403506179,1.69422266034566,1.77858959222228,0.449949858640699,0,0.7104801149461,1.19840044207362,1.53687322128622,0.311068836925433,0.675029691658453,0.210324961351382,3.71346279724945,3.3130281142742,0,0.479227355091182,0,3.30347642998166,1.40456071893706,2.15049146558741,0.659431438650969,0.640413505216868,0.52091337055676,1.95428099300967,1.68828783009504,1.06958773443767,1.76777151284201,1.70846016958924,1.3047961207771,0.908714319998209,0.982430281388212,4.05810284182349,0.860423876981386,2.03991400112325,1.07940638327563,0,0,0.561777680527007,0.681721290312231,1.03914401841148,0.35333957451034,0.704217098883403,1.28326477414318,2.54805239706646,0,0.216491041011214,0.253359865475099,1.01104889002957,0.34255163915718,0,0.742210695324124,0.520455980298408,0.913396434936424,0.922461989024234,0.60289056221049,0.940709657085638,0.502666365318702,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0.41889341362691,0.255457055208591,26.4791425158084,18.5969846607956,24.2704133709554,0.299581278809645,0,0.251308704225729,0.173824320192276,0.511430914660661,0.41557608911912,0.648965052271031,0.916554274652847,0.373220911830279,0,0,0.650602214813519,0,0.540186389416048,0.90422890701429,0.204109497453984,0.12811372028485,0.281105173679186,0.258703370739016,0.646703978798527,0.567318240503458,0.527853372491847,0.657587197282725,0.556094498451196,4.87553033131033,4.7329891373827,0.59710280045548,3.51106593656617,7.72043721344146,9.66155897945015,0.621377317606506,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0.329119699826961,0.32833492815819,0.324275238183423,0.292399974850665,0,0.134206418760372,1.05144974282064,0.720332286654991,0,0,0.639864751605702,0.232236671860439,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0.685491075658373,0,0.610953983535943,0,0.561086559122548,0.0632365371242573,0.590440591918409,0,0.370191491765402,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0.823684239564244,0,0.372140947668503,0.312037673114561,0.252578877947112,0.538192240565737,0,0.369506380333209,0.947457058852424,0.488894929326078,0.169745085775188,0,0,0,0.390267295715598,0.157635144106191,0.664394068946325,0.159454768657487,0.491589944147214,0.172684981865896,0.144649058581512,1.50791283939272,0,0,0.551873492609465,0.481651769963376,1.75817529888305,0.491804836130026,0.252470927204373,0.631016438832513,0,0.430846795465598,0.716906393857656,0.668396022247182,0.283076530788832,0.404810701674894,0.876767573733936,1.58115111178609,0.642642632843614,0.141940085208269,1.24645922567079,0.977321756121456,0.329940245945071,0,0.485561272309963,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0.646793418913773,0.214337035031592,0.354680467284547,0.178368817602071,0.658196082408484,0.608929898229199,4.69343416127421,6.56679419677843,0.441056796109924,3.46261131177108,6.45857706783622,6.21223126760005,5.96861720015682,2.1338316966858,0,0.741701208042039,0,0.619160603889667,0,0.376736914009382,0,0,43.8544349384147,49.9626684795459,37.8667928224121,0.954670618015114,0.316335993581135,0.203319467126849,0,0.418176592028937,1.52853794622324,0.539457385539283,0.495920734352016,0.523511883968059,0,0.621339313086926,0.56369293868419,0.598066184175915,0.827292452285488,0.972255941720238,1.54991788173277,0.844780627453891,0.821500670520278,1.3020438484395,3.04092098834561,2.17425708743405,2.88030006257865,0.316011120628178,0.405450430580328,0.102710957164827,1.03936658382236,0.179026695667481,0.39736270956253,0.721172697119813,0.443068581523732,0.706765149637033,0.533447646584999,0.504130925684203,0,0.288635524920988,0.467507608726276,0.453460767230423,0.443971906748129,1.52513556236109,0.839423081820392,0,0.750729901804728,0.36630324853453,0.857473516316263,0,1.12950368523413,1.38097570952153,1.7186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|phase1_expression=2.7225304007815,2.09385244583617,0.454999239389536,0.90739263392049,0.500895729946347,0.671517087647559,0.700837921786577,4.00282302668886,32.6629835391867,64.6018092648702,1.02730780935303,1.43589886191606,2.56801094896809,3.67165690159789,0.666219523631325,0.404950534779652,0,0.630924330716475,0.822686601634433,2.12194825899015,0.765389611359628,0.794327609607082,0.783599367416806,0.159992422793407,0.45881856213434,1.72269589234506,1.29228598847722,0.861884930743556,0,0.756090389279792,0.443461021310609,0.635030673459631,0,0,0.577703239502549,0.831173226792462,0.204169356262369,11.3003540298965,12.5013655123808,4.71171369576418,24.1174910092716,24.589637458504,11.6522484727477,0.377690453926732,0.405507724878058,0.550640256485045,3.9119567217402,0.65407546914134,1.09843091367236,0.388859798148567,0.419959264876088,1.43752564364972,9.73139115134871,10.1550699881588,9.07453257684653,0.771778308107841,0.573066879877513,0.515672092277442,0.606949382578793,0.528990979272033,0.633831403506179,1.69422266034566,1.77858959222228,0.449949858640699,0,0.7104801149461,1.19840044207362,1.53687322128622,0.311068836925433,0.675029691658453,0.210324961351382,3.71346279724945,3.3130281142742,0,0.479227355091182,0,3.30347642998166,1.40456071893706,2.15049146558741,0.659431438650969,0.640413505216868,0.52091337055676,1.95428099300967,1.68828783009504,1.06958773443767,1.76777151284201,1.70846016958924,1.3047961207771,0.908714319998209,0.982430281388212,4.05810284182349,0.860423876981386,2.03991400112325,1.07940638327563,0,0,0.561777680527007,0.681721290312231,1.03914401841148,0.35333957451034,0.704217098883403,1.28326477414318,2.54805239706646,0,0.216491041011214,0.253359865475099,1.01104889002957,0.34255163915718,0,0.742210695324124,0.520455980298408,0.913396434936424,0.922461989024234,0.60289056221049,0.940709657085638,0.502666365318702,0.494389935468748,0.289198713839823,0,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0.41889341362691,0.255457055208591,26.4791425158084,18.5969846607956,24.2704133709554,0.299581278809645,0,0.251308704225729,0.173824320192276,0.511430914660661,0.41557608911912,0.648965052271031,0.916554274652847,0.373220911830279,0,0,0.650602214813519,0,0.540186389416048,0.90422890701429,0.204109497453984,0.12811372028485,0.281105173679186,0.258703370739016,0.646703978798527,0.567318240503458,0.527853372491847,0.657587197282725,0.556094498451196,4.87553033131033,4.7329891373827,0.59710280045548,3.51106593656617,7.72043721344146,9.66155897945015,0.621377317606506,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0.329119699826961,0.32833492815819,0.324275238183423,0.292399974850665,0,0.134206418760372,1.05144974282064,0.720332286654991,0,0,0.639864751605702,0.232236671860439,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0.685491075658373,0,0.610953983535943,0,0.561086559122548,0.0632365371242573,0.590440591918409,0,0.370191491765402,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0.823684239564244,0,0.372140947668503,0.312037673114561,0.252578877947112,0.538192240565737,0,0.369506380333209,0.947457058852424,0.488894929326078,0.169745085775188,0,0,0,0.390267295715598,0.157635144106191,0.664394068946325,0.159454768657487,0.491589944147214,0.172684981865896,0.144649058581512,1.50791283939272,0,0,0.551873492609465,0.481651769963376,1.75817529888305,0.491804836130026,0.252470927204373,0.631016438832513,0,0.430846795465598,0.716906393857656,0.668396022247182,0.283076530788832,0.404810701674894,0.876767573733936,1.58115111178609,0.642642632843614,0.141940085208269,1.24645922567079,0.977321756121456,0.329940245945071,0,0.485561272309963,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0.646793418913773,0.214337035031592,0.354680467284547,0.178368817602071,0.658196082408484,0.608929898229199,4.69343416127421,6.56679419677843,0.441056796109924,3.46261131177108,6.45857706783622,6.21223126760005,5.96861720015682,2.1338316966858,0,0.741701208042039,0,0.619160603889667,0,0.376736914009382,0,0,43.8544349384147,49.9626684795459,37.8667928224121,0.954670618015114,0.316335993581135,0.203319467126849,0,0.418176592028937,1.52853794622324,0.539457385539283,0.495920734352016,0.523511883968059,0,0.621339313086926,0.56369293868419,0.598066184175915,0.827292452285488,0.972255941720238,1.54991788173277,0.844780627453891,0.821500670520278,1.3020438484395,3.04092098834561,2.17425708743405,2.88030006257865,0.316011120628178,0.405450430580328,0.102710957164827,1.03936658382236,0.179026695667481,0.39736270956253,0.721172697119813,0.443068581523732,0.706765149637033,0.533447646584999,0.504130925684203,0,0.288635524920988,0.467507608726276,0.453460767230423,0.443971906748129,1.52513556236109,0.839423081820392,0,0.750729901804728,0.36630324853453,0.857473516316263,0,1.12950368523413,1.38097570952153,1.7186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| ||
|short_description=p2@D8Ertd738e | |short_description=p2@D8Ertd738e | ||
}} | }} | ||
Revision as of 11:46, 13 November 2012
| Short description: | p2@D8Ertd738e |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_D8Ertd738e_5end |
| Coexpression cluster: | MCL_coexpression_mm9:374 |
| Association with transcript: | 79bp_to_uc009mmh.2_5end |
| EntrezGene: | D8Ertd738e |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| stem cell | 2.26e-11 | 97 |
| hematopoietic cell | 2.26e-09 | 32 |
| hematopoietic oligopotent progenitor cell | 2.26e-09 | 32 |
| hematopoietic stem cell | 2.26e-09 | 32 |
| hematopoietic multipotent progenitor cell | 2.26e-09 | 32 |
| somatic stem cell | 2.29e-09 | 91 |
| multi fate stem cell | 2.29e-09 | 91 |
| mature alpha-beta T cell | 2.72e-09 | 9 |
| alpha-beta T cell | 2.72e-09 | 9 |
| immature T cell | 2.72e-09 | 9 |
| mature T cell | 2.72e-09 | 9 |
| immature alpha-beta T cell | 2.72e-09 | 9 |
| connective tissue cell | 3.43e-09 | 46 |
| mesenchymal cell | 3.43e-09 | 46 |
| motile cell | 5.80e-09 | 54 |
| CD4-positive, alpha-beta T cell | 2.94e-08 | 8 |
| lymphoid lineage restricted progenitor cell | 3.83e-08 | 12 |
| leukocyte | 4.16e-08 | 17 |
| nongranular leukocyte | 4.16e-08 | 17 |
| lymphocyte | 2.65e-07 | 13 |
| common lymphoid progenitor | 2.65e-07 | 13 |
| T cell | 3.68e-07 | 11 |
| pro-T cell | 3.68e-07 | 11 |
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 3.43e-09 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
