UBERON:0003323: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0003323
|name=mesenchyme of upper jaw
|namespace=
|def="A mesenchyme that is part of a upper jaw [Obol]." [OBOL:automatic]
|xref=EHDAA:8031;;EHDAA2:00...") |
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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Revision as of 17:18, 15 June 2012
| Name: | mesenchyme of upper jaw | ||
|---|---|---|---|
| Definition: | "A mesenchyme that is part of a upper jaw [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"mesenchyme of palatoquadrate arch" EXACT [OBOL:automatic] "palatoquadrate arch mesenchyme" EXACT [OBOL:automatic] "upper jaw mesenchyme" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003104(mesenchyme) |
|---|---|
| part_of: | UBERON:0001709(upper jaw region) |
Children
| is a: | UBERON:0005705 (primary palate mesenchyme) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003323 (mesenchyme of upper jaw), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_28635acd2eaa1c9511b2aa7f936b9448 | p14@C17orf67 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_28635acd2eaa1c9511b2aa7f936b9448 | p14@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_9bb8b10a213c6689fd8e703199815dec | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_9bb8b10a213c6689fd8e703199815dec | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_9bb8b10a213c6689fd8e703199815dec | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_9bb8b10a213c6689fd8e703199815dec | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_9bb8b10a213c6689fd8e703199815dec | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_9bb8b10a213c6689fd8e703199815dec | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_9bb8b10a213c6689fd8e703199815dec | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_9bb8b10a213c6689fd8e703199815dec | p12@C17orf67 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_bb7de7f92a9987d2e230ab1e7d8273a9 | p@chr5:75912402..75912418, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:151503647..151503656,+#_bb7de7f92a9987d2e230ab1e7d8273a9 | p14@MAB21L2 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:151503647..151503656,+#_bb7de7f92a9987d2e230ab1e7d8273a9 | p14@MAB21L2 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_bb7de7f92a9987d2e230ab1e7d8273a9 | p@chr5:75912402..75912418, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:151505582..151505614,+#_8945826718652e3824260a49726f7a08 | p@chr4:151505582..151505614, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:151505582..151505614,+#_8945826718652e3824260a49726f7a08 | p@chr4:151505582..151505614, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr3:157823323..157823328,+#_af1f4c83a82a3486ff837f3a61dd4b06 | p17@RSRC1 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_af1f4c83a82a3486ff837f3a61dd4b06 | p@chr8:57354278..57354286, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr17:54893196..54893207,-#_af1f4c83a82a3486ff837f3a61dd4b06 | p9@C17orf67 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_af1f4c83a82a3486ff837f3a61dd4b06 | p@chr8:57354278..57354286, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr17:54893196..54893207,-#_af1f4c83a82a3486ff837f3a61dd4b06 | p9@C17orf67 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr3:157823323..157823328,+#_af1f4c83a82a3486ff837f3a61dd4b06 | p17@RSRC1 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr8:57802672..57802682,-#_2640cf6fdfbde0ed7e31452d996972cb | p@chr8:57802672..57802682, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr8:57802672..57802682,-#_2640cf6fdfbde0ed7e31452d996972cb | p@chr8:57802672..57802682, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr12:85673913..85673919,+#_af6ff18d31b9b24f589e1ec6e432397c | p7@ALX1 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr5:75913767..75913778,-#_af6ff18d31b9b24f589e1ec6e432397c | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:76930661..76930674,+#_af6ff18d31b9b24f589e1ec6e432397c | p1@AK123925 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr12:85673913..85673919,+#_af6ff18d31b9b24f589e1ec6e432397c | p7@ALX1 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr5:75913767..75913778,-#_af6ff18d31b9b24f589e1ec6e432397c | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:76930661..76930674,+#_af6ff18d31b9b24f589e1ec6e432397c | p1@AK123925 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_57d7c9b3bd2006081eefe967d0d99f36 | p@chr2:33519090..33519092, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr13:28961248..28961262,-#_57d7c9b3bd2006081eefe967d0d99f36 | p23@FLT1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr2:33519090..33519092,+#_57d7c9b3bd2006081eefe967d0d99f36 | p@chr2:33519090..33519092, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr13:28961248..28961262,-#_57d7c9b3bd2006081eefe967d0d99f36 | p23@FLT1 |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_da6bbd730252693f7229f40b00debd72 | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353779..57353790,-#_da6bbd730252693f7229f40b00debd72 | p@chr8:57353779..57353790, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353666..57353675,-#_da6bbd730252693f7229f40b00debd72 | p@chr8:57353666..57353675, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353779..57353790,-#_da6bbd730252693f7229f40b00debd72 | p@chr8:57353779..57353790, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_da6bbd730252693f7229f40b00debd72 | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353666..57353675,-#_da6bbd730252693f7229f40b00debd72 | p@chr8:57353666..57353675, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr20:49253452..49253461,-#_8bc495f6d9f7f5e494944fcb297e0120 | p12@FAM65C |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:75600308..75600316,+#_8bc495f6d9f7f5e494944fcb297e0120 | p8@LHX8 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:6615391..6615401,+#_8bc495f6d9f7f5e494944fcb297e0120 | p2@TAS1R1 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:75600308..75600316,+#_8bc495f6d9f7f5e494944fcb297e0120 | p8@LHX8 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr20:49253452..49253461,-#_8bc495f6d9f7f5e494944fcb297e0120 | p12@FAM65C |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:6615391..6615401,+#_8bc495f6d9f7f5e494944fcb297e0120 | p2@TAS1R1 |
| 2.21e-40 | FFCP PHASE1:Hg19::chr5:75912831..75912842,-#_202276053b38d5269cd5d0ecd74f2144 | p@chr5:75912831..75912842, - |
| 2.21e-40 | FFCP PHASE1:Hg19::chr16:67687543..67687559,-#_202276053b38d5269cd5d0ecd74f2144 | p@chr16:67687543..67687559, - |
| 2.21e-40 | FFCP PHASE2:Hg19::chr5:75912831..75912842,-#_202276053b38d5269cd5d0ecd74f2144 | p@chr5:75912831..75912842, - |
| 2.21e-40 | FFCP PHASE2:Hg19::chr16:67687543..67687559,-#_202276053b38d5269cd5d0ecd74f2144 | p@chr16:67687543..67687559, - |
| 3.3e-40 | FFCP PHASE1:Hg19::chr6:46190219..46190230,-#_4ec876403d002b4dec4b4135b8bbd46d | p@chr6:46190219..46190230, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr9:125165007..125165016,+#_4ec876403d002b4dec4b4135b8bbd46d | p@chr9:125165007..125165016, + |
| 3.3e-40 | FFCP PHASE2:Hg19::chr6:46190219..46190230,-#_4ec876403d002b4dec4b4135b8bbd46d | p@chr6:46190219..46190230, - |
| 3.3e-40 | FFCP PHASE1:Hg19::chr9:125165007..125165016,+#_4ec876403d002b4dec4b4135b8bbd46d | p@chr9:125165007..125165016, + |
| 1.84e-34 | FFCP PHASE1:Hg19::chr4:8594472..8594473,+#_ad2ba4833510dc6e0d3a3b8e7a5fb75f | p4@CPZ |
| 1.84e-34 | FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_ad2ba4833510dc6e0d3a3b8e7a5fb75f | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr4:8594472..8594473,+#_ad2ba4833510dc6e0d3a3b8e7a5fb75f | p4@CPZ |
| 1.84e-34 | FFCP PHASE1:Hg19::chr8:57359557..57359570,-#_ad2ba4833510dc6e0d3a3b8e7a5fb75f | p5@PENK |
| 1.84e-34 | FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_ad2ba4833510dc6e0d3a3b8e7a5fb75f | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr8:57359557..57359570,-#_ad2ba4833510dc6e0d3a3b8e7a5fb75f | p5@PENK |
| 2.58e-34 | FFCP PHASE1:Hg19::chr14:61125018..61125037,-#_2da0e59bf1d5f2b97264541bdcc04e45 | p9@SIX1 |
| 2.58e-34 | FFCP PHASE2:Hg19::chr14:61125018..61125037,-#_2da0e59bf1d5f2b97264541bdcc04e45 | p9@SIX1 |
| 5.05e-34 | FFCP PHASE2:Hg19::chr6:134327986..134327991,-#_2568c8e85a02c9ca2cd1886c3cd87a43 | p@chr6:134327986..134327991, - |
| 5.05e-34 | FFCP PHASE1:Hg19::chr6:134327986..134327991,-#_2568c8e85a02c9ca2cd1886c3cd87a43 | p@chr6:134327986..134327991, - |
| 7.06e-34 | FFCP PHASE1:Hg19::chr8:57353676..57353688,-#_520c53de7de2b76d1a1724a2817ee6c5 | p@chr8:57353676..57353688, - |
| 7.06e-34 | FFCP PHASE2:Hg19::chr13:58291223..58291226,+#_520c53de7de2b76d1a1724a2817ee6c5 | p@chr13:58291223..58291226, + |
| 7.06e-34 | FFCP PHASE2:Hg19::chr8:57353676..57353688,-#_520c53de7de2b76d1a1724a2817ee6c5 | p@chr8:57353676..57353688, - |
| 7.06e-34 | FFCP PHASE1:Hg19::chr13:58291223..58291226,+#_520c53de7de2b76d1a1724a2817ee6c5 | p@chr13:58291223..58291226, + |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_11ec1f58c6c207b48d1eb1c6ae277bc5 | p12@FBN2 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:19721484..19721507,-#_11ec1f58c6c207b48d1eb1c6ae277bc5 | p@chr5:19721484..19721507, - |
| 9.85e-34 | FFCP PHASE1:Hg19::chrX:133792540..133792551,-#_11ec1f58c6c207b48d1eb1c6ae277bc5 | p4@PLAC1 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_11ec1f58c6c207b48d1eb1c6ae277bc5 | p12@FBN2 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:19721484..19721507,-#_11ec1f58c6c207b48d1eb1c6ae277bc5 | p@chr5:19721484..19721507, - |
| 9.85e-34 | FFCP PHASE2:Hg19::chrX:133792540..133792551,-#_11ec1f58c6c207b48d1eb1c6ae277bc5 | p4@PLAC1 |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_8daa6bcb495e13c8ee1aab865de3b8e9 | p@chr8:57353804..57353821, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_8daa6bcb495e13c8ee1aab865de3b8e9 | p@chr8:57354360..57354367, + |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_8daa6bcb495e13c8ee1aab865de3b8e9 | p@chr8:57353804..57353821, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_8daa6bcb495e13c8ee1aab865de3b8e9 | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_8daa6bcb495e13c8ee1aab865de3b8e9 | p@chr8:57354360..57354367, + |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_8daa6bcb495e13c8ee1aab865de3b8e9 | p@chr8:57353982..57353991, - |
| 9.99e-30 | FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_70e28576279e89ec039b5e07d20547bb | p10@ITGA8 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr3:157824322..157824334,-#_70e28576279e89ec039b5e07d20547bb | p7@SHOX2 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_70e28576279e89ec039b5e07d20547bb | p10@ITGA8 |
| 9.99e-30 | FFCP PHASE2:Hg19::chr3:157824322..157824334,-#_70e28576279e89ec039b5e07d20547bb | p7@SHOX2 |
| 1.33e-29 | FFCP PHASE1:Hg19::chrX:132670143..132670152,-#_b703f2c7e95eb19e57b5a7adf7ffbb6c | p@chrX:132670143..132670152, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr17:79071218..79071221,-#_b703f2c7e95eb19e57b5a7adf7ffbb6c | p@chr17:79071218..79071221, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr22:28193943..28193956,-#_b703f2c7e95eb19e57b5a7adf7ffbb6c | p@chr22:28193943..28193956, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chrX:132670143..132670152,-#_b703f2c7e95eb19e57b5a7adf7ffbb6c | p@chrX:132670143..132670152, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr17:79071218..79071221,-#_b703f2c7e95eb19e57b5a7adf7ffbb6c | p@chr17:79071218..79071221, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr22:28193943..28193956,-#_b703f2c7e95eb19e57b5a7adf7ffbb6c | p@chr22:28193943..28193956, - |
| 1.78e-29 | FFCP PHASE1:Hg19::chr1:21904551..21904569,-#_488bed99401103bebb37676a81172843 | p@chr1:21904551..21904569, - |
| 1.78e-29 | FFCP PHASE2:Hg19::chr1:21904551..21904569,-#_488bed99401103bebb37676a81172843 | p@chr1:21904551..21904569, - |
| 3.16e-29 | FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_04da9138d3b6940bf3bf9ee977ada00e | p@chr8:57359975..57359992, - |
| 3.16e-29 | FFCP PHASE1:Hg19::chr1:156470861..156470868,-#_04da9138d3b6940bf3bf9ee977ada00e | p18@MEF2D |
| 3.16e-29 | FFCP PHASE1:Hg19::chr14:89044406..89044416,+#_04da9138d3b6940bf3bf9ee977ada00e | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_04da9138d3b6940bf3bf9ee977ada00e | p@chr8:57359975..57359992, - |
| 3.16e-29 | FFCP PHASE2:Hg19::chr1:156470861..156470868,-#_04da9138d3b6940bf3bf9ee977ada00e | p18@MEF2D |
| 3.16e-29 | FFCP PHASE2:Hg19::chr14:89044406..89044416,+#_04da9138d3b6940bf3bf9ee977ada00e | p@chr14:89044406..89044416, + |
| 4.2e-29 | FFCP PHASE2:Hg19::chr4:151503350..151503358,+#_8f57fc24614143d18cefd77b04bd7785 | p11@MAB21L2 |
| 4.2e-29 | FFCP PHASE1:Hg19::chr1:6615468..6615485,+#_8f57fc24614143d18cefd77b04bd7785 | p1@TAS1R1 |
